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Thale cress
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Thale cress
Subcellular Localization
min:
: max

 
Winner_takes_all: extracellular, vacuole

Predictor Summary:
  • endoplasmic reticulum 5
  • golgi 5
  • extracellular 6
  • vacuole 5
  • plasma membrane 4
  • plastid 1
Predictors GFP MS/MS Papers
Winner Takes All:extracellular, vacuole
Any Predictor:plastid, secretory
BaCelLo:endoplasmic reticulum, extracellular, golgi
iPSORT:secretory
MultiLoc:vacuole
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:plastid
YLoc:extracellular
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
AT3G05950.1 Thale cress extracellular, plasma membrane, vacuole 68.72 68.12
PGSC0003DMT400046879 Potato cytosol, extracellular, plastid, vacuole 46.7 62.72
VIT_14s0128g00690.t01 Wine grape extracellular, plasma membrane, vacuole 61.23 61.78
AT5G39110.1 Thale cress endoplasmic reticulum, extracellular, vacuole 60.35 61.71
KRG92599 Soybean extracellular 60.35 61.71
AT5G39150.1 Thale cress extracellular 59.47 61.09
AT5G39180.1 Thale cress extracellular 59.47 61.09
AT3G04180.1 Thale cress extracellular, vacuole 59.47 60.81
AT3G04190.1 Thale cress extracellular, vacuole 59.47 60.81
AT5G39120.1 Thale cress extracellular 59.03 60.63
AT3G04170.1 Thale cress extracellular, vacuole 60.35 60.35
GSMUA_Achr5P26710_001 Banana cytosol 53.3 60.2
AT5G38930.1 Thale cress extracellular 59.03 60.09
PGSC0003DMT400040093 Potato extracellular 60.35 60.09
GSMUA_Achr5P26690_001 Banana extracellular, vacuole 51.54 60.0
AT5G39160.1 Thale cress extracellular, vacuole 58.59 59.91
AT5G39190.1 Thale cress extracellular, vacuole 58.59 59.91
GSMUA_Achr8P33360_001 Banana extracellular 57.27 59.91
TraesCS1A01G053000.1 Wheat extracellular 56.39 59.53
TraesCSU01G007100.1 Wheat extracellular 56.39 59.53
AT4G14630.1 Thale cress extracellular 58.15 59.46
GSMUA_Achr5P26760_001 Banana extracellular, vacuole 56.83 59.45
PGSC0003DMT400046992 Potato extracellular 59.47 59.21
Solyc01g102900.2.1 Tomato extracellular 59.47 59.21
AT5G38960.1 Thale cress extracellular 58.15 59.19
GSMUA_Achr8P33400_001 Banana extracellular 49.78 59.16
KRH34184 Soybean extracellular 60.35 59.05
GSMUA_Achr5P26730_001 Banana extracellular, vacuole 56.39 58.99
GSMUA_Achr5P26750_001 Banana extracellular, vacuole 56.39 58.99
GSMUA_Achr8P33370_001 Banana extracellular 56.39 58.72
GSMUA_AchrUn_... Banana extracellular 56.39 58.72
PGSC0003DMT400046891 Potato extracellular 59.47 58.7
AT3G04150.2 Thale cress extracellular, vacuole 62.56 58.68
KRH07001 Soybean extracellular 56.83 58.64
KRG92598 Soybean extracellular 59.91 58.62
HORVU1Hr1G010600.1 Barley extracellular, vacuole 55.51 58.6
TraesCS1B01G070100.1 Wheat extracellular, vacuole 55.51 58.6
TraesCS1D01G054600.1 Wheat extracellular 55.51 58.6
AT5G39130.1 Thale cress extracellular 57.27 58.56
TraesCS2A01G370100.1 Wheat extracellular, vacuole 48.9 58.42
KRH07002 Soybean extracellular 56.83 58.37
KRH07003 Soybean extracellular 56.83 58.37
PGSC0003DMT400053423 Potato extracellular 58.59 58.33
TraesCS1A01G053100.1 Wheat extracellular, vacuole 55.07 58.14
