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Barley
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Barley
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 2
  • golgi 1
  • cytosol 2
  • mitochondrion 2
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, golgi, mitochondrion, nucleus
BaCelLo:nucleus
EpiLoc:golgi
MultiLoc:cytosol
Plant-mPloc:nucleus
PProwler:mitochondrion
WoLF PSORT:mitochondrion
YLoc:cytosol
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
HORVU7Hr1G099860.2 Barley cytosol, mitochondrion, nucleus 90.29 90.29
HORVU7Hr1G099950.1 Barley cytosol 89.14 90.17
TraesCS5B01G099600.1 Wheat cytosol 78.29 78.29
TraesCS5D01G105800.1 Wheat cytosol 62.86 75.34
TraesCS5A01G093500.1 Wheat cytosol 70.86 75.15
TraesCS6B01G024700.1 Wheat cytosol 72.0 75.0
TraesCS6D01G002600.1 Wheat cytosol 74.86 74.86
TraesCS6A01G016900.1 Wheat cytosol 76.0 74.72
TraesCS6B01G008800.1 Wheat cytosol 72.57 72.57
HORVU7Hr1G099790.1 Barley cytosol, plastid 78.29 69.54
TraesCS6A01G017300.1 Wheat cytosol 61.71 69.23
HORVU5Hr1G110790.1 Barley cytosol 40.0 67.96
TraesCS6D01G020500.1 Wheat cytosol 60.57 67.95
HORVU5Hr1G110800.1 Barley cytosol 65.14 64.04
HORVU5Hr1G110820.2 Barley cytosol 65.14 64.04
HORVU5Hr1G110810.1 Barley cytosol 56.0 63.64
HORVU5Hr1G110830.3 Barley cytosol 64.57 63.13
HORVU5Hr1G110840.1 Barley cytosol 61.71 61.36
HORVU5Hr1G110760.2 Barley cytosol 54.86 60.38
HORVU5Hr1G110720.2 Barley cytosol 61.14 60.11
HORVU5Hr1G090360.1 Barley cytosol 61.14 60.11
HORVU2Hr1G115400.1 Barley cytosol 60.57 59.89
HORVU5Hr1G110850.1 Barley cytosol 60.57 59.55
HORVU2Hr1G115410.2 Barley cytosol 57.14 59.52
HORVU3Hr1G089860.3 Barley cytosol 60.57 58.89
HORVU7Hr1G103140.2 Barley cytosol 60.57 58.89
HORVU2Hr1G115380.1 Barley cytosol 60.0 58.33
HORVU2Hr1G115420.1 Barley cytosol 58.29 57.63
HORVU7Hr1G002220.1 Barley cytosol, plastid 67.43 56.19
PGSC0003DMT400088621 Potato cytosol 34.29 51.28
Solyc03g112710.1.1 Tomato cytosol 44.0 50.99
PGSC0003DMT400090609 Potato cytosol 43.43 50.33
CDY03015 Canola cytosol 43.43 50.33
PGSC0003DMT400038385 Potato cytosol 42.86 49.67
PGSC0003DMT400093573 Potato cytosol 42.86 49.67
PGSC0003DMT400088820 Potato cytosol 42.86 49.67
PGSC0003DMT400088220 Potato cytosol 42.29 49.01
VIT_19s0085g00180.t01 Wine grape cytosol 41.71 48.03
PGSC0003DMT400087694 Potato cytosol 41.14 48.0
PGSC0003DMT400097239 Potato cytosol 41.14 47.68
GSMUA_Achr4P25740_001 Banana cytosol 40.0 47.3
Os02t0101600-00 Rice cytosol 43.43 47.2
PGSC0003DMT400093419 Potato cytosol 40.57 47.02
