Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
- mitochondrion 1
- golgi 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d007586_P001 | Maize | cytosol | 97.4 | 97.4 |
| Zm00001d007589_P001 | Maize | cytosol | 97.92 | 96.91 |
| Zm00001d007590_P001 | Maize | cytosol | 94.79 | 96.81 |
| OQU87046 | Sorghum | cytosol | 50.52 | 72.39 |
| EES13900 | Sorghum | cytosol | 59.38 | 67.86 |
| EES06093 | Sorghum | cytosol | 58.85 | 66.86 |
| TraesCS7D01G016900.1 | Wheat | cytosol | 56.77 | 64.5 |
| Zm00001d049230_P001 | Maize | mitochondrion | 58.33 | 63.64 |
| TraesCS7A01G020600.1 | Wheat | cytosol | 56.77 | 63.37 |
| TraesCS4A01G472600.1 | Wheat | cytosol | 56.25 | 62.79 |
| Zm00001d042677_P001 | Maize | plastid | 81.25 | 59.09 |
| CDY03015 | Canola | cytosol | 42.71 | 54.3 |
| VIT_19s0085g00180.t01 | Wine grape | cytosol | 42.19 | 53.29 |
| PGSC0003DMT400088621 | Potato | cytosol | 32.29 | 52.99 |
| PGSC0003DMT400093573 | Potato | cytosol | 40.1 | 50.99 |
| PGSC0003DMT400090609 | Potato | cytosol | 40.1 | 50.99 |
| PGSC0003DMT400038385 | Potato | cytosol | 39.58 | 50.33 |
| Solyc03g112710.1.1 | Tomato | cytosol | 39.58 | 50.33 |
| PGSC0003DMT400087694 | Potato | cytosol | 39.06 | 50.0 |
| HORVU7Hr1G002220.1 | Barley | cytosol, plastid | 54.17 | 49.52 |
| PGSC0003DMT400088820 | Potato | cytosol | 38.54 | 49.01 |
| PGSC0003DMT400093419 | Potato | cytosol | 37.5 | 47.68 |
| PGSC0003DMT400088220 | Potato | cytosol | 36.98 | 47.02 |
| PGSC0003DMT400097239 | Potato | cytosol | 36.98 | 47.02 |
| Solyc11g008230.1.1 | Tomato | cytosol | 38.02 | 46.2 |
| Zm00001d022618_P001 | Maize | cytosol | 41.15 | 46.2 |
| PGSC0003DMT400085217 | Potato | cytosol | 31.25 | 46.15 |
| PGSC0003DMT400088079 | Potato | cytosol | 27.08 | 45.22 |
| PGSC0003DMT400095953 | Potato | cytosol | 36.46 | 44.3 |
| PGSC0003DMT400090072 | Potato | cytosol | 23.44 | 44.12 |
| PGSC0003DMT400091657 | Potato | cytosol | 35.94 | 43.67 |
| PGSC0003DMT400086770 | Potato | cytosol | 28.65 | 43.65 |
| VIT_10s0003g05820.t01 | Wine grape | cytosol | 36.46 | 43.21 |
| GSMUA_Achr4P25740_001 | Banana | cytosol | 32.81 | 42.57 |
| VIT_15s0045g00490.t01 | Wine grape | cytosol | 33.33 | 42.38 |
| Solyc03g093190.1.1 | Tomato | cytosol | 26.56 | 41.8 |
| PGSC0003DMT400089461 | Potato | cytosol | 27.6 | 41.73 |
| PGSC0003DMT400019185 | Potato | cytosol | 39.06 | 41.67 |
| PGSC0003DMT400085417 | Potato | cytosol | 27.08 | 41.27 |
| Solyc11g008400.1.1 | Tomato | cytosol | 38.54 | 41.11 |
| PGSC0003DMT400096238 | Potato | cytosol | 31.77 | 40.94 |
| GSMUA_Achr4P25750_001 | Banana | cytosol | 35.94 | 38.98 |
| VIT_19s0085g00190.t01 | Wine grape | cytosol | 31.25 | 38.22 |
| Solyc11g008240.1.1 | Tomato | cytosol | 31.25 | 37.97 |
| PGSC0003DMT400093338 | Potato | cytosol | 32.29 | 36.9 |
| PGSC0003DMT400096074 | Potato | cytosol | 30.21 | 33.72 |
| KRH13748 | Soybean | cytosol | 31.25 | 32.79 |
| PGSC0003DMT400019237 | Potato | cytosol | 30.21 | 30.69 |
| Solyc11g008420.1.1 | Tomato | cytosol | 28.12 | 28.57 |
Protein Annotations
| EntrezGene:103648178 | MapMan:19.2.2.8.1.1 | Gene3D:3.30.710.10 | UniProt:A0A1D6F7U9 | GO:GO:0005575 | GO:GO:0006511 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009056 | GO:GO:0009987 | GO:GO:0016020 | GO:GO:0016021 |
| GO:GO:0019538 | ProteinID:ONM27300.1 | PFAM:PF01466 | PFAM:PF03931 | PIRSF:PIRSF028729 | PANTHER:PTHR11165 |
| PANTHER:PTHR11165:SF24 | InterPro:SKP1 | InterPro:SKP1-like | InterPro:SKP1-like_dim_sf | InterPro:SKP1/BTB/POZ_sf | SMART:SM00512 |
| SUPFAM:SSF54695 | SUPFAM:SSF81382 | InterPro:Skp1_comp_POZ | InterPro:Skp1_comp_dimer | TMHMM:TMhelix | UniParc:UPI0002216712 |
| EnsemblPlantsGene:Zm00001d007659 | EnsemblPlants:Zm00001d007659_P001 | EnsemblPlants:Zm00001d007659_T001 | SEG:seg | : | : |
Description
SKP1-like protein 1A
Coordinates
chr2:-:237086921..237087499
Molecular Weight (calculated)
21366.8 Da
IEP (calculated)
4.549
GRAVY (calculated)
0.007
Length
192 amino acids
Sequence
(BLAST)
(BLAST)
001: MAEKKMLTLR TSDCEEFEVE QAVLMKSEII RFMIEDDCAD NVIPLPNVNS KTLALVIEYC NKHVHADAAE TTSASSAGGG GEVDLKKWDA EFVKVAPATL
101: FDLIMAANYL DIKGLQGLTC RAVVDMIQGK SPEEIRKTFN IKNDLTKEEE EAIRSENSWA FDPLPVRSSR PRWLLLALIS IASLLVCSYL LI
101: FDLIMAANYL DIKGLQGLTC RAVVDMIQGK SPEEIRKTFN IKNDLTKEEE EAIRSENSWA FDPLPVRSSR PRWLLLALIS IASLLVCSYL LI
001: MAETKKMIIL KSSDGESFEI EEAVAVKSQT IKHMIