Factsheet for TraesCS3A01G012400.1

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 7
endoplasmic reticulum 4
vacuole 4
plasma membrane 4
golgi 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	secretory
iPSORT:	secretory
MultiLoc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	extracellular
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3D01G011000.1	Wheat	extracellular	97.79	97.79
HORVU3Hr1G002000.1	Barley	extracellular	95.58	94.32
TraesCS3A01G012600.1	Wheat	extracellular	93.81	92.58
TraesCS7A01G473600.1	Wheat	extracellular	88.94	88.94
TraesCS3A01G012500.1	Wheat	extracellular	88.5	88.5
TraesCS7A01G473400.1	Wheat	extracellular	88.5	88.5
TraesCS5A01G543900.1	Wheat	extracellular	82.3	81.22
TraesCS5A01G545200.1	Wheat	extracellular	82.3	81.22
TraesCS5A01G543600.1	Wheat	extracellular	80.53	80.89
TraesCS5A01G543700.1	Wheat	extracellular	81.86	80.79
TraesCS5A01G544200.1	Wheat	extracellular	80.97	79.91
TraesCS5A01G545400.1	Wheat	extracellular	80.97	79.91
EES14666	Sorghum	extracellular	80.09	79.74
TraesCS5A01G543800.1	Wheat	extracellular	80.53	79.48
TraesCS5A01G544000.1	Wheat	extracellular	80.09	79.04
TraesCS5A01G544400.1	Wheat	extracellular	79.65	78.6
TraesCS5A01G544500.1	Wheat	extracellular	79.65	78.6
GSMUA_Achr5P26690_001	Banana	extracellular, vacuole	63.72	73.85
GSMUA_Achr5P26730_001	Banana	extracellular, vacuole	70.35	73.27
GSMUA_Achr5P26750_001	Banana	extracellular, vacuole	70.35	73.27
VIT_14s0128g01040.t01	Wine grape	peroxisome	39.82	73.17
GSMUA_Achr5P26760_001	Banana	extracellular, vacuole	69.47	72.35
GSMUA_Achr5P26710_001	Banana	cytosol	64.16	72.14
TraesCS1A01G053100.1	Wheat	extracellular, vacuole	68.58	72.09
TraesCS1A01G053000.1	Wheat	extracellular	68.14	71.63
TraesCS1A01G052600.1	Wheat	extracellular, vacuole	67.7	71.16
VIT_14s0006g02360.t01	Wine grape	cytosol, plastid	64.16	70.73
TraesCS1A01G052700.1	Wheat	extracellular, vacuole	66.37	69.77
VIT_14s0006g02380.t01	Wine grape	extracellular	66.37	68.81
VIT_14s0006g02420.t01	Wine grape	extracellular, vacuole	67.26	68.78
VIT_14s0060g02700.t01	Wine grape	cytosol	64.16	68.4
VIT_14s0006g02350.t01	Wine grape	extracellular	66.81	68.33
VIT_14s0006g02370.t01	Wine grape	extracellular	66.81	68.33
VIT_14s0006g02440.t01	Wine grape	extracellular, vacuole	66.81	68.33
VIT_14s0060g02730.t01	Wine grape	peroxisome	62.39	68.12
VIT_14s0006g02430.t01	Wine grape	extracellular	65.49	67.89
VIT_14s0006g02330.t01	Wine grape	extracellular, vacuole	66.37	67.87
VIT_14s0006g02390.t01	Wine grape	extracellular	66.37	67.87
TraesCS5A01G044300.1	Wheat	extracellular	70.35	67.66
VIT_16s0039g02920.t01	Wine grape	plastid	54.87	67.39
VIT_14s0128g00920.t01	Wine grape	extracellular, vacuole	65.49	66.97
TraesCS2A01G370100.1	Wheat	extracellular, vacuole	56.19	66.84
VIT_14s0128g00990.t01	Wine grape	extracellular, vacuole	65.04	66.82
VIT_14s0128g01030.t01	Wine grape	extracellular, vacuole	65.04	66.82
PGSC0003DMT400040093	Potato	extracellular	66.81	66.23
VIT_14s0060g02750.t01	Wine grape	extracellular, vacuole	64.16	65.91
VIT_14s0060g02760.t01	Wine grape	extracellular, vacuole	64.16	65.91
VIT_14s0128g00980.t01	Wine grape	extracellular, vacuole	64.16	65.91
VIT_14s0128g01020.t01	Wine grape	extracellular, vacuole	64.16	65.91
PGSC0003DMT400053423	Potato	extracellular	66.37	65.79
VIT_14s0060g02710.t01	Wine grape	extracellular, vacuole	57.08	65.48
Solyc01g102900.2.1	Tomato	extracellular	65.93	65.35
VIT_14s0128g01000.t01	Wine grape	extracellular, vacuole	65.04	65.33
VIT_16s0013g00010.t01	Wine grape	extracellular	65.04	65.33
VIT_16s0013g00060.t01	Wine grape	extracellular	65.04	65.33
VIT_16s0039g02860.t01	Wine grape	extracellular	65.04	65.33
TraesCS7A01G386800.1	Wheat	endoplasmic reticulum, extracellular	67.7	65.11
VIT_14s0128g00650.t01	Wine grape	extracellular	63.27	65.0
VIT_14s0128g01010.t01	Wine grape	extracellular, vacuole	63.27	65.0
PGSC0003DMT400046992	Potato	extracellular	65.49	64.91
GSMUA_Achr5P26700_001	Banana	extracellular	51.33	64.8
KRH07003	Soybean	extracellular	63.27	64.71
TraesCS6A01G033500.1	Wheat	extracellular	62.83	64.55
VIT_14s0060g02690.t01	Wine grape	extracellular	62.83	64.55
KRG92599	Soybean	extracellular	63.27	64.41
KRG94060	Soybean	extracellular	62.83	64.25
KRG94062	Soybean	extracellular	62.83	64.25
KRG94063	Soybean	extracellular	62.83	64.25
KRG94068	Soybean	extracellular	62.83	64.25
KRG94455	Soybean	extracellular	62.83	64.25
KRG94454	Soybean	extracellular	62.39	63.8
KRG94457	Soybean	extracellular	62.39	63.8
KRG94046	Soybean	extracellular	50.88	63.54
TraesCS7A01G451800.1	Wheat	extracellular	61.06	63.3
KRH07002	Soybean	extracellular	61.5	62.9
PGSC0003DMT400046891	Potato	extracellular	63.72	62.61