TraesCS1B01G069500.1 Wheat extracellular, vacuole 55.07 58.14
TraesCS1B01G069800.1 Wheat extracellular, vacuole 55.07 58.14
TraesCSU01G006900.1 Wheat extracellular 55.07 58.14
KRG94458 Soybean extracellular 55.95 57.99
KRH07007 Soybean extracellular 56.39 57.92
GSMUA_Achr8P33390_001 Banana extracellular 55.51 57.8
TraesCS1D01G054400.1 Wheat extracellular 54.63 57.67
TraesCS2B01G387100.1 Wheat extracellular, vacuole 54.63 57.67
TraesCS2D01G366500.1 Wheat extracellular, vacuole 54.63 57.67
KRH34183 Soybean extracellular 50.22 57.58
KRG94060 Soybean extracellular 55.95 57.47
KRG94062 Soybean extracellular 55.95 57.47
KRG94063 Soybean extracellular 55.95 57.47
KRG94068 Soybean extracellular 55.95 57.47
KRG94046 Soybean extracellular 45.81 57.46
HORVU1Hr1G010740.1 Barley extracellular 55.51 57.27
KRH07008 Soybean extracellular, plasma membrane, vacuole 54.19 57.21
TraesCS1A01G052600.1 Wheat extracellular, vacuole 54.19 57.21
TraesCS1B01G070300.1 Wheat extracellular, vacuole 54.19 57.21
EES05073 Sorghum extracellular 54.63 57.14
EES05075 Sorghum extracellular 54.63 57.14
TraesCS7D01G460500.1 Wheat extracellular 56.83 57.08
PGSC0003DMT400046887 Potato extracellular 57.71 56.96
Os08t0189500-01 Rice extracellular 56.39 56.89
TraesCS7B01G351800.1 Wheat extracellular 54.63 56.88
Zm00001d049438_P001 Maize extracellular 55.51 56.76
EES05074 Sorghum extracellular 54.19 56.68
TraesCS3A01G012500.1 Wheat extracellular 56.39 56.64
TraesCS7A01G473600.1 Wheat extracellular 56.39 56.64
TraesCS7B01G374800.1 Wheat extracellular 56.39 56.64
TraesCS7B01G374900.1 Wheat extracellular 56.39 56.64
KRG94695 Soybean nucleus 52.86 56.6
Zm00001d049419_P001 Maize extracellular 56.83 56.58
KRG94454 Soybean extracellular 55.07 56.56
KRG94455 Soybean extracellular 55.07 56.56
KRG94457 Soybean extracellular 55.07 56.56
Os02t0491600-00 Rice extracellular 53.74 56.48
HORVU1Hr1G010710.1 Barley vacuole 55.95 56.44
TraesCS7A01G452000.1 Wheat extracellular 54.19 56.42
TraesCS7B01G351600.1 Wheat extracellular 54.19 56.42
TraesCS7D01G440600.1 Wheat extracellular 54.19 56.42
TraesCS7D01G440700.1 Wheat extracellular 54.19 56.42
EES14666 Sorghum extracellular 56.39 56.39
TraesCS1A01G052700.1 Wheat extracellular, vacuole 53.3 56.28
EES05072 Sorghum extracellular 53.74 56.22
EES13474 Sorghum extracellular 56.39 56.14
Zm00001d049418_P001 Maize extracellular 56.39 56.14
Zm00001d049431_P001 Maize extracellular, plastid 56.39 56.14
KRG94453 Soybean extracellular 52.42 56.13
TraesCS7A01G451800.1 Wheat extracellular 53.74 55.96
TraesCS7D01G440900.1 Wheat extracellular 53.74 55.96
TraesCS7D01G441000.1 Wheat extracellular 53.74 55.96
GSMUA_Achr5P26700_001 Banana extracellular 44.05 55.87
Os08t0189850-01 Rice extracellular 55.07 55.8
TraesCS3A01G012400.1 Wheat extracellular 55.51 55.75
TraesCS3D01G011000.1 Wheat extracellular 55.51 55.75
KXG24637 Sorghum extracellular 55.95 55.7
OQU80011 Sorghum extracellular 55.95 55.7
OQU80014 Sorghum extracellular 55.95 55.7
OQU80017 Sorghum extracellular 55.95 55.7
OQU80021 Sorghum extracellular 55.95 55.7
OQU80024 Sorghum extracellular 55.95 55.7
TraesCS3D01G010900.1 Wheat extracellular 55.95 55.7
