Factsheet for Zm00001d000017_P001

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 6
endoplasmic reticulum 5
vacuole 4
plasma membrane 4
golgi 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	secretory
iPSORT:	secretory
MultiLoc:	endoplasmic reticulum
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	extracellular
YLoc:	extracellular

extracellular: 20408568

msms PMID: 20408568 doi

W Ma, N Muthreich, C Liao, M Franz-Wachtel, W Schütz, F Zhang, F Hochholdinger, C Li

Department of Plant Nutrition, China Agricultural University, Beijing, PR China.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d000012_P001	Maize	extracellular	96.9	96.48
EES13464	Sorghum	extracellular	94.69	94.69
Zm00001d000018_P001	Maize	extracellular	93.81	93.81
Os12t0155000-01	Rice	cytosol, extracellular, vacuole	71.68	83.08
Os12t0154800-01	Rice	extracellular	82.74	81.66
Os12t0154700-01	Rice	extracellular	81.86	80.79
Os12t0154900-00	Rice	extracellular	80.97	79.91
Zm00001d049438_P001	Maize	extracellular	75.66	77.03
Zm00001d049427_P001	Maize	extracellular, plastid	77.43	76.75
Zm00001d049432_P001	Maize	extracellular, plastid	77.43	76.75
Zm00001d049433_P001	Maize	extracellular	77.43	76.75
Zm00001d049436_P001	Maize	extracellular, plastid	77.43	76.75
Zm00001d000006_P001	Maize	extracellular	76.11	76.44
Zm00001d049420_P001	Maize	extracellular	76.99	76.32
Zm00001d049431_P001	Maize	extracellular, plastid	76.99	76.32
Zm00001d049428_P001	Maize	extracellular, plastid	76.99	75.98
Zm00001d049435_P001	Maize	extracellular	76.99	75.98
Zm00001d049430_P001	Maize	extracellular, plastid	76.55	75.88
Zm00001d049437_P001	Maize	extracellular	76.55	75.88
Zm00001d049426_P001	Maize	plastid	53.54	75.62
VIT_14s0128g01040.t01	Wine grape	peroxisome	41.15	75.61
Zm00001d049423_P001	Maize	extracellular	76.55	75.55
Zm00001d049419_P001	Maize	extracellular	76.11	75.44
Zm00001d049421_P001	Maize	extracellular, plastid	76.11	75.11
Zm00001d049418_P001	Maize	extracellular	75.66	75.0
Zm00001d049439_P001	Maize	cytosol, peroxisome, plastid	47.35	74.83
GSMUA_Achr5P26730_001	Banana	extracellular, vacuole	68.58	71.43
GSMUA_Achr5P26750_001	Banana	extracellular, vacuole	68.58	71.43
GSMUA_Achr5P26690_001	Banana	extracellular, vacuole	61.06	70.77
GSMUA_Achr5P26710_001	Banana	cytosol	62.83	70.65
GSMUA_Achr5P26760_001	Banana	extracellular, vacuole	67.7	70.51
VIT_14s0006g02360.t01	Wine grape	cytosol, plastid	60.62	66.83
Zm00001d004401_P001	Maize	extracellular	66.37	66.37
VIT_14s0060g02700.t01	Wine grape	cytosol	61.5	65.57
VIT_14s0060g02730.t01	Wine grape	peroxisome	59.73	65.22
Zm00001d025059_P001	Maize	extracellular	65.49	65.2
Zm00001d053249_P001	Maize	extracellular, vacuole	62.83	65.14
VIT_14s0006g02330.t01	Wine grape	extracellular, vacuole	63.27	64.71
VIT_14s0006g02420.t01	Wine grape	extracellular, vacuole	63.27	64.71
VIT_14s0006g02380.t01	Wine grape	extracellular	62.39	64.68
VIT_16s0039g02920.t01	Wine grape	plastid	52.65	64.67
VIT_14s0060g02760.t01	Wine grape	extracellular, vacuole	62.83	64.55
VIT_14s0128g00990.t01	Wine grape	extracellular, vacuole	62.83	64.55
VIT_14s0128g01030.t01	Wine grape	extracellular, vacuole	62.83	64.55
