Factsheet for TraesCS1A01G052700.1

Subcellular Localization

min:

: max

Winner_takes_all: extracellular, vacuole

Predictor Summary:

mitochondrion 2
vacuole 4
extracellular 4
endoplasmic reticulum 3
plasma membrane 3
golgi 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular, vacuole
Any Predictor:	mitochondrion, secretory
iPSORT:	mitochondrion
MultiLoc:	vacuole
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	mitochondrion
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1A01G052600.1	Wheat	extracellular, vacuole	97.67	97.67
TraesCS1B01G069500.1	Wheat	extracellular, vacuole	94.88	94.88
TraesCS1B01G069800.1	Wheat	extracellular, vacuole	94.88	94.88
HORVU1Hr1G010740.1	Barley	extracellular	94.42	92.27
TraesCS1D01G054500.1	Wheat	extracellular, vacuole	79.07	91.89
HORVU1Hr1G010710.1	Barley	vacuole	93.02	88.89
TraesCS1A01G053100.1	Wheat	extracellular, vacuole	88.84	88.84
TraesCS1A01G053000.1	Wheat	extracellular	86.51	86.51
HORVU1Hr1G010640.1	Barley	extracellular, vacuole	86.05	86.45
TraesCS2A01G370100.1	Wheat	extracellular, vacuole	75.35	85.26
Os02t0491600-00	Rice	extracellular	80.47	80.09
VIT_14s0006g02360.t01	Wine grape	cytosol, plastid	67.91	71.22
GSMUA_Achr8P33360_001	Banana	extracellular	71.16	70.51
GSMUA_Achr8P33390_001	Banana	extracellular	71.16	70.18
TraesCS7A01G451800.1	Wheat	extracellular	71.16	70.18
VIT_16s0039g02920.t01	Wine grape	plastid	60.0	70.11
GSMUA_AchrUn_...	Banana	extracellular	70.7	69.72
TraesCS7A01G451700.1	Wheat	extracellular	70.7	69.72
TraesCS7A01G452000.1	Wheat	extracellular	70.7	69.72
GSMUA_Achr8P33400_001	Banana	extracellular	61.86	69.63
GSMUA_Achr8P33370_001	Banana	extracellular	70.23	69.27
VIT_14s0128g01040.t01	Wine grape	peroxisome	39.53	69.11
TraesCS6A01G033500.1	Wheat	extracellular	70.7	69.09
VIT_14s0060g02700.t01	Wine grape	cytosol	67.91	68.87
VIT_14s0006g02380.t01	Wine grape	extracellular	69.77	68.81
VIT_14s0006g02430.t01	Wine grape	extracellular	69.77	68.81
VIT_14s0006g02350.t01	Wine grape	extracellular	70.23	68.33
VIT_14s0006g02370.t01	Wine grape	extracellular	70.23	68.33
VIT_14s0006g02390.t01	Wine grape	extracellular	70.23	68.33
VIT_14s0006g02420.t01	Wine grape	extracellular, vacuole	70.23	68.33
VIT_14s0006g02440.t01	Wine grape	extracellular, vacuole	70.23	68.33
VIT_10s0003g05300.t01	Wine grape	extracellular, vacuole	67.91	67.91
VIT_14s0006g02330.t01	Wine grape	extracellular, vacuole	69.77	67.87
VIT_16s0013g00010.t01	Wine grape	extracellular	70.7	67.56
VIT_16s0013g00060.t01	Wine grape	extracellular	70.23	67.11
Solyc10g078840.1.1	Tomato	extracellular	67.44	66.82
VIT_16s0039g02860.t01	Wine grape	extracellular	69.77	66.67
TraesCS5A01G543900.1	Wheat	extracellular	70.7	66.38
TraesCS5A01G545200.1	Wheat	extracellular	70.7	66.38
TraesCS3A01G012400.1	Wheat	extracellular	69.77	66.37
TraesCS7A01G473600.1	Wheat	extracellular	69.77	66.37
PGSC0003DMT400029687	Potato	extracellular	66.98	66.36
VIT_10s0003g05260.t01	Wine grape	extracellular	66.51	66.2
VIT_14s0060g02730.t01	Wine grape	peroxisome	63.72	66.18
VIT_10s0003g05250.t01	Wine grape	extracellular	66.05	66.05
VIT_14s0060g02690.t01	Wine grape	extracellular	67.44	65.91
PGSC0003DMT400029689	Potato	extracellular	66.51	65.9