Zm00001d049420_P001 Maize extracellular 55.95 55.7
Zm00001d049432_P001 Maize extracellular, plastid 55.95 55.7
Zm00001d049433_P001 Maize extracellular 55.95 55.7
Zm00001d049437_P001 Maize extracellular 55.95 55.7
HORVU7Hr1G102000.2 Barley extracellular, vacuole 54.19 55.66
Os08t0189100-01 Rice extracellular 54.19 55.66
Os02t0491700-00 Rice extracellular 54.63 55.61
TraesCS7B01G351700.1 Wheat extracellular 53.3 55.5
HORVU3Hr1G002000.1 Barley extracellular 55.95 55.46
TraesCS3A01G012600.1 Wheat extracellular 55.95 55.46
TraesCS3D01G010800.1 Wheat extracellular 55.95 55.46
Zm00001d049421_P001 Maize extracellular, plastid 55.95 55.46
Os08t0189700-01 Rice extracellular 54.63 55.36
TraesCS3D01G011100.1 Wheat extracellular 55.07 55.31
EES13478 Sorghum extracellular 55.51 55.26
Zm00001d049427_P001 Maize extracellular, plastid 55.51 55.26
Zm00001d049436_P001 Maize extracellular, plastid 55.51 55.26
OQU80013 Sorghum cytosol, extracellular, peroxisome 48.02 55.05
TraesCS7B01G351500.1 Wheat extracellular 52.86 55.05
Zm00001d049423_P001 Maize extracellular 55.51 55.02
Zm00001d049435_P001 Maize extracellular 55.51 55.02
TraesCS6A01G033500.1 Wheat extracellular 53.3 55.0
Os08t0189400-01 Rice extracellular 54.19 54.91
Os08t0189900-01 Rice extracellular 54.19 54.91
Os08t0190100-01 Rice extracellular 54.19 54.91
TraesCS7A01G473400.1 Wheat extracellular 54.63 54.87
Zm00001d049430_P001 Maize extracellular, plastid 55.07 54.82
EES05076 Sorghum extracellular 52.86 54.79
Os02t0491800-00 Rice extracellular 53.74 54.71
HORVU1Hr1G010640.1 Barley extracellular, vacuole 51.54 54.67
Zm00001d000006_P001 Maize extracellular 54.19 54.67
AT5G38940.2 Thale cress plastid 59.47 54.66
TraesCS1D01G054500.1 Wheat extracellular, vacuole 44.49 54.59
Zm00001d053249_P001 Maize extracellular, vacuole 52.42 54.59
Zm00001d049428_P001 Maize extracellular, plastid 55.07 54.59
Os08t0189600-01 Rice extracellular 53.74 54.22
TraesCS4B01G377900.1 Wheat extracellular 54.63 54.15
TraesCSU01G128000.1 Wheat extracellular 54.63 54.15
TraesCS7A01G451700.1 Wheat extracellular 51.98 54.13
EES13464 Sorghum extracellular 53.74 53.98
Zm00001d000018_P001 Maize extracellular 53.74 53.98
Zm00001d049426_P001 Maize plastid 37.89 53.75
Os12t0154800-01 Rice extracellular 54.19 53.71
TraesCS5A01G543700.1 Wheat extracellular 54.19 53.71
TraesCS5A01G543900.1 Wheat extracellular 54.19 53.71
TraesCS5A01G545200.1 Wheat extracellular 54.19 53.71
TraesCSU01G127900.1 Wheat extracellular 54.19 53.71
TraesCSU01G128400.1 Wheat extracellular 54.19 53.71
TraesCSU01G145500.1 Wheat extracellular 54.19 53.71
TraesCSU01G145600.1 Wheat extracellular 54.19 53.71
TraesCS6D01G039000.1 Wheat extracellular 51.98 53.64
HORVU7Hr1G101990.1 Barley extracellular 52.86 53.57
Os12t0155000-01 Rice cytosol, extracellular, vacuole 45.81 53.33
TraesCS4B01G376900.1 Wheat extracellular 52.86 53.33
TraesCS5A01G543600.1 Wheat extracellular 52.86 53.33
Os12t0154700-01 Rice extracellular 53.74 53.28
TraesCS4B01G377500.1 Wheat extracellular 53.74 53.28
TraesCS5A01G544200.1 Wheat extracellular 53.74 53.28
TraesCS5A01G545400.1 Wheat extracellular 53.74 53.28