TraesCS7A01G452000.1	Wheat	extracellular	60.18	62.39
KRH42281	Soybean	extracellular	59.29	62.33
VIT_12s0059g00730.t01	Wine grape	extracellular	59.29	62.04
KRH58405	Soybean	vacuole	58.85	61.86
VIT_16s0013g00090.t01	Wine grape	extracellular, vacuole	62.39	61.84
KRH07001	Soybean	extracellular	60.18	61.82
VIT_14s0128g00690.t01	Wine grape	extracellular, plasma membrane, vacuole	61.5	61.78
KRH34184	Soybean	extracellular	63.27	61.64
VIT_10s0003g05260.t01	Wine grape	extracellular	58.85	61.57
PGSC0003DMT400046879	Potato	cytosol, extracellular, plastid, vacuole	46.02	61.54
TraesCS7A01G451700.1	Wheat	extracellular	59.29	61.47
VIT_10s0003g05300.t01	Wine grape	extracellular, vacuole	58.41	61.4
VIT_12s0059g00720.t01	Wine grape	plastid	42.92	61.39
PGSC0003DMT400046887	Potato	extracellular	62.39	61.3
KRH11811	Soybean	extracellular	57.96	60.93
PGSC0003DMT400029687	Potato	extracellular	58.41	60.83
KRG94458	Soybean	extracellular	58.85	60.73
KRH07007	Soybean	extracellular	59.29	60.63
KRG94453	Soybean	extracellular	56.64	60.38
KRG92598	Soybean	extracellular	61.95	60.34
AT5G39120.1	Thale cress	extracellular	58.85	60.18
AT5G39150.1	Thale cress	extracellular	58.85	60.18
AT5G39180.1	Thale cress	extracellular	58.85	60.18
KRH34183	Soybean	extracellular	52.65	60.1
Bra020560.1-P	Field mustard	endoplasmic reticulum, extracellular, vacuole	59.29	60.09
CDX99669	Canola	vacuole	59.29	60.09
CDY05545	Canola	endoplasmic reticulum, extracellular, vacuole	59.29	60.09
CDY15957	Canola	vacuole	59.29	60.09
AT5G39160.1	Thale cress	extracellular, vacuole	58.85	59.91
PGSC0003DMT400029689	Potato	extracellular	57.52	59.91
Solyc10g078840.1.1	Tomato	extracellular	57.52	59.91
CDY11695	Canola	endoplasmic reticulum, extracellular, vacuole	57.96	59.82
CDY66959	Canola	extracellular	57.96	59.82
Bra030358.1-P	Field mustard	endoplasmic reticulum, extracellular, vacuole	58.85	59.64
CDY36876	Canola	extracellular	57.96	59.55
KRH07008	Soybean	extracellular, plasma membrane, vacuole	56.64	59.53
VIT_10s0003g05250.t01	Wine grape	extracellular	56.64	59.53
AT5G39110.1	Thale cress	endoplasmic reticulum, extracellular, vacuole	58.41	59.46
AT5G39190.1	Thale cress	extracellular, vacuole	58.41	59.46
KRH36828	Soybean	extracellular	57.08	59.45
CDY69099	Canola	endoplasmic reticulum, extracellular, vacuole	57.52	59.36
Bra039727.1-P	Field mustard	extracellular	57.52	59.09
CDY36875	Canola	extracellular, vacuole	57.52	59.09
CDY53728	Canola	extracellular	57.52	59.09
AT5G39130.1	Thale cress	extracellular	57.96	59.01
Bra028225.1-P	Field mustard	extracellular, vacuole	57.96	59.01
CDX74487	Canola	extracellular, vacuole	57.96	59.01
CDY37880	Canola	extracellular	57.96	59.01
AT3G05950.1	Thale cress	extracellular, plasma membrane, vacuole	59.73	58.95
Bra028467.1-P	Field mustard	endoplasmic reticulum, extracellular, vacuole	57.08	58.9
AT5G38930.1	Thale cress	extracellular	57.96	58.74
Solyc10g078850.1.1	Tomato	extracellular	54.42	58.57
AT4G14630.1	Thale cress	extracellular	57.52	58.56
AT5G38960.1	Thale cress	extracellular	57.52	58.3
CDY69461	Canola	extracellular	48.23	57.07
VIT_14s0128g00970.t01	Wine grape	vacuole	64.6	57.03
Bra027979.1-P	Field mustard	extracellular	49.12	56.35
CDX95190	Canola	extracellular	49.12	56.35
Bra040243.1-P	Field mustard	extracellular, plasma membrane, vacuole	57.08	56.33
CDY18834	Canola	extracellular, plasma membrane, vacuole	57.08	56.33
KRG94061	Soybean	extracellular, plasma membrane, vacuole	51.33	56.31
KRG94695	Soybean	nucleus	52.65	56.13
AT3G04200.1	Thale cress	extracellular, vacuole	55.75	55.51
AT5G38940.2	Thale cress	plastid	58.85	53.85
Bra028424.1-P	Field mustard	extracellular, vacuole	51.33	52.73
CDX67421	Canola	extracellular, vacuole	51.33	52.73
PGSC0003DMT400044231	Potato	extracellular	51.77	52.23
Solyc09g089990.2.1	Tomato	extracellular	51.77	52.23
Bra025428.1-P	Field mustard	cytosol, extracellular, vacuole	57.52	51.79
TraesCS2A01G459900.1	Wheat	extracellular, vacuole	60.18	51.71
AT3G04190.1	Thale cress	extracellular, vacuole	50.44	51.35
AT3G04180.1	Thale cress	extracellular, vacuole	49.12	50.0
TraesCS2A01G459800.1	Wheat	vacuole	59.73	50.0
AT3G04170.1	Thale cress	extracellular, vacuole	48.67	48.46
Bra001097.1-P	Field mustard	extracellular, plasma membrane, vacuole	49.56	48.07
CDX99677	Canola	extracellular, vacuole	57.96	47.64
CDX74197	Canola	cytosol, extracellular, plastid, vacuole	39.82	46.39
AT3G04150.2	Thale cress	extracellular, vacuole	47.79	44.63
Solyc09g090040.2.1	Tomato	extracellular	44.25	43.86
PGSC0003DMT400044224	Potato	extracellular	43.36	43.56
GSMUA_AchrUn_...	Banana	endoplasmic reticulum, extracellular, vacuole	71.24	37.79
PGSC0003DMT400087849	Potato	extracellular	58.85	31.0