KRG92599	Soybean	extracellular	67.91	65.77
TraesCS5A01G543700.1	Wheat	extracellular	69.77	65.5
TraesCS5A01G544200.1	Wheat	extracellular	69.77	65.5
TraesCS5A01G545400.1	Wheat	extracellular	69.77	65.5
VIT_14s0128g01010.t01	Wine grape	extracellular, vacuole	66.98	65.45
VIT_14s0128g01020.t01	Wine grape	extracellular, vacuole	66.98	65.45
VIT_12s0059g00720.t01	Wine grape	plastid	47.91	65.19
TraesCS3A01G012600.1	Wheat	extracellular	69.3	65.07
TraesCS7A01G473400.1	Wheat	extracellular	68.37	65.04
VIT_14s0128g01030.t01	Wine grape	extracellular, vacuole	66.51	65.0
TraesCS5A01G543600.1	Wheat	extracellular	67.91	64.89
VIT_12s0059g00730.t01	Wine grape	extracellular	65.12	64.81
TraesCS5A01G543800.1	Wheat	extracellular	68.84	64.63
TraesCS5A01G544000.1	Wheat	extracellular	68.84	64.63
TraesCS5A01G544500.1	Wheat	extracellular	68.84	64.63
TraesCS3A01G012500.1	Wheat	extracellular	67.91	64.6
VIT_14s0128g00980.t01	Wine grape	extracellular, vacuole	66.05	64.55
TraesCS5A01G544400.1	Wheat	extracellular	68.37	64.19
VIT_14s0060g02750.t01	Wine grape	extracellular, vacuole	65.58	64.09
VIT_16s0013g00090.t01	Wine grape	extracellular, vacuole	67.91	64.04
KRH34183	Soybean	extracellular	58.6	63.64
VIT_14s0060g02760.t01	Wine grape	extracellular, vacuole	65.12	63.64
VIT_14s0060g02710.t01	Wine grape	extracellular, vacuole	58.14	63.45
VIT_14s0128g00920.t01	Wine grape	extracellular, vacuole	65.12	63.35
Solyc10g078850.1.1	Tomato	extracellular	61.86	63.33
VIT_14s0128g00650.t01	Wine grape	extracellular	64.65	63.18
VIT_14s0128g00990.t01	Wine grape	extracellular, vacuole	64.65	63.18
VIT_14s0128g01000.t01	Wine grape	extracellular, vacuole	66.05	63.11
PGSC0003DMT400046879	Potato	cytosol, extracellular, plastid, vacuole	48.84	62.13
KRH11811	Soybean	extracellular	61.86	61.86
KRH36828	Soybean	extracellular	62.33	61.75
KRG92598	Soybean	extracellular	66.51	61.64
KRH34184	Soybean	extracellular	66.51	61.64
KRH42281	Soybean	extracellular	61.4	61.4
AT5G39150.1	Thale cress	extracellular	61.4	59.73
AT5G39180.1	Thale cress	extracellular	61.4	59.73
PGSC0003DMT400053423	Potato	extracellular	63.26	59.65
VIT_14s0128g00690.t01	Wine grape	extracellular, plasma membrane, vacuole	62.33	59.56
AT5G39110.1	Thale cress	endoplasmic reticulum, extracellular, vacuole	61.4	59.46
AT5G39120.1	Thale cress	extracellular	60.93	59.28
KRH07007	Soybean	extracellular	60.93	59.28
Solyc01g102900.2.1	Tomato	extracellular	62.79	59.21
PGSC0003DMT400046891	Potato	extracellular	63.26	59.13
KRH58405	Soybean	vacuole	59.07	59.07
KRG94455	Soybean	extracellular	60.47	58.82
KRH07003	Soybean	extracellular	60.47	58.82
PGSC0003DMT400040093	Potato	extracellular	62.33	58.77
PGSC0003DMT400046992	Potato	extracellular	62.33	58.77
Bra020560.1-P	Field mustard	endoplasmic reticulum, extracellular, vacuole	60.93	58.74
CDX99669	Canola	vacuole	60.93	58.74
CDY05545	Canola	endoplasmic reticulum, extracellular, vacuole	60.93	58.74
CDY15957	Canola	vacuole	60.93	58.74
KRH07001	Soybean	extracellular	60.0	58.64
KRG94060	Soybean	extracellular	60.0	58.37
KRG94062	Soybean	extracellular	60.0	58.37
KRG94063	Soybean	extracellular	60.0	58.37
KRG94068	Soybean	extracellular	60.0	58.37
KRG94454	Soybean	extracellular	60.0	58.37
