Factsheet for HORVU5Hr1G084140.4

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 2
cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, plastid
iPSORT:	plastid
MultiLoc:	cytosol
TargetP:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5B01G331700.1	Wheat	cytosol	55.79	79.88
TraesCS5A01G331300.1	Wheat	cytosol	54.13	78.92
HORVU5Hr1G110760.2	Barley	cytosol	42.15	64.15
HORVU5Hr1G110810.1	Barley	cytosol	40.5	63.64
TraesCS5D01G337200.1	Wheat	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, plastid, vacuole	64.46	63.16
HORVU5Hr1G110850.1	Barley	cytosol	45.87	62.36
HORVU5Hr1G110800.1	Barley	cytosol	45.45	61.8
HORVU5Hr1G110820.2	Barley	cytosol	45.45	61.8
HORVU2Hr1G115400.1	Barley	cytosol	45.04	61.58
HORVU5Hr1G110830.3	Barley	cytosol	45.45	61.45
HORVU5Hr1G110720.2	Barley	cytosol	45.04	61.24
HORVU3Hr1G089860.3	Barley	cytosol	45.45	61.11
HORVU2Hr1G115380.1	Barley	cytosol	45.45	61.11
HORVU2Hr1G115420.1	Barley	cytosol	44.63	61.02
HORVU5Hr1G110840.1	Barley	cytosol	44.21	60.8
HORVU2Hr1G115410.2	Barley	cytosol	42.15	60.71
HORVU7Hr1G103140.2	Barley	cytosol	43.8	58.89
HORVU5Hr1G090360.1	Barley	cytosol	42.56	57.87
HORVU7Hr1G002220.1	Barley	cytosol, plastid	46.69	53.81
HORVU5Hr1G110790.1	Barley	cytosol	22.73	53.4
HORVU7Hr1G099950.1	Barley	cytosol	38.02	53.18
HORVU7Hr1G099860.2	Barley	cytosol, mitochondrion, nucleus	38.02	52.57
HORVU7Hr1G099840.1	Barley	cytosol	36.78	50.86
HORVU5Hr1G092210.1	Barley	cytosol	28.93	43.48
HORVU7Hr1G099790.1	Barley	cytosol, plastid	32.23	39.59
HORVU1Hr1G035930.1	Barley	cytosol	30.58	30.58
HORVU3Hr1G074970.1	Barley	cytosol, nucleus	24.38	23.41

Protein Annotations

MapMan:19.2.2.8.1.1	Gene3D:3.30.710.10	UniProt:A0A287S299	GO:GO:0006511	GO:GO:0008150	GO:GO:0008152
GO:GO:0009056	GO:GO:0009987	GO:GO:0019538	EnsemblPlantsGene:HORVU5Hr1G084140	EnsemblPlants:HORVU5Hr1G084140.4	PFAM:PF01466
PFAM:PF03931	PANTHER:PTHR11165	PANTHER:PTHR11165:SF89	InterPro:SKP1-like	InterPro:SKP1-like_dim_sf	InterPro:SKP1/BTB/POZ_sf
SMART:SM00512	SUPFAM:SSF54695	SUPFAM:SSF81382	InterPro:Skp1_comp_POZ	InterPro:Skp1_comp_dimer	UniParc:UPI000B461F4F
SEG:seg	:	:	:	:	:

Description

No Description!

Coordinates

chrchr5H:-:571278399..571281219

Molecular Weight (calculated)

25959.8 Da

IEP (calculated)

4.939

GRAVY (calculated)

-0.124

Length

242 amino acids

Sequence
(BLAST)

001: TISPRPTGFG PETPIAPGSR AFLFASPEIK GASLPLPSIP HHHSPPPLGF PAAHHHQKPP PPTSPAIGSM AADAASAAVK NLTLKSSDDE VFVVDVAVAM
101: ASQTIKHLVD DGCADNIIPL PNVSANILIK VIDYCKQHVL NGDAAAAAAD SSSTSTSVKP DEVNLKAFDE HFVKVDQTVL FDLILAANYL EIKGLLDLTC
201: QTVADMIKGK TPEEIRKTFN IVNDFTPQEE EEIRRENQWA FE

Best Arabidopsis Sequence Match ( AT1G20140.1 )
(BLAST)

001: MAETKKMIIL KSSDGESFEI EEAVAVKSQT IKHMIEDDCA DNGIPLPNVT GAILAKVIEY CKKHVEAAAE AGGDKDFYGS AENDELKNWD SEFVKVDQPT
101: LFDLILAANY LNIGGLLDLT CKAVADQMRG KTPEQMRAHF NIKNDYTPEE EAEVRNENKW AFE

Arabidopsis Description

ASK4SK4 [Source:UniProtKB/TrEMBL;Acc:A0A178W187]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.