VIT_14s0006g02350.t01	Wine grape	extracellular	62.83	64.25
VIT_14s0006g02370.t01	Wine grape	extracellular	62.83	64.25
VIT_14s0006g02440.t01	Wine grape	extracellular, vacuole	62.83	64.25
VIT_14s0006g02430.t01	Wine grape	extracellular	61.95	64.22
VIT_14s0060g02750.t01	Wine grape	extracellular, vacuole	62.39	64.09
VIT_14s0128g00980.t01	Wine grape	extracellular, vacuole	62.39	64.09
VIT_14s0006g02390.t01	Wine grape	extracellular	62.39	63.8
GSMUA_Achr5P26700_001	Banana	extracellular	50.44	63.69
VIT_14s0128g01020.t01	Wine grape	extracellular, vacuole	61.95	63.64
VIT_16s0013g00010.t01	Wine grape	extracellular	63.27	63.56
VIT_16s0013g00060.t01	Wine grape	extracellular	63.27	63.56
VIT_14s0060g02710.t01	Wine grape	extracellular, vacuole	55.31	63.45
VIT_14s0128g00920.t01	Wine grape	extracellular, vacuole	61.95	63.35
VIT_14s0060g02690.t01	Wine grape	extracellular	61.5	63.18
VIT_14s0128g01000.t01	Wine grape	extracellular, vacuole	62.83	63.11
VIT_16s0039g02860.t01	Wine grape	extracellular	62.83	63.11
VIT_14s0128g01010.t01	Wine grape	extracellular, vacuole	61.06	62.73
VIT_10s0003g05300.t01	Wine grape	extracellular, vacuole	58.85	61.86
VIT_14s0128g00650.t01	Wine grape	extracellular	60.18	61.82
KRG92599	Soybean	extracellular	60.62	61.71
PGSC0003DMT400046992	Potato	extracellular	61.95	61.4
Solyc01g102900.2.1	Tomato	extracellular	61.95	61.4
VIT_12s0059g00720.t01	Wine grape	plastid	42.92	61.39
KRG94046	Soybean	extracellular	49.12	61.33
VIT_12s0059g00730.t01	Wine grape	extracellular	58.41	61.11
KRG94454	Soybean	extracellular	59.73	61.09
KRG94457	Soybean	extracellular	59.73	61.09
PGSC0003DMT400053423	Potato	extracellular	61.5	60.96
VIT_14s0128g00690.t01	Wine grape	extracellular, plasma membrane, vacuole	60.62	60.89
KRG94060	Soybean	extracellular	59.29	60.63
KRG94062	Soybean	extracellular	59.29	60.63
KRG94063	Soybean	extracellular	59.29	60.63
KRG94068	Soybean	extracellular	59.29	60.63
KRG94455	Soybean	extracellular	59.29	60.63
PGSC0003DMT400040093	Potato	extracellular	61.06	60.53
CDY66959	Canola	extracellular	58.41	60.27
KRH07002	Soybean	extracellular	58.85	60.18
KRH07003	Soybean	extracellular	58.85	60.18
KRH42281	Soybean	extracellular	57.08	60.0
VIT_10s0003g05260.t01	Wine grape	extracellular	57.08	59.72
VIT_10s0003g05250.t01	Wine grape	extracellular	56.64	59.53
KRH34184	Soybean	extracellular	61.06	59.48
Solyc10g078840.1.1	Tomato	extracellular	57.08	59.45
CDY11695	Canola	endoplasmic reticulum, extracellular, vacuole	57.52	59.36
VIT_16s0013g00090.t01	Wine grape	extracellular, vacuole	59.73	59.21
KRH07001	Soybean	extracellular	57.52	59.09
KRH11811	Soybean	extracellular	56.19	59.07
KRH58405	Soybean	vacuole	56.19	59.07
PGSC0003DMT400029687	Potato	extracellular	56.64	58.99
PGSC0003DMT400029689	Potato	extracellular	56.64	58.99
CDY36876	Canola	extracellular	57.08	58.64
KRH34183	Soybean	extracellular	51.33	58.59
Bra028467.1-P	Field mustard	endoplasmic reticulum, extracellular, vacuole	56.64	58.45
CDY69099	Canola	endoplasmic reticulum, extracellular, vacuole	56.64	58.45
KRG94458	Soybean	extracellular	56.64	58.45
KRG92598	Soybean	extracellular	59.73	58.19
Bra039727.1-P	Field mustard	extracellular	56.64	58.18
CDY36875	Canola	extracellular, vacuole	56.64	58.18