KRG94457	Soybean	extracellular	60.0	58.37
Bra030358.1-P	Field mustard	endoplasmic reticulum, extracellular, vacuole	60.47	58.3
KRH07008	Soybean	extracellular, plasma membrane, vacuole	58.14	58.14
KRG94046	Soybean	extracellular	48.84	58.01
CDY69099	Canola	endoplasmic reticulum, extracellular, vacuole	59.07	57.99
KRH07002	Soybean	extracellular	59.53	57.92
AT5G39130.1	Thale cress	extracellular	59.53	57.66
Bra028467.1-P	Field mustard	endoplasmic reticulum, extracellular, vacuole	58.6	57.53
CDY11695	Canola	endoplasmic reticulum, extracellular, vacuole	58.6	57.53
AT5G38930.1	Thale cress	extracellular	59.53	57.4
PGSC0003DMT400046887	Potato	extracellular	61.4	57.39
AT5G39160.1	Thale cress	extracellular, vacuole	59.07	57.21
AT3G05950.1	Thale cress	extracellular, plasma membrane, vacuole	60.93	57.21
CDY66959	Canola	extracellular	58.14	57.08
KRG94695	Soybean	nucleus	56.28	57.08
Bra039727.1-P	Field mustard	extracellular	58.14	56.82
CDY36875	Canola	extracellular, vacuole	58.14	56.82
CDY53728	Canola	extracellular	58.14	56.82
AT5G39190.1	Thale cress	extracellular, vacuole	58.6	56.76
AT5G38960.1	Thale cress	extracellular	58.6	56.5
CDY36876	Canola	extracellular	57.67	56.36
AT4G14630.1	Thale cress	extracellular	58.14	56.31
KRG94458	Soybean	extracellular	57.21	56.16
CDY69461	Canola	extracellular	49.77	56.02
Bra028225.1-P	Field mustard	extracellular, vacuole	57.21	55.41
CDX74487	Canola	extracellular, vacuole	57.21	55.41
CDY37880	Canola	extracellular	57.21	55.41
KRG94453	Soybean	extracellular	54.42	55.19
Bra040243.1-P	Field mustard	extracellular, plasma membrane, vacuole	58.6	55.02
CDY18834	Canola	extracellular, plasma membrane, vacuole	58.6	55.02
VIT_14s0128g00970.t01	Wine grape	vacuole	65.12	54.69
TraesCS5A01G044300.1	Wheat	extracellular	59.53	54.47
TraesCS7A01G386800.1	Wheat	endoplasmic reticulum, extracellular	58.6	53.62
AT3G04200.1	Thale cress	extracellular, vacuole	56.28	53.3
Bra027979.1-P	Field mustard	extracellular	48.37	52.79
CDX95190	Canola	extracellular	48.37	52.79
AT5G38940.2	Thale cress	plastid	60.0	52.23
KRG94061	Soybean	extracellular, plasma membrane, vacuole	49.77	51.94
Bra028424.1-P	Field mustard	extracellular, vacuole	53.02	51.82
CDX67421	Canola	extracellular, vacuole	53.02	51.82
AT3G04190.1	Thale cress	extracellular, vacuole	53.49	51.8
PGSC0003DMT400044231	Potato	extracellular	53.95	51.79
GSMUA_Achr8P33380_001	Banana	extracellular	53.95	51.56
Solyc09g089990.2.1	Tomato	extracellular	53.02	50.89
AT3G04180.1	Thale cress	extracellular, vacuole	52.09	50.45
TraesCS2A01G459900.1	Wheat	extracellular, vacuole	61.4	50.19
CDX74197	Canola	cytosol, extracellular, plastid, vacuole	44.65	49.48
Bra025428.1-P	Field mustard	cytosol, extracellular, vacuole	57.67	49.4
Bra001097.1-P	Field mustard	extracellular, plasma membrane, vacuole	53.49	49.36
TraesCS2A01G459800.1	Wheat	vacuole	60.93	48.52
AT3G04170.1	Thale cress	extracellular, vacuole	51.16	48.46
AT3G04150.2	Thale cress	extracellular, vacuole	52.09	46.28
PGSC0003DMT400044224	Potato	extracellular	48.37	46.22
CDX99677	Canola	extracellular, vacuole	58.6	45.82
Solyc09g090040.2.1	Tomato	extracellular	48.37	45.61
PGSC0003DMT400087849	Potato	extracellular	67.44	33.8

