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Rice
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Rice
Subcellular Localization
min:
: max

 
Winner_takes_all: extracellular

Predictor Summary:
  • extracellular 8
  • endoplasmic reticulum 5
  • vacuole 6
  • plasma membrane 5
  • golgi 5
  • nucleus 1
Predictors GFP MS/MS Papers
Winner Takes All:extracellular
Any Predictor:nucleus, secretory
BaCelLo:secretory
EpiLoc:nucleus
iPSORT:secretory
MultiLoc:vacuole
Plant-mPloc:extracellular
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:extracellular
YLoc:extracellular
 extracellular: 25047395
msms PMID: 25047395 doi
JY Kim, J Wu, SJ Kwon, H Oh, SE Lee, SG Kim, Y Wang, GK Agrawal, R Rakwal, KY Kang, IP Ahn, BG Kim, ST Kim
Department of Plant Bioscience, Life and Industry Convergence Research Institute, Pusan National University, Miryang, South Korea.
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
EES05073 Sorghum extracellular 81.61 83.87
EES05072 Sorghum extracellular 80.72 82.95
EES05074 Sorghum extracellular 80.72 82.95
EES05075 Sorghum extracellular 78.92 81.11
Os02t0491800-00 Rice extracellular 78.48 78.48
Os02t0491600-00 Rice extracellular 74.89 77.31
GSMUA_Achr8P33360_001 Banana extracellular 70.85 72.81
GSMUA_Achr8P33390_001 Banana extracellular 69.96 71.56
GSMUA_Achr8P33370_001 Banana extracellular 69.51 71.1
GSMUA_AchrUn_... Banana extracellular 69.51 71.1
GSMUA_Achr8P33400_001 Banana extracellular 60.09 70.16
VIT_10s0003g05300.t01 Wine grape extracellular, vacuole 65.92 68.37
VIT_14s0128g01040.t01 Wine grape peroxisome 37.67 68.29
VIT_14s0006g02360.t01 Wine grape cytosol, plastid 62.33 67.8
VIT_16s0039g02920.t01 Wine grape plastid 55.61 67.39
Os08t0189600-01 Rice extracellular 67.71 67.11
VIT_14s0060g02730.t01 Wine grape peroxisome 61.88 66.67
Os08t0189700-01 Rice extracellular 66.82 66.52
Os08t0189850-01 Rice extracellular 66.82 66.52
Os08t0189100-01 Rice extracellular 65.92 66.52
VIT_14s0128g01010.t01 Wine grape extracellular, vacuole 65.47 66.36
Os12t0155000-01 Rice cytosol, extracellular, vacuole 57.85 66.15
VIT_14s0006g02380.t01 Wine grape extracellular 64.57 66.06
VIT_14s0006g02430.t01 Wine grape extracellular 64.57 66.06
VIT_14s0060g02710.t01 Wine grape extracellular, vacuole 58.3 65.99
PGSC0003DMT400029687 Potato extracellular 64.13 65.9
PGSC0003DMT400029689 Potato extracellular 64.13 65.9
Solyc10g078840.1.1 Tomato extracellular 64.13 65.9
VIT_12s0059g00720.t01 Wine grape plastid 46.64 65.82
Os08t0189900-01 Rice extracellular 65.92 65.62
VIT_14s0006g02420.t01 Wine grape extracellular, vacuole 65.02 65.61
VIT_14s0006g02440.t01 Wine grape extracellular, vacuole 65.02 65.61
VIT_14s0060g02700.t01 Wine grape cytosol 62.33 65.57
VIT_14s0128g01020.t01 Wine grape extracellular, vacuole 64.57 65.45
VIT_12s0059g00730.t01 Wine grape extracellular 63.23 65.28
VIT_14s0006g02350.t01 Wine grape extracellular 64.57 65.16
VIT_14s0006g02370.t01 Wine grape extracellular 64.57 65.16
VIT_14s0006g02390.t01 Wine grape extracellular 64.57 65.16
Os12t0154700-01 Rice extracellular 66.82 65.07
Os12t0154800-01 Rice extracellular 66.82 65.07
VIT_14s0128g00980.t01 Wine grape extracellular, vacuole 64.13 65.0
VIT_14s0128g01030.t01 Wine grape extracellular, vacuole 64.13 65.0
VIT_16s0013g00010.t01 Wine grape extracellular 65.47 64.89
Os08t0188900-01 Rice plastid 63.68 64.84
VIT_10s0003g05260.t01 Wine grape extracellular 62.78 64.81
Os08t0189400-01 Rice extracellular 65.02 64.73
Os08t0190100-01 Rice extracellular 65.02 64.73
VIT_14s0006g02330.t01 Wine grape extracellular, vacuole 64.13 64.71
VIT_10s0003g05250.t01 Wine grape extracellular 62.33 64.65
