Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 2
- mitochondrion 1
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| HORVU1Hr1G041820.1 | Barley | nucleus | 23.02 | 18.22 |
| HORVU1Hr1G021530.1 | Barley | nucleus | 23.98 | 17.24 |
| HORVU4Hr1G024480.3 | Barley | cytosol, nucleus | 14.63 | 14.95 |
| HORVU3Hr1G075340.1 | Barley | mitochondrion | 14.87 | 10.86 |
| HORVU5Hr1G047100.5 | Barley | nucleus | 12.95 | 9.42 |
Protein Annotations
| EnsemblPlants:HORVU5Hr1G076910.7 | EnsemblPlantsGene:HORVU5Hr1G076910 | Gene3D:3.30.160.20 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003723 |
| GO:GO:0005488 | InterPro:IPR014720 | InterPro:dsRBD_dom | PANTHER:PTHR10910 | PANTHER:PTHR10910:SF115 | PFAM:PF00035 |
| PFscan:PS50137 | SEG:seg | SMART:SM00358 | SUPFAM:SSF54768 | UniParc:UPI000B476916 | UniProt:A0A287RVC5 |
| MapMan:35.1 | : | : | : | : | : |
Description
No Description!
Coordinates
chrchr5H:-:552165002..552167083
Molecular Weight (calculated)
44327.8 Da
IEP (calculated)
11.838
GRAVY (calculated)
-0.636
Length
417 amino acids
Sequence
(BLAST)
(BLAST)
001: MYKNQLQELA QRSCFSLPSY VCTREGPDHA PRFKATVTFN GETFHGPTCC TTLRQAEHAA AEVALARLST RGPSTYLTAR VLGRDRGVQE PAAGDGAPGG
101: AEAAGLHHRA LRPGPLAGLR LQRGARRPQL RRRRRQDQEA GGEERRHDRL VRPQADAGGA QGARQRLRRR GAGARGRRQG ARRPEAALRR QCGVALTEAA
201: PFFFLCTEPV ALQTPMAASE LPCRTPEDAP RAAAATAGGP QDTASAAHAA ATGAVDLPSR RRAGAAEEDR RGRAGADAGE GHADEQGRCN AVGAVLLPAR
301: PGVPPRRRGA KILRRGRVPL AGDGGERAVS DPGVLRAAFA AAASGGHQGG GRRRSEGPSR APAALGKRGG RELAATKVLK IKKRRGDSVA LHDQIISLVL
401: RSRMEFDREF LCRNLCK
101: AEAAGLHHRA LRPGPLAGLR LQRGARRPQL RRRRRQDQEA GGEERRHDRL VRPQADAGGA QGARQRLRRR GAGARGRRQG ARRPEAALRR QCGVALTEAA
201: PFFFLCTEPV ALQTPMAASE LPCRTPEDAP RAAAATAGGP QDTASAAHAA ATGAVDLPSR RRAGAAEEDR RGRAGADAGE GHADEQGRCN AVGAVLLPAR
301: PGVPPRRRGA KILRRGRVPL AGDGGERAVS DPGVLRAAFA AAASGGHQGG GRRRSEGPSR APAALGKRGG RELAATKVLK IKKRRGDSVA LHDQIISLVL
401: RSRMEFDREF LCRNLCK
001: MYKNQLQELA QRSCFSLPSY TCTREGPDHA PRFKASVNFN GEIFESPTYC STLRQAEHSA AEVALSALSS KGPSKSLTAR VLDETGIYKN LLQETAHRAG
101: LDLPVYTSVR SGPGHIPTFS CTVELAGMSF NGESAKTKKQ AEKNAAIAAW FSLRKMPRLD PLRGEEKEQE IVARVLSRFR PKEVKRREPN QSRRRTVIRT
201: IRQNTTTTTT TTGDLLCEKL RSINLYTNEA SSSSPPPQRF WPSRTNLTQE QSKVKSLLEK CQEYAEKKQS LDDPKPEMRI KTSSPSPLSS SVERNCYSKL
301: LPFPSFVLNH QKLAPAVHIR SVIPVCSAPP PKPNPNPNSS PFITRELGNG SQEKKSLPN
101: LDLPVYTSVR SGPGHIPTFS CTVELAGMSF NGESAKTKKQ AEKNAAIAAW FSLRKMPRLD PLRGEEKEQE IVARVLSRFR PKEVKRREPN QSRRRTVIRT
201: IRQNTTTTTT TTGDLLCEKL RSINLYTNEA SSSSPPPQRF WPSRTNLTQE QSKVKSLLEK CQEYAEKKQS LDDPKPEMRI KTSSPSPLSS SVERNCYSKL
301: LPFPSFVLNH QKLAPAVHIR SVIPVCSAPP PKPNPNPNSS PFITRELGNG SQEKKSLPN
Arabidopsis Description
DRB3Double-stranded RNA-binding protein 3 [Source:UniProtKB/Swiss-Prot;Acc:Q9LJF5]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.