Factsheet for VIT_15s0045g00490.t01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 1
golgi 1
cytosol 3
nucleus 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_19s0085g00180.t01	Wine grape	cytosol	48.34	48.03
VIT_03s0038g02500.t01	Wine grape	cytosol	49.01	47.74
TraesCS2D01G560500.1	Wheat	cytosol	49.67	45.73
TraesCS2D01G560300.1	Wheat	cytosol	49.01	45.12
TraesCS2D01G560700.1	Wheat	cytosol	49.01	45.12
Solyc03g112710.1.1	Tomato	cytosol	45.03	45.03
OQU87046	Sorghum	cytosol	39.74	44.78
TraesCS2D01G560400.1	Wheat	cytosol	48.34	44.51
TraesCS4A01G366400.1	Wheat	cytosol	48.34	44.51
EES06093	Sorghum	cytosol	49.67	44.38
PGSC0003DMT400097239	Potato	cytosol	44.37	44.37
Os11t0456300-01	Rice	plasma membrane	50.33	43.93
TraesCS6D01G045500.1	Wheat	cytosol	49.01	43.79
TraesCS7D01G016900.1	Wheat	cytosol	49.01	43.79
PGSC0003DMT400088621	Potato	cytosol	33.77	43.59
TraesCS6A01G000300.1	Wheat	cytosol	47.02	43.56
TraesCS6B01G004300.1	Wheat	cytosol	47.02	43.56
EES13900	Sorghum	cytosol	48.34	43.45
TraesCS5B01G474100.1	Wheat	cytosol	46.36	43.21
EES09697	Sorghum	cytosol	50.33	43.18
Zm00001d049230_P001	Maize	mitochondrion	50.33	43.18
PGSC0003DMT400038385	Potato	cytosol	43.05	43.05
TraesCS4A01G472600.1	Wheat	cytosol	49.01	43.02
TraesCS7A01G020600.1	Wheat	cytosol	49.01	43.02
TraesCS3B01G308600.1	Wheat	cytosol	46.36	42.94
TraesCS2D01G420100.1	Wheat	cytosol	49.67	42.86
VIT_19s0085g00190.t01	Wine grape	cytosol	44.37	42.68
TraesCS7A01G498800.1	Wheat	cytosol	46.36	42.42
PGSC0003DMT400088820	Potato	cytosol	42.38	42.38
PGSC0003DMT400093573	Potato	cytosol	42.38	42.38
PGSC0003DMT400085217	Potato	cytosol	36.42	42.31
TraesCS5D01G475600.1	Wheat	cytosol	49.01	42.29
TraesCS6D01G001600.1	Wheat	cytosol	49.01	42.29
HORVU2Hr1G115410.2	Barley	cytosol	47.02	42.26
TraesCS6D01G044400.1	Wheat	cytosol	37.75	42.22
TraesCS2B01G590600.1	Wheat	cytosol	48.34	41.95
HORVU5Hr1G110790.1	Barley	cytosol	28.48	41.75
PGSC0003DMT400090609	Potato	cytosol	41.72	41.72
TraesCS5D01G475400.1	Wheat	golgi, plastid, unclear	48.34	41.71
TraesCS7D01G194900.1	Wheat	cytosol	48.34	41.71
TraesCS2A01G522300.1	Wheat	cytosol	48.34	41.48
TraesCS3D01G509600.1	Wheat	cytosol	47.02	41.28
TraesCS7B01G098900.1	Wheat	cytosol	47.68	41.14
CDY03015	Canola	cytosol	41.06	41.06
HORVU5Hr1G110810.1	Barley	cytosol	41.72	40.91
HORVU2Hr1G115420.1	Barley	cytosol	47.68	40.68
PGSC0003DMT400087694	Potato	cytosol	40.4	40.67
TraesCS3B01G566400.1	Wheat	cytosol	38.41	40.56
HORVU5Hr1G110720.2	Barley	cytosol	47.68	40.45
HORVU5Hr1G110850.1	Barley	cytosol	47.68	40.45
HORVU5Hr1G110840.1	Barley	cytosol	47.02	40.34
TraesCS5A01G462800.1	Wheat	cytosol	35.76	40.3
TraesCS6B01G053400.1	Wheat	cytosol	36.42	40.15
HORVU2Hr1G115400.1	Barley	cytosol	47.02	40.11
HORVU2Hr1G115380.1	Barley	cytosol	47.68	40.0
Os09t0539500-01	Rice	cytosol, plasma membrane, plastid	46.36	40.0
EER99267	Sorghum	cytosol	45.7	39.88
PGSC0003DMT400093419	Potato	cytosol	39.74	39.74
TraesCS7A01G193600.1	Wheat	cytosol	35.76	39.71
TraesCS2D01G524400.1	Wheat	cytosol	42.38	39.51
HORVU3Hr1G089860.3	Barley	cytosol	47.02	39.44
HORVU5Hr1G110800.1	Barley	cytosol	46.36	39.33
HORVU5Hr1G110820.2	Barley	cytosol	46.36	39.33
PGSC0003DMT400088079	Potato	cytosol	29.8	39.13
HORVU7Hr1G103140.2	Barley	cytosol	46.36	38.89
VIT_10s0003g05820.t01	Wine grape	cytosol	41.72	38.89
HORVU7Hr1G099840.1	Barley	cytosol	45.03	38.86
TraesCS5B01G165700.1	Wheat	cytosol	45.03	38.86
TraesCS2B01G442100.1	Wheat	mitochondrion	45.7	38.76
Solyc11g008230.1.1	Tomato	cytosol	40.4	38.61
VIT_18s0001g14860.t01	Wine grape	cytosol, mitochondrion	50.33	38.58
HORVU5Hr1G110830.3	Barley	cytosol	45.7	38.55
VIT_03s0038g02490.t01	Wine grape	mitochondrion	38.41	38.41
HORVU7Hr1G099860.2	Barley	cytosol, mitochondrion, nucleus	44.37	38.29
TraesCS5B01G099600.1	Wheat	cytosol	44.37	38.29
TraesCS5B01G372700.1	Wheat	cytosol	41.06	38.27
HORVU7Hr1G099950.1	Barley	cytosol	43.71	38.15
PGSC0003DMT400085417	Potato	cytosol	31.79	38.1