Os08t0189500-01 Rice extracellular 65.02 64.44
VIT_16s0039g02860.t01 Wine grape extracellular 65.02 64.44
KRG92599 Soybean extracellular 64.13 64.41
VIT_14s0128g00920.t01 Wine grape extracellular, vacuole 63.68 64.25
KRH11811 Soybean extracellular 61.88 64.19
VIT_14s0060g02750.t01 Wine grape extracellular, vacuole 63.23 64.09
VIT_14s0128g00650.t01 Wine grape extracellular 63.23 64.09
VIT_16s0013g00060.t01 Wine grape extracellular 64.57 64.0
PGSC0003DMT400046879 Potato cytosol, extracellular, plastid, vacuole 48.43 63.91
VIT_14s0060g02760.t01 Wine grape extracellular, vacuole 62.78 63.64
KRH36828 Soybean extracellular 61.88 63.59
VIT_14s0128g01000.t01 Wine grape extracellular, vacuole 64.13 63.56
Solyc10g078850.1.1 Tomato extracellular 59.64 63.33
Os12t0154900-00 Rice extracellular 65.02 63.32
VIT_14s0128g00990.t01 Wine grape extracellular, vacuole 62.33 63.18
KRH42281 Soybean extracellular 60.09 62.33
PGSC0003DMT400053423 Potato extracellular 63.68 62.28
VIT_14s0060g02690.t01 Wine grape extracellular 61.44 62.27
KRG92598 Soybean extracellular 64.57 62.07
Solyc01g102900.2.1 Tomato extracellular 63.23 61.84
VIT_14s0128g00690.t01 Wine grape extracellular, plasma membrane, vacuole 62.33 61.78
KRH34184 Soybean extracellular 64.13 61.64
KRH58405 Soybean vacuole 59.19 61.4
PGSC0003DMT400040093 Potato extracellular 62.33 60.96
VIT_16s0013g00090.t01 Wine grape extracellular, vacuole 62.33 60.96
PGSC0003DMT400046891 Potato extracellular 62.78 60.87
KRG94060 Soybean extracellular 60.09 60.63
KRG94062 Soybean extracellular 60.09 60.63
KRG94063 Soybean extracellular 60.09 60.63
KRG94068 Soybean extracellular 60.09 60.63
KRG94455 Soybean extracellular 60.09 60.63
KRH07003 Soybean extracellular 60.09 60.63
KRH34183 Soybean extracellular 53.81 60.61
Bra020560.1-P Field mustard endoplasmic reticulum, extracellular, vacuole 60.54 60.54
CDX99669 Canola vacuole 60.54 60.54
CDY05545 Canola endoplasmic reticulum, extracellular, vacuole 60.54 60.54
CDY15957 Canola vacuole 60.54 60.54
Bra039727.1-P Field mustard extracellular 59.64 60.45
CDY36875 Canola extracellular, vacuole 59.64 60.45
CDY53728 Canola extracellular 59.64 60.45
CDY69099 Canola endoplasmic reticulum, extracellular, vacuole 59.19 60.27
KRG94046 Soybean extracellular 48.88 60.22
AT5G39150.1 Thale cress extracellular 59.64 60.18
AT5G39180.1 Thale cress extracellular 59.64 60.18
KRG94454 Soybean extracellular 59.64 60.18
KRG94457 Soybean extracellular 59.64 60.18
KRH07002 Soybean extracellular 59.64 60.18
Bra030358.1-P Field mustard endoplasmic reticulum, extracellular, vacuole 60.09 60.09
PGSC0003DMT400046992 Potato extracellular 61.44 60.09
CDY36876 Canola extracellular 59.19 60.0
PGSC0003DMT400046887 Potato extracellular 61.88 60.0
AT5G39110.1 Thale cress endoplasmic reticulum, extracellular, vacuole 59.64 59.91
AT5G39160.1 Thale cress extracellular, vacuole 59.64 59.91
Bra028467.1-P Field mustard endoplasmic reticulum, extracellular, vacuole 58.74 59.82
CDY11695 Canola endoplasmic reticulum, extracellular, vacuole 58.74 59.82
CDY66959 Canola extracellular 58.74 59.82
AT5G39120.1 Thale cress extracellular 59.19 59.73
KRH07001 Soybean extracellular 58.74 59.55
AT5G39190.1 Thale cress extracellular, vacuole 59.19 59.46
AT3G05950.1 Thale cress extracellular, plasma membrane, vacuole 60.99 59.39
Os08t0189300-01 Rice extracellular 59.64 59.38
Os08t0231400-01 Rice extracellular 59.64 59.38
KRH07007 Soybean extracellular 58.74 59.28
AT5G38960.1 Thale cress extracellular 59.19 59.19
AT5G39130.1 Thale cress extracellular 58.74 59.01
Os08t0189200-01 Rice extracellular 59.19 58.67
CDY69461 Canola extracellular 50.22 58.64