CDY53728	Canola	extracellular	56.64	58.18
AT5G39110.1	Thale cress	endoplasmic reticulum, extracellular, vacuole	57.08	58.11
KRG94453	Soybean	extracellular	54.42	58.02
AT5G39120.1	Thale cress	extracellular	56.64	57.92
AT5G39150.1	Thale cress	extracellular	56.64	57.92
AT5G39180.1	Thale cress	extracellular	56.64	57.92
KRH07007	Soybean	extracellular	56.64	57.92
AT5G38930.1	Thale cress	extracellular	57.08	57.85
PGSC0003DMT400046891	Potato	extracellular	58.85	57.83
KRH36828	Soybean	extracellular	55.31	57.6
AT5G38960.1	Thale cress	extracellular	56.64	57.4
PGSC0003DMT400046879	Potato	cytosol, extracellular, plastid, vacuole	42.92	57.4
Solyc10g078850.1.1	Tomato	extracellular	53.1	57.14
CDY69461	Canola	extracellular	48.23	57.07
PGSC0003DMT400046887	Potato	extracellular	57.96	56.96
Bra027979.1-P	Field mustard	extracellular	49.56	56.85
CDX95190	Canola	extracellular	49.56	56.85
AT4G14630.1	Thale cress	extracellular	55.75	56.76
AT3G05950.1	Thale cress	extracellular, plasma membrane, vacuole	57.08	56.33
AT5G39160.1	Thale cress	extracellular, vacuole	54.87	55.86
AT5G39190.1	Thale cress	extracellular, vacuole	54.87	55.86
Bra028225.1-P	Field mustard	extracellular, vacuole	54.87	55.86
CDX74487	Canola	extracellular, vacuole	54.87	55.86
CDY37880	Canola	extracellular	54.87	55.86
KRH07008	Soybean	extracellular, plasma membrane, vacuole	53.1	55.81
Bra020560.1-P	Field mustard	endoplasmic reticulum, extracellular, vacuole	54.42	55.16
CDX99669	Canola	vacuole	54.42	55.16
CDY05545	Canola	endoplasmic reticulum, extracellular, vacuole	54.42	55.16
CDY15957	Canola	vacuole	54.42	55.16
AT5G39130.1	Thale cress	extracellular	53.98	54.95
KRG94695	Soybean	nucleus	51.33	54.72
Bra030358.1-P	Field mustard	endoplasmic reticulum, extracellular, vacuole	53.98	54.71
VIT_14s0128g00970.t01	Wine grape	vacuole	61.5	54.3
Bra028424.1-P	Field mustard	extracellular, vacuole	52.65	54.09
CDX67421	Canola	extracellular, vacuole	52.65	54.09
Bra040243.1-P	Field mustard	extracellular, plasma membrane, vacuole	53.98	53.28
CDY18834	Canola	extracellular, plasma membrane, vacuole	53.98	53.28
AT3G04200.1	Thale cress	extracellular, vacuole	53.1	52.86
Bra025428.1-P	Field mustard	cytosol, extracellular, vacuole	58.41	52.59
AT5G38940.2	Thale cress	plastid	57.08	52.23
KRG94061	Soybean	extracellular, plasma membrane, vacuole	47.35	51.94
PGSC0003DMT400044231	Potato	extracellular	50.88	51.34
Solyc09g089990.2.1	Tomato	extracellular	50.44	50.89
AT3G04190.1	Thale cress	extracellular, vacuole	47.79	48.65
AT3G04180.1	Thale cress	extracellular, vacuole	47.35	48.2
AT3G04170.1	Thale cress	extracellular, vacuole	48.23	48.02
CDX99677	Canola	extracellular, vacuole	58.41	48.0
Zm00001d002295_P001	Maize	extracellular	53.98	46.39
Bra001097.1-P	Field mustard	extracellular, plasma membrane, vacuole	46.9	45.49
Solyc09g090040.2.1	Tomato	extracellular	45.58	45.18
PGSC0003DMT400044224	Potato	extracellular	44.25	44.44
CDX74197	Canola	cytosol, extracellular, plastid, vacuole	37.17	43.3
AT3G04150.2	Thale cress	extracellular, vacuole	46.02	42.98
GSMUA_AchrUn_...	Banana	endoplasmic reticulum, extracellular, vacuole	69.47	36.85
PGSC0003DMT400087849	Potato	extracellular	57.08	30.07