TraesCS5D01G379900.1	Wheat	cytosol	37.09	38.1
Zm00001d022618_P001	Maize	cytosol	43.05	38.01
Os08t0375500-00	Rice	cytosol	42.38	37.87
PGSC0003DMT400088220	Potato	cytosol	37.75	37.75
HORVU5Hr1G110760.2	Barley	cytosol	39.74	37.74
HORVU5Hr1G090360.1	Barley	cytosol	44.37	37.64
TraesCS3A01G374400.1	Wheat	cytosol	40.4	37.42
Os08t0375700-00	Rice	cytosol	41.72	37.28
HORVU5Hr1G092210.1	Barley	cytosol	39.74	37.27
TraesCS5D01G173200.1	Wheat	cytosol	44.37	37.22
GSMUA_Achr4P25740_001	Banana	cytosol	36.42	37.16
Os09t0273800-01	Rice	cytosol	41.06	37.13
PGSC0003DMT400096238	Potato	cytosol	36.42	36.91
TraesCS5A01G168900.1	Wheat	cytosol	44.37	36.81
Os06t0113800-00	Rice	cytosol	40.4	36.75
PGSC0003DMT400086770	Potato	cytosol	30.46	36.51
PGSC0003DMT400090072	Potato	cytosol	24.5	36.27
Os09t0412050-00	Rice	cytosol	39.74	35.71
TraesCS5D01G105800.1	Wheat	cytosol	34.44	35.62
TraesCS3B01G406500.1	Wheat	cytosol	38.41	35.58
PGSC0003DMT400095953	Potato	cytosol	37.09	35.44
TraesCS4B01G337400.1	Wheat	cytosol	37.09	35.44
TraesCS6D01G002600.1	Wheat	cytosol	41.06	35.43
TraesCS5A01G093500.1	Wheat	cytosol	38.41	35.15
TraesCS6B01G008800.1	Wheat	cytosol	40.4	34.86
TraesCS6A01G016900.1	Wheat	cytosol	41.06	34.83
TraesCS7B01G492200.1	Wheat	cytosol	40.4	34.66
Zm00001d007590_P001	Maize	cytosol	43.05	34.57
TraesCS3D01G077800.1	Wheat	cytosol	38.41	34.52
GSMUA_Achr4P25750_001	Banana	cytosol	40.4	34.46
Os09t0275200-01	Rice	cytosol	36.42	34.38
TraesCS3B01G092200.1	Wheat	cytosol	37.75	34.34
Os09t0274800-00	Rice	cytosol	39.07	34.3
HORVU7Hr1G002220.1	Barley	cytosol, plastid	47.68	34.29
TraesCS5D01G176900.1	Wheat	cytosol	44.37	34.18
PGSC0003DMT400091657	Potato	cytosol	35.76	34.18
OQU76826	Sorghum	cytosol	39.07	34.1
TraesCS7A01G565800.1	Wheat	cytosol	39.74	34.09
TraesCS7B01G492300.1	Wheat	cytosol	39.74	34.09
TraesCS7B01G492500.1	Wheat	cytosol	39.74	34.09
TraesCS5B01G169700.1	Wheat	cytosol	45.03	34.0
TraesCS7B01G492400.1	Wheat	cytosol	39.07	33.52
Zm00001d007589_P001	Maize	cytosol	43.05	33.51
Zm00001d007659_P001	Maize	cytosol	42.38	33.33
TraesCS5A01G172300.1	Wheat	cytosol	43.05	32.99
Solyc11g008240.1.1	Tomato	cytosol	34.44	32.91
TraesCS7D01G544900.1	Wheat	cytosol	31.13	32.87
Zm00001d007586_P001	Maize	cytosol	41.72	32.81
TraesCS6B01G024700.1	Wheat	cytosol	36.42	32.74
TraesCS1D01G201900.1	Wheat	cytosol	35.76	32.53
PGSC0003DMT400019185	Potato	cytosol	38.41	32.22
TraesCS4A01G379700.1	Wheat	cytosol	31.79	32.21
TraesCS7A01G565700.1	Wheat	cytosol	36.42	32.16
TraesCS6A01G017300.1	Wheat	cytosol	33.11	32.05
Solyc03g093190.1.1	Tomato	cytosol	25.83	31.97
Solyc11g008400.1.1	Tomato	cytosol	37.75	31.67
TraesCS7D01G545000.2	Wheat	cytosol	35.76	31.58
TraesCS2A01G574500.1	Wheat	cytosol	35.1	31.55
TraesCS6D01G020500.1	Wheat	cytosol	32.45	31.41
Os07t0625500-01	Rice	cytosol	35.76	31.03
Os07t0624900-00	Rice	cytosol	41.06	31.0
PGSC0003DMT400093338	Potato	cytosol	33.77	30.36
Os07t0625600-00	Rice	cytosol	35.76	30.34
PGSC0003DMT400089461	Potato	cytosol	25.17	29.92
HORVU7Hr1G099790.1	Barley	cytosol, plastid	36.42	27.92
KRH13748	Soybean	cytosol	32.45	26.78
Os02t0101600-00	Rice	cytosol	28.48	26.71
PGSC0003DMT400096074	Potato	cytosol	29.8	26.16
Zm00001d042677_P001	Maize	plastid	44.37	25.38
Os10t0438100-00	Rice	cytosol	36.42	25.0
Solyc11g008420.1.1	Tomato	cytosol	29.8	23.81
TraesCS1A01G129800.1	Wheat	cytosol	36.42	23.31
TraesCS1B01G156000.1	Wheat	cytosol	36.42	23.31
PGSC0003DMT400019237	Potato	cytosol	29.14	23.28
EER94185	Sorghum	cytosol	32.45	23.22
TraesCS1D01G138400.1	Wheat	cytosol	36.42	23.11
HORVU1Hr1G035930.1	Barley	cytosol	36.42	22.73
HORVU3Hr1G074970.1	Barley	cytosol, nucleus	28.48	17.06
OQU90298	Sorghum	cytosol	39.07	16.91
VIT_03s0038g02480.t01	Wine grape	cytosol	45.7	15.75
TraesCS3B01G340200.1	Wheat	cytosol	36.42	13.19
TraesCS3D01G305500.1	Wheat	cytosol	38.41	11.35
TraesCS3A01G297000.1	Wheat	cytosol	39.74	11.32
TraesCS3B01G340100.1	Wheat	nucleus	38.41	11.15
VIT_00s0349g00030.t01	Wine grape	cytosol	36.42	2.16