KRH07008 Soybean extracellular, plasma membrane, vacuole 56.5 58.6
AT5G38930.1 Thale cress extracellular 58.3 58.3
AT4G14630.1 Thale cress extracellular 57.85 58.11
Bra028225.1-P Field mustard extracellular, vacuole 57.85 58.11
CDX74487 Canola extracellular, vacuole 57.85 58.11
CDY37880 Canola extracellular 57.85 58.11
Bra040243.1-P Field mustard extracellular, plasma membrane, vacuole 58.74 57.21
CDY18834 Canola extracellular, plasma membrane, vacuole 58.74 57.21
KRG94458 Soybean extracellular 56.05 57.08
KRG94453 Soybean extracellular 53.81 56.6
KRG94695 Soybean nucleus 53.81 56.6
KRG94061 Soybean extracellular, plasma membrane, vacuole 50.67 54.85
Bra027979.1-P Field mustard extracellular 48.43 54.82
CDX95190 Canola extracellular 48.43 54.82
VIT_14s0128g00970.t01 Wine grape vacuole 62.78 54.69
AT3G04200.1 Thale cress extracellular, vacuole 55.61 54.63
AT5G38940.2 Thale cress plastid 59.19 53.44
AT3G04190.1 Thale cress extracellular, vacuole 52.91 53.15
Bra028424.1-P Field mustard extracellular, vacuole 52.02 52.73
CDX67421 Canola extracellular, vacuole 52.02 52.73
Bra025428.1-P Field mustard cytosol, extracellular, vacuole 59.19 52.59
AT3G04180.1 Thale cress extracellular, vacuole 51.12 51.35
PGSC0003DMT400044231 Potato extracellular 51.57 51.34
AT3G04170.1 Thale cress extracellular, vacuole 52.02 51.1
Solyc09g089990.2.1 Tomato extracellular 51.12 50.89
CDX74197 Canola cytosol, extracellular, plastid, vacuole 43.5 50.0
GSMUA_Achr8P33380_001 Banana extracellular 50.22 49.78
Bra001097.1-P Field mustard extracellular, plasma membrane, vacuole 51.12 48.93
CDX99677 Canola extracellular, vacuole 59.19 48.0
AT3G04150.2 Thale cress extracellular, vacuole 49.78 45.87
PGSC0003DMT400044224 Potato extracellular 46.19 45.78
Solyc09g090040.2.1 Tomato extracellular 46.19 45.18
PGSC0003DMT400087849 Potato extracellular 65.47 34.03
Protein Annotations
Gene3D:2.60.120.10MapMan:35.1EntrezGene:4329390ProteinID:BAD21899.1ProteinID:BAD22076.1ProteinID:BAF08789.2
ProteinID:BAS78743.1ncoils:CoilInterPro:Cupin_1ProteinID:EAZ23099.1GO:GO:0003674GO:GO:0005488
GO:GO:0005575GO:GO:0005576GO:GO:0005618GO:GO:0005623GO:GO:0030145GO:GO:0030312
GO:GO:0045735GO:GO:0046872GO:GO:0048046InterPro:GerminInterPro:Germin_Mn-BSInterPro:IPR014710
EnsemblPlantsGene:Os02g0491700EnsemblPlants:Os02t0491700-00PFAM:PF00190PRINTS:PR00325ScanProsite:PS00725PANTHER:PTHR31238
PANTHER:PTHR31238:SF90UniProt:Q6K5P9InterPro:RmlC-like_jellyrollInterPro:RmlC_Cupin_sfSMART:SM00835SUPFAM:SSF51182
SignalP:SignalP-noTMUniParc:UPI0000377D38RefSeq:XP_015624077.1SEG:seg::
Description
GERMIN-LIKE PROTEIN 2-2Putative germin-like protein 2-2. (Os02t0491700-00)
Coordinates
chr2:+:17167417..17168289
Molecular Weight (calculated)
23658.5 Da
IEP (calculated)
7.026
GRAVY (calculated)
0.230
Length
223 amino acids
Sequence
(BLAST)
001: MAAVGACFLQ QLAVVALLAL WCSHGAIASD PGLLQDFCVV DKMSQVRVNG FPCKDAKDVV AGDFFFSGLH MAGNTTNKQG SNVTTVNVAQ IPGLNTMGVS
101: LVRIDYAPNG LNPPHTHPRA TEIPTVLEGS LYVGFVISNP ENKLFTKVLN KGDVFVFPQG LVHFQFNNGT NNAVALAALS SQNPGVITVG NAVFGSKPSI
201: SDDILAKAFQ VDKNIIDRIQ AQF
Best Arabidopsis Sequence Match ( AT3G05950.1 )
(BLAST)
001: MEGFLRFLVA KAILLALASS FVSCYDPSPL QDFCVAVDDA SGVFVNGKFC KDPKYVKAED FFTSGLNIAG NTINRVGSNV TNVNVDKIPG LNTLGVSLVR
101: IDFAPGGQNP PHTHPRATEI LVVVEGTLLV GFVTSNQDNN RLFSKVLYPG DVFVFPIGMI HFQVNVGRTN AVAFAGLGSQ NPGTITIADA VFGSKPSIMP
201: EILAKAFQLD VNVVKYLEAR FSSNYDRHY
Arabidopsis Description
Germin-like protein subfamily 1 member 7 [Source:UniProtKB/Swiss-Prot;Acc:Q9SFF9]
SUBAcon: [plasma membrane,extracellular,vacuole]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.