Factsheet for TraesCS1D01G054600.1

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 6
endoplasmic reticulum 4
vacuole 5
plasma membrane 4
golgi 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	secretory
iPSORT:	secretory
MultiLoc:	vacuole
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	extracellular
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1D01G054400.1	Wheat	extracellular	98.14	98.14
TraesCS1B01G069500.1	Wheat	extracellular, vacuole	97.21	97.21
TraesCS1B01G069800.1	Wheat	extracellular, vacuole	97.21	97.21
HORVU1Hr1G010740.1	Barley	extracellular	96.74	94.55
TraesCS1D01G054500.1	Wheat	extracellular, vacuole	80.47	93.51
HORVU1Hr1G010710.1	Barley	vacuole	95.35	91.11
HORVU1Hr1G010640.1	Barley	extracellular, vacuole	87.44	87.85
TraesCS2D01G366500.1	Wheat	extracellular, vacuole	86.51	86.51
Os02t0491600-00	Rice	extracellular	82.79	82.41
TraesCS7D01G440900.1	Wheat	extracellular	73.95	72.94
TraesCS7D01G441000.1	Wheat	extracellular	73.95	72.94
VIT_14s0006g02360.t01	Wine grape	cytosol, plastid	68.84	72.2
TraesCS7D01G440600.1	Wheat	extracellular	73.02	72.02
GSMUA_Achr8P33400_001	Banana	extracellular	63.72	71.73
GSMUA_AchrUn_...	Banana	extracellular	72.09	71.1
GSMUA_Achr8P33360_001	Banana	extracellular	71.63	70.97
TraesCS6D01G039000.1	Wheat	extracellular	72.56	70.91
VIT_14s0128g01040.t01	Wine grape	peroxisome	40.47	70.73
GSMUA_Achr8P33370_001	Banana	extracellular	71.63	70.64
VIT_14s0060g02700.t01	Wine grape	cytosol	69.3	70.28
GSMUA_Achr8P33390_001	Banana	extracellular	71.16	70.18
VIT_14s0006g02380.t01	Wine grape	extracellular	71.16	70.18
VIT_14s0006g02430.t01	Wine grape	extracellular	71.16	70.18
VIT_14s0006g02420.t01	Wine grape	extracellular, vacuole	72.09	70.14
VIT_14s0006g02440.t01	Wine grape	extracellular, vacuole	72.09	70.14
VIT_16s0039g02920.t01	Wine grape	plastid	60.0	70.11
TraesCS7D01G440700.1	Wheat	extracellular	70.7	69.72
VIT_14s0006g02330.t01	Wine grape	extracellular, vacuole	71.63	69.68
VIT_14s0006g02350.t01	Wine grape	extracellular	71.63	69.68
VIT_14s0006g02370.t01	Wine grape	extracellular	71.63	69.68
VIT_14s0006g02390.t01	Wine grape	extracellular	71.63	69.68
TraesCS3D01G010800.1	Wheat	extracellular	73.95	69.43
VIT_16s0013g00060.t01	Wine grape	extracellular	72.09	68.89
TraesCS3D01G011000.1	Wheat	extracellular	72.09	68.58
VIT_16s0013g00010.t01	Wine grape	extracellular	71.63	68.44
VIT_16s0039g02860.t01	Wine grape	extracellular	71.63	68.44
VIT_10s0003g05300.t01	Wine grape	extracellular, vacuole	68.37	68.37
TraesCS7D01G460500.1	Wheat	extracellular	71.63	68.14
VIT_10s0003g05260.t01	Wine grape	extracellular	68.37	68.06
VIT_10s0003g05250.t01	Wine grape	extracellular	67.91	67.91
PGSC0003DMT400029687	Potato	extracellular	68.37	67.74
Solyc10g078840.1.1	Tomato	extracellular	68.37	67.74
VIT_14s0060g02730.t01	Wine grape	peroxisome	64.65	67.15
TraesCS3D01G010900.1	Wheat	extracellular	71.16	67.11
PGSC0003DMT400029689	Potato	extracellular	67.44	66.82
VIT_14s0060g02690.t01	Wine grape	extracellular	68.37	66.82
VIT_14s0128g01010.t01	Wine grape	extracellular, vacuole	68.37	66.82
VIT_14s0128g01020.t01	Wine grape	extracellular, vacuole	68.37	66.82
VIT_12s0059g00730.t01	Wine grape	extracellular	66.98	66.67
VIT_14s0128g01030.t01	Wine grape	extracellular, vacuole	67.91	66.36
KRG92599	Soybean	extracellular	68.37	66.22
TraesCS3D01G011100.1	Wheat	extracellular	69.3	65.93
VIT_14s0128g00980.t01	Wine grape	extracellular, vacuole	67.44	65.91
VIT_14s0060g02750.t01	Wine grape	extracellular, vacuole	66.98	65.45
VIT_12s0059g00720.t01	Wine grape	plastid	47.91	65.19
VIT_14s0060g02760.t01	Wine grape	extracellular, vacuole	66.51	65.0
VIT_14s0060g02710.t01	Wine grape	extracellular, vacuole	59.53	64.97
VIT_16s0013g00090.t01	Wine grape	extracellular, vacuole	68.84	64.91
Solyc10g078850.1.1	Tomato	extracellular	63.26	64.76
VIT_14s0128g00920.t01	Wine grape	extracellular, vacuole	66.51	64.71
VIT_14s0128g00650.t01	Wine grape	extracellular	66.05	64.55
VIT_14s0128g00990.t01	Wine grape	extracellular, vacuole	66.05	64.55
VIT_14s0128g01000.t01	Wine grape	extracellular, vacuole	67.44	64.44
KRH11811	Soybean	extracellular	63.72	63.72
KRH36828	Soybean	extracellular	64.19	63.59
KRH34183	Soybean	extracellular	58.14	63.13
PGSC0003DMT400046879	Potato	cytosol, extracellular, plastid, vacuole	49.3	62.72
KRH34184	Soybean	extracellular	67.44	62.5
KRH42281	Soybean	extracellular	62.33	62.33
KRG92598	Soybean	extracellular	66.98	62.07