Protein Annotations

EntrezGene:100243632	wikigene:100243632	MapMan:19.2.2.8.1.1	Gene3D:3.30.710.10	ProteinID:CCB60757	ProteinID:CCB60757.1
UniProt:F6I1E0	EMBL:FN596510	GO:GO:0006511	GO:GO:0008150	GO:GO:0008152	GO:GO:0009056
GO:GO:0009987	GO:GO:0019538	EntrezGene:LOC100243632	wikigene:LOC100243632	PFAM:PF01466	PFAM:PF03931
PIRSF:PIRSF028729	PANTHER:PTHR11165	PANTHER:PTHR11165:SF88	InterPro:SKP1	InterPro:SKP1-like	InterPro:SKP1-like_dim_sf
InterPro:SKP1/BTB/POZ_sf	SMART:SM00512	SUPFAM:SSF54695	SUPFAM:SSF81382	InterPro:Skp1_comp_POZ	InterPro:Skp1_comp_dimer
UniParc:UPI00019855BF	ArrayExpress:VIT_15s0045g00490	EnsemblPlantsGene:VIT_15s0045g00490	EnsemblPlants:VIT_15s0045g00490.t01	RefSeq:XP_002273625	RefSeq:XP_002273625.1
SEG:seg	:	:	:	:	:

Description

No Description!

Coordinates

chr15:+:5336314..5336983

Molecular Weight (calculated)

17524.0 Da

IEP (calculated)

4.416

GRAVY (calculated)

-0.227

Length

151 amino acids

Sequence
(BLAST)

001: MAFTKKVTLR SSDGELFIID RAVALQSRTI QYVLEDTNPV DAFIPVPAVD ARTLSKVLEY CKKHLIDLNT DFDYSEWDKD FVDVEVRMLY DLIMAADYLN
101: IPPLIDLICD KIASLFKGQT PEKIREIFNI ENDFSKEEEE DFKKKSGWAF K

Best Arabidopsis Sequence Match ( AT4G34210.1 )
(BLAST)

001: MSSKMIVLMS SDGQSFEVEE AVAIQSQTIA HMVEDDCVAD GIPLANVESK ILVKVIEYCK KHHVDEANPI SEEDLNNWDE KFMDLEQSTI FELILAANYL
101: NIKSLLDLTC QTVADMIKGK TPEEIRSTFN IENDFTPEEE EAVRKENQWA FE

Arabidopsis Description

ASK11SKP1-like protein 11 [Source:UniProtKB/Swiss-Prot;Acc:O49484]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.