TraesCSU01G128500.1 Wheat extracellular 53.74 53.28
TraesCSU01G128700.1 Wheat golgi 53.74 53.28
TraesCSU01G128800.1 Wheat extracellular 53.74 53.28
TraesCSU01G222000.1 Wheat extracellular 53.74 53.28
TraesCSU01G238600.1 Wheat extracellular 53.74 53.28
TraesCSU01G253400.1 Wheat extracellular 53.74 53.28
Os08t0231400-01 Rice extracellular 52.42 53.12
Zm00001d000017_P001 Maize extracellular 52.86 53.1
EES13468 Sorghum extracellular 53.3 53.07
EES13470 Sorghum extracellular 53.3 53.07
OQU80018 Sorghum extracellular 53.3 53.07
OQU80022 Sorghum extracellular 53.3 53.07
EES05077 Sorghum extracellular, vacuole 50.66 53.0
KRG94061 Soybean extracellular, plasma membrane, vacuole 48.02 52.91
HORVU0Hr1G009460.4 Barley extracellular 53.3 52.84
Os12t0154900-00 Rice extracellular 53.3 52.84
TraesCS4B01G377100.1 Wheat extracellular 53.3 52.84
TraesCS4B01G377200.1 Wheat extracellular 53.3 52.84
TraesCS4B01G377300.1 Wheat extracellular 53.3 52.84
TraesCS4B01G377400.1 Wheat extracellular 53.3 52.84
TraesCS4B01G378000.1 Wheat extracellular 53.3 52.84
TraesCSU01G128100.1 Wheat extracellular 53.3 52.84
TraesCSU01G128600.1 Wheat extracellular 53.3 52.84
TraesCSU01G145300.1 Wheat extracellular 53.3 52.84
TraesCSU01G145700.1 Wheat extracellular 53.3 52.84
TraesCSU01G150700.1 Wheat extracellular 53.3 52.84
TraesCSU01G151900.1 Wheat extracellular 53.3 52.84
TraesCSU01G152000.1 Wheat extracellular 53.3 52.84
TraesCSU01G161300.1 Wheat extracellular 53.3 52.84
TraesCS4B01G376700.1 Wheat extracellular 29.52 52.76
TraesCS6B01G047200.1 Wheat extracellular 51.1 52.73
Os08t0189300-01 Rice extracellular 51.98 52.68
Os08t0188900-01 Rice plastid 50.66 52.51
Zm00001d000012_P001 Maize extracellular 52.42 52.42
Zm00001d025059_P001 Maize extracellular 52.42 52.42
EES11809 Sorghum extracellular 52.86 52.4
HORVU4Hr1G090120.1 Barley extracellular 52.86 52.4
TraesCS4B01G377000.1 Wheat extracellular 52.86 52.4
TraesCS4B01G377800.1 Wheat extracellular 52.86 52.4
HORVU0Hr1G009450.1 Barley extracellular 53.3 52.38
TraesCS5B01G048500.1 Wheat extracellular 51.98 52.21
TraesCS5D01G054300.1 Wheat extracellular 51.98 52.21
TraesCS2B01G083400.1 Wheat extracellular, vacuole 40.53 51.98
TraesCS5A01G543800.1 Wheat extracellular 52.42 51.97
TraesCS5A01G544000.1 Wheat extracellular 52.42 51.97
TraesCS5A01G544500.1 Wheat extracellular 52.42 51.97
TraesCSU01G128300.1 Wheat extracellular 52.42 51.97
Zm00001d004401_P001 Maize extracellular 51.54 51.77
Zm00001d049439_P001 Maize cytosol, peroxisome, plastid 32.6 51.75
EES13475 Sorghum extracellular 48.9 51.63
TraesCSU01G245800.1 Wheat extracellular 50.66 51.57
Os08t0189200-01 Rice extracellular 51.1 51.56
TraesCS5A01G544400.1 Wheat extracellular 51.98 51.53
Solyc09g089990.2.1 Tomato extracellular 50.66 51.34
GSMUA_Achr9P30640_001 Banana extracellular, vacuole 52.86 51.28
HORVU5Hr1G010880.2 Barley extracellular 51.54 51.09
TraesCS4B01G377700.1 Wheat extracellular 48.46 50.93
PGSC0003DMT400044231 Potato extracellular 50.22 50.89
HORVU3Hr1G001990.1 Barley extracellular, plastid, vacuole 56.39 50.59
HORVU0Hr1G009470.2 Barley plastid 53.74 50.41
TraesCS5A01G044300.1 Wheat extracellular 51.54 49.79