PGSC0003DMT400085217 Potato cytosol 33.71 45.38
PGSC0003DMT400090072 Potato cytosol 26.29 45.1
VIT_15s0045g00490.t01 Wine grape cytosol 38.86 45.03
Solyc11g008230.1.1 Tomato cytosol 40.57 44.94
PGSC0003DMT400086770 Potato cytosol 32.0 44.44
HORVU5Hr1G092210.1 Barley cytosol 40.57 44.1
PGSC0003DMT400091657 Potato cytosol 39.43 43.67
PGSC0003DMT400095953 Potato cytosol 39.43 43.67
PGSC0003DMT400085417 Potato cytosol 31.43 43.65
PGSC0003DMT400088079 Potato cytosol 28.0 42.61
VIT_10s0003g05820.t01 Wine grape cytosol 39.43 42.59
PGSC0003DMT400096238 Potato cytosol 35.43 41.61
VIT_19s0085g00190.t01 Wine grape cytosol 37.14 41.4
GSMUA_Achr4P25750_001 Banana cytosol 40.57 40.11
PGSC0003DMT400019185 Potato cytosol 41.14 40.0
Solyc11g008400.1.1 Tomato cytosol 40.57 39.44
PGSC0003DMT400089461 Potato cytosol 28.57 39.37
Solyc11g008240.1.1 Tomato cytosol 34.86 38.61
Solyc03g093190.1.1 Tomato cytosol 26.86 38.52
PGSC0003DMT400093338 Potato cytosol 36.57 38.1
HORVU5Hr1G084140.4 Barley cytosol 50.86 36.78
KRH13748 Soybean cytosol 34.29 32.79
PGSC0003DMT400019237 Potato cytosol 33.71 31.22
HORVU1Hr1G035930.1 Barley cytosol 42.29 30.58
PGSC0003DMT400096074 Potato cytosol 29.14 29.65
Solyc11g008420.1.1 Tomato cytosol 31.43 29.1
HORVU3Hr1G074970.1 Barley cytosol, nucleus 29.71 20.63
Protein Annotations
MapMan:19.2.2.8.1.1Gene3D:3.30.710.10GO:GO:0006511GO:GO:0008150GO:GO:0008152GO:GO:0009056
GO:GO:0009987GO:GO:0019538EnsemblPlantsGene:HORVU7Hr1G099840EnsemblPlants:HORVU7Hr1G099840.1UniProt:M0Z4N0PFAM:PF01466
PFAM:PF03931PIRSF:PIRSF028729PANTHER:PTHR11165PANTHER:PTHR11165:SF89InterPro:SKP1InterPro:SKP1-like
InterPro:SKP1-like_dim_sfInterPro:SKP1/BTB/POZ_sfSMART:SM00512SUPFAM:SSF54695SUPFAM:SSF81382InterPro:Skp1_comp_POZ
InterPro:Skp1_comp_dimerUniParc:UPI00029504CFSEG:seg:::
Description
No Description!
Coordinates
chrchr7H:+:602676188..602677599
Molecular Weight (calculated)
19664.5 Da
IEP (calculated)
4.814
GRAVY (calculated)
-0.376
Length
175 amino acids
Sequence
(BLAST)
001: MATAAAGEKK MIMLKSSDGE EFEVEEAVAM ASQTIRHMIE DDCTDKRISI PNINSKILSK VIEYCNKHIP TKRADDTTGA TGVVASDAVA PPGLAKDLKI
101: WDAEFMKVDH VTLFDLIQAP RYLNIKGLFD LTCQTAANMI SGKTPEEIRN IFNIKNDYLP EEEEKIRREN QWAFQ
Best Arabidopsis Sequence Match ( AT1G20140.1 )
(BLAST)
001: MAETKKMIIL KSSDGESFEI EEAVAVKSQT IKHMIEDDCA DNGIPLPNVT GAILAKVIEY CKKHVEAAAE AGGDKDFYGS AENDELKNWD SEFVKVDQPT
101: LFDLILAANY LNIGGLLDLT CKAVADQMRG KTPEQMRAHF NIKNDYTPEE EAEVRNENKW AFE
Arabidopsis Description
ASK4SK4 [Source:UniProtKB/TrEMBL;Acc:A0A178W187]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.