PGSC0003DMT400053423	Potato	extracellular	65.58	61.84
AT5G39150.1	Thale cress	extracellular	63.26	61.54
AT5G39180.1	Thale cress	extracellular	63.26	61.54
Solyc01g102900.2.1	Tomato	extracellular	65.12	61.4
VIT_14s0128g00690.t01	Wine grape	extracellular, plasma membrane, vacuole	64.19	61.33
AT5G39110.1	Thale cress	endoplasmic reticulum, extracellular, vacuole	63.26	61.26
AT5G39120.1	Thale cress	extracellular	62.79	61.09
PGSC0003DMT400040093	Potato	extracellular	64.65	60.96
KRH58405	Soybean	vacuole	60.47	60.47
CDY69099	Canola	endoplasmic reticulum, extracellular, vacuole	61.4	60.27
Bra020560.1-P	Field mustard	endoplasmic reticulum, extracellular, vacuole	62.33	60.09
CDX99669	Canola	vacuole	62.33	60.09
CDY05545	Canola	endoplasmic reticulum, extracellular, vacuole	62.33	60.09
CDY15957	Canola	vacuole	62.33	60.09
PGSC0003DMT400046992	Potato	extracellular	63.72	60.09
PGSC0003DMT400046891	Potato	extracellular	64.19	60.0
Bra028467.1-P	Field mustard	endoplasmic reticulum, extracellular, vacuole	60.93	59.82
CDY11695	Canola	endoplasmic reticulum, extracellular, vacuole	60.93	59.82
KRH07007	Soybean	extracellular	61.4	59.73
Bra030358.1-P	Field mustard	endoplasmic reticulum, extracellular, vacuole	61.86	59.64
KRG94455	Soybean	extracellular	60.93	59.28
KRH07003	Soybean	extracellular	60.93	59.28
KRH07001	Soybean	extracellular	60.47	59.09
AT3G05950.1	Thale cress	extracellular, plasma membrane, vacuole	62.79	58.95
KRG94060	Soybean	extracellular	60.47	58.82
KRG94062	Soybean	extracellular	60.47	58.82
KRG94063	Soybean	extracellular	60.47	58.82
KRG94068	Soybean	extracellular	60.47	58.82
KRG94454	Soybean	extracellular	60.47	58.82
KRG94457	Soybean	extracellular	60.47	58.82
AT5G38930.1	Thale cress	extracellular	60.93	58.74
KRG94046	Soybean	extracellular	49.3	58.56
AT5G39130.1	Thale cress	extracellular	60.47	58.56
KRH07002	Soybean	extracellular	60.0	58.37
PGSC0003DMT400046887	Potato	extracellular	62.33	58.26
KRH07008	Soybean	extracellular, plasma membrane, vacuole	58.14	58.14
AT5G39160.1	Thale cress	extracellular, vacuole	60.0	58.11
CDY66959	Canola	extracellular	59.07	57.99
TraesCS5D01G054300.1	Wheat	extracellular	60.93	57.96
CDY36876	Canola	extracellular	59.07	57.73
AT5G39190.1	Thale cress	extracellular, vacuole	59.53	57.66
Bra028225.1-P	Field mustard	extracellular, vacuole	59.53	57.66
CDX74487	Canola	extracellular, vacuole	59.53	57.66
CDY37880	Canola	extracellular	59.53	57.66
AT5G38960.1	Thale cress	extracellular	59.53	57.4
Bra039727.1-P	Field mustard	extracellular	58.6	57.27
CDY36875	Canola	extracellular, vacuole	58.6	57.27
CDY53728	Canola	extracellular	58.6	57.27
Bra040243.1-P	Field mustard	extracellular, plasma membrane, vacuole	60.47	56.77
CDY18834	Canola	extracellular, plasma membrane, vacuole	60.47	56.77
AT4G14630.1	Thale cress	extracellular	58.6	56.76
KRG94458	Soybean	extracellular	57.67	56.62
KRG94695	Soybean	nucleus	55.81	56.6
CDY69461	Canola	extracellular	50.23	56.54
VIT_14s0128g00970.t01	Wine grape	vacuole	66.51	55.86
TraesCS7D01G383300.1	Wheat	extracellular	60.93	55.74
KRG94453	Soybean	extracellular	54.88	55.66
AT3G04200.1	Thale cress	extracellular, vacuole	58.6	55.51
Bra027979.1-P	Field mustard	extracellular	50.23	54.82
CDX95190	Canola	extracellular	50.23	54.82
AT5G38940.2	Thale cress	plastid	61.86	53.85
Bra028424.1-P	Field mustard	extracellular, vacuole	54.42	53.18
CDX67421	Canola	extracellular, vacuole	54.42	53.18
AT3G04190.1	Thale cress	extracellular, vacuole	54.88	53.15
GSMUA_Achr8P33380_001	Banana	extracellular	55.35	52.89
KRG94061	Soybean	extracellular, plasma membrane, vacuole	50.23	52.43
PGSC0003DMT400044231	Potato	extracellular	54.42	52.23
AT3G04180.1	Thale cress	extracellular, vacuole	53.49	51.8
Solyc09g089990.2.1	Tomato	extracellular	53.49	51.34
TraesCS2D01G460200.1	Wheat	extracellular, vacuole	62.79	51.33
Bra001097.1-P	Field mustard	extracellular, plasma membrane, vacuole	54.88	50.64
Bra025428.1-P	Field mustard	cytosol, extracellular, vacuole	58.6	50.2
CDX74197	Canola	cytosol, extracellular, plastid, vacuole	45.12	50.0
AT3G04170.1	Thale cress	extracellular, vacuole	52.56	49.78
TraesCS2D01G460100.1	Wheat	vacuole	62.33	49.63
AT3G04150.2	Thale cress	extracellular, vacuole	53.02	47.11
CDX99677	Canola	extracellular, vacuole	59.53	46.55
Solyc09g090040.2.1	Tomato	extracellular	47.44	44.74
PGSC0003DMT400044224	Potato	extracellular	46.51	44.44
PGSC0003DMT400087849	Potato	extracellular	68.84	34.5