Protein Annotations

EntrezGene:103641113	Gene3D:2.60.120.10	MapMan:35.1	UniProt:A0A1X7YDW0	InterPro:Cupin_1	GO:GO:0003674
GO:GO:0005488	GO:GO:0005575	GO:GO:0005576	GO:GO:0030145	GO:GO:0045735	GO:GO:0046872
InterPro:Germin	InterPro:Germin_Mn-BS	InterPro:IPR014710	PFAM:PF00190	PRINTS:PR00325	ScanProsite:PS00725
PANTHER:PTHR31238	PANTHER:PTHR31238:SF94	InterPro:RmlC-like_jellyroll	InterPro:RmlC_Cupin_sf	SMART:SM00835	SUPFAM:SSF51182
SignalP:SignalP-noTM	UniParc:UPI00022166F8	EnsemblPlantsGene:Zm00001d000017	EnsemblPlants:Zm00001d000017_P001	EnsemblPlants:Zm00001d000017_T001	SEG:seg

Description

Germin-like protein

Coordinates

chrB73V4_ctg150:+:1171438..1172477

Molecular Weight (calculated)

24686.6 Da

IEP (calculated)

6.670

GRAVY (calculated)

0.001

Length

226 amino acids

Sequence
(BLAST)

001: MASSSFYLLS VLLIVIASCA WATDPSPLQD FCVADKESPV RVNGFPCKDV KDVKVDDFFL AADLDKPRDT TMSKVKSNVT LINVMKLAGL NTLGISMARI
101: DYAPQGQNPP HTHPRATEIL TVLEGSLYVG FVTSNPDNKF ISKLLNKGDV FVFPQGLIHF QFNPSHDKPA VAIAALNSQN PGAITISNAV FGSKPPIADN
201: VLAKAFQVDK KVVDWLQAQF WEDNHN

Best Arabidopsis Sequence Match ( AT3G05950.1 )
(BLAST)

001: MEGFLRFLVA KAILLALASS FVSCYDPSPL QDFCVAVDDA SGVFVNGKFC KDPKYVKAED FFTSGLNIAG NTINRVGSNV TNVNVDKIPG LNTLGVSLVR
101: IDFAPGGQNP PHTHPRATEI LVVVEGTLLV GFVTSNQDNN RLFSKVLYPG DVFVFPIGMI HFQVNVGRTN AVAFAGLGSQ NPGTITIADA VFGSKPSIMP
201: EILAKAFQLD VNVVKYLEAR FSSNYDRHY

Arabidopsis Description

Germin-like protein subfamily 1 member 7 [Source:UniProtKB/Swiss-Prot;Acc:Q9SFF9]
SUBAcon: [plasma membrane,extracellular,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.