TraesCSU01G152900.1 Wheat extracellular 50.22 49.78
TraesCS3B01G075600.1 Wheat extracellular 49.78 49.78
TraesCS3B01G075700.1 Wheat endoplasmic reticulum, extracellular 49.78 49.78
HORVU4Hr1G090130.1 Barley endoplasmic reticulum, extracellular, plastid 53.74 49.59
HORVU3Hr1G011990.3 Barley extracellular 50.66 49.57
TraesCS7B01G289600.1 Wheat endoplasmic reticulum, extracellular 50.66 48.94
TraesCS7D01G383300.1 Wheat extracellular 50.66 48.94
TraesCS7A01G386800.1 Wheat endoplasmic reticulum, extracellular 50.22 48.51
HORVU7Hr1G091800.1 Barley endoplasmic reticulum, extracellular, plastid 49.78 48.09
TraesCS1B01G069900.1 Wheat extracellular 55.51 47.55
TraesCS1B01G069600.1 Wheat extracellular 55.07 47.17
GSMUA_Achr8P33380_001 Banana extracellular 45.81 46.22
TraesCSU01G152800.1 Wheat plastid 52.86 46.15
EES12867 Sorghum extracellular, vacuole 52.86 45.63
HORVU2Hr1G104240.1 Barley extracellular 52.86 45.63
TraesCS2B01G481600.1 Wheat extracellular, vacuole 52.86 45.63
PGSC0003DMT400044224 Potato extracellular 44.93 45.33
TraesCS2A01G459900.1 Wheat extracellular, vacuole 52.42 45.25
TraesCS2D01G460200.1 Wheat extracellular, vacuole 52.42 45.25
Solyc09g090040.2.1 Tomato extracellular 45.37 45.18
TraesCS2D01G460100.1 Wheat vacuole 53.3 44.81
TraesCS2A01G459800.1 Wheat vacuole 52.86 44.44
HORVU2Hr1G104220.1 Barley extracellular 52.42 44.24
Zm00001d002295_P001 Maize extracellular 51.1 44.11
TraesCS2B01G481500.1 Wheat vacuole 52.42 44.07
TraesCS4B01G378400.1 Wheat plastid 53.74 44.04
TraesCS4B01G378200.1 Wheat plastid 53.74 43.57
HORVU4Hr1G090190.4 Barley extracellular 53.3 43.21
GSMUA_AchrUn_... Banana endoplasmic reticulum, extracellular, vacuole 57.27 30.52
Protein Annotations
Gene3D:2.60.120.10MapMan:35.1EntrezGene:819575ProteinID:AAF26793.1ProteinID:AEE74052.1ArrayExpress:AT3G04200
EnsemblPlantsGene:AT3G04200RefSeq:AT3G04200TAIR:AT3G04200RefSeq:AT3G04200-TAIR-GEnsemblPlants:AT3G04200.1TAIR:AT3G04200.1
Unigene:At.40882EMBL:BT002896EMBL:BT004466InterPro:Cupin_1GO:GO:0003674GO:GO:0005488
GO:GO:0005575GO:GO:0005576GO:GO:0005618GO:GO:0005623GO:GO:0030145GO:GO:0030312
GO:GO:0045735GO:GO:0046872GO:GO:0048046InterPro:GerminInterPro:Germin_Mn-BSInterPro:IPR014710
RefSeq:NP_187070.1PFAM:PF00190PO:PO:0000293PO:PO:0001016PO:PO:0007115PO:PO:0007123
PO:PO:0009005PO:PO:0009025PO:PO:0009047PO:PO:0025281PRINTS:PR00325ScanProsite:PS00725
PFscan:PS51257PANTHER:PTHR31238PANTHER:PTHR31238:SF93UniProt:Q9M8X6InterPro:RmlC-like_jellyrollInterPro:RmlC_Cupin_sf
SMART:SM00835SUPFAM:SSF51182SignalP:SignalP-noTMUniParc:UPI000000BE24SEG:seg:
Description
Germin-like protein subfamily 1 member 6 [Source:UniProtKB/Swiss-Prot;Acc:Q9M8X6]
Coordinates
chr3:-:1103616..1104614
Molecular Weight (calculated)
24922.4 Da
IEP (calculated)
10.259
GRAVY (calculated)
0.215
Length
227 amino acids
Sequence
(BLAST)
001: MMEVLLRLLV TQVILLALAT SFVSCYDPNP LQDFCVAASE TNRVFVNGKF CKDPKSVTAN DFSYSGLNIA RNTTNFLGSN VTTVDVNKIP GLNTLGVSLA
101: RLDFAQGGQN PPHIHPRATE ILVVTKGKLL VGFVSSNQDN NRLFYKVLKR GDVFVFPIGL IHFQMNVRRT RAVAFAGFGS QNPGTIRIAD AVFGSNPSIP
201: QEVLAKAFQL DVKLVRFLHI VFGPPLW
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.