Protein Annotations

EnsemblPlants:TraesCS3A01G012400.1	EnsemblPlantsGene:TraesCS3A01G012400	Gene3D:2.60.120.10	GO:GO:0003674	GO:GO:0005488	GO:GO:0030145
GO:GO:0045735	InterPro:Cupin_1	InterPro:Germin	InterPro:Germin_Mn-BS	InterPro:IPR014710	InterPro:RmlC-like_jellyroll
InterPro:RmlC_Cupin_sf	PANTHER:PTHR31238	PANTHER:PTHR31238:SF94	PFAM:PF00190	PRINTS:PR00325	ScanProsite:PS00725
SignalP:SignalP-noTM	SMART:SM00835	SUPFAM:SSF51182	MapMan:35.1	:	:

Description

No Description!

Coordinates

chr3A:+:9555990..9556814

Molecular Weight (calculated)

24497.4 Da

IEP (calculated)

6.513

GRAVY (calculated)

0.112

Length

226 amino acids

Sequence
(BLAST)

001: MASSSFLLFT AILALVSWQA VASDPGPLQD FCVADNSSRV LVNGFVCKDP NAVTAEDFFL AAKLDMPRDT KMSKVGSNVT LVNVMKIAGL NTLGISLARI
101: DYAPLGENPP HTHPRATEIL TVLEGTLYVG FVTSNPENKL FSKELRKGDV FVFPQGLIHF QFNPNPYKPA VAIAALSSQN PGAITIANAV FGSKPMISDD
201: VLAKAFQVEK KTVDWLQAQF WADNHN

Best Arabidopsis Sequence Match ( AT5G38960.1 )
(BLAST)

001: MNMKNLYLAI LYLLAASTLP FAIASDPSPL QDFCIGVNTP ANALFVNGKF CKDPKLVTAD DFYFSGLDKA RTTESSPVGS NVTTVNVNQI PGLNTLGISL
101: VRIDYGINGQ NPPHTHPRAT EILLVQEGTL FVGFFSSFPE NRLFNKTLNK GDVFVFPEGL IHFQVNIGKQ PAVAFASLSS QNPGVIIIGN TLFGSKPPID
201: PNVLAKAFQL DPKVIIQLQK KFG

Arabidopsis Description

Putative germin-like protein subfamily 1 member 12 [Source:UniProtKB/Swiss-Prot;Acc:Q9FMA6]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.