Protein Annotations

EnsemblPlants:TraesCS1A01G052700.1	EnsemblPlantsGene:TraesCS1A01G052700	Gene3D:2.60.120.10	GO:GO:0003674	GO:GO:0005488	GO:GO:0030145
GO:GO:0045735	InterPro:Cupin_1	InterPro:Germin	InterPro:Germin_Mn-BS	InterPro:IPR014710	InterPro:RmlC-like_jellyroll
InterPro:RmlC_Cupin_sf	PANTHER:PTHR31238	PANTHER:PTHR31238:SF90	PFAM:PF00190	PRINTS:PR00325	ScanProsite:PS00725
SEG:seg	SignalP:SignalP-noTM	SMART:SM00835	SUPFAM:SSF51182	MapMan:35.1	:

Description

No Description!

Coordinates

chr1A:-:34859821..34860574

Molecular Weight (calculated)

23006.5 Da

IEP (calculated)

6.673

GRAVY (calculated)

0.183

Length

215 amino acids

Sequence
(BLAST)

001: MASKFFLLAL FTLSASRALA SDPGQLQDFC VADKTSQVFV NGFACKDPKT AVVEDFYFSG LHMVGNTSNK QGSVVTAVNV AQIAGLNTLG VSLARVDYAP
101: DGQNPPHLHP RATEILTVLE GSLYVGFVTS NPENKLFSKV LNKGDVFVFP QGLIHFQFNI GNNEAIAIAA LSSKNPGVIT IANAVFGSKQ TISDDILAKG
201: FQVDKNIIDH IQAQF

Best Arabidopsis Sequence Match ( AT3G05950.1 )
(BLAST)

001: MEGFLRFLVA KAILLALASS FVSCYDPSPL QDFCVAVDDA SGVFVNGKFC KDPKYVKAED FFTSGLNIAG NTINRVGSNV TNVNVDKIPG LNTLGVSLVR
101: IDFAPGGQNP PHTHPRATEI LVVVEGTLLV GFVTSNQDNN RLFSKVLYPG DVFVFPIGMI HFQVNVGRTN AVAFAGLGSQ NPGTITIADA VFGSKPSIMP
201: EILAKAFQLD VNVVKYLEAR FSSNYDRHY

Arabidopsis Description

Germin-like protein subfamily 1 member 7 [Source:UniProtKB/Swiss-Prot;Acc:Q9SFF9]
SUBAcon: [plasma membrane,extracellular,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.