Protein Annotations

EnsemblPlants:TraesCS1D01G054600.1	EnsemblPlantsGene:TraesCS1D01G054600	Gene3D:2.60.120.10	GO:GO:0003674	GO:GO:0005488	GO:GO:0030145
GO:GO:0045735	InterPro:Cupin_1	InterPro:Germin	InterPro:Germin_Mn-BS	InterPro:IPR014710	InterPro:RmlC-like_jellyroll
InterPro:RmlC_Cupin_sf	PANTHER:PTHR31238	PANTHER:PTHR31238:SF90	PFAM:PF00190	PRINTS:PR00325	ScanProsite:PS00725
SEG:seg	SignalP:SignalP-noTM	SMART:SM00835	SUPFAM:SSF51182	MapMan:35.1	:

Description

No Description!

Coordinates

chr1D:-:35926412..35927164

Molecular Weight (calculated)

23029.5 Da

IEP (calculated)

6.506

GRAVY (calculated)

0.200

Length

215 amino acids

Sequence
(BLAST)

001: MASKFFLLAL LALSASHALA SDPGQLQDFC VADKTSQVFV NGFACKDPKT AVVEDFYFSG LHMAGNTSNK QGSIVTAVNV AQIAGLNTLG VSLARVDYAP
101: YGQNPPHLHP RATEILTVLE GSLYVGFVTS NPENKLFSKV LNKGDVFVFP QGLIHFQFNI ENNEAIAIAA LSSKNPGVIT IANAVFGSKQ TISDDILAKA
201: FQVDKNIVDH IQAQF

Best Arabidopsis Sequence Match ( AT3G05950.1 )
(BLAST)

001: MEGFLRFLVA KAILLALASS FVSCYDPSPL QDFCVAVDDA SGVFVNGKFC KDPKYVKAED FFTSGLNIAG NTINRVGSNV TNVNVDKIPG LNTLGVSLVR
101: IDFAPGGQNP PHTHPRATEI LVVVEGTLLV GFVTSNQDNN RLFSKVLYPG DVFVFPIGMI HFQVNVGRTN AVAFAGLGSQ NPGTITIADA VFGSKPSIMP
201: EILAKAFQLD VNVVKYLEAR FSSNYDRHY

Arabidopsis Description

Germin-like protein subfamily 1 member 7 [Source:UniProtKB/Swiss-Prot;Acc:Q9SFF9]
SUBAcon: [plasma membrane,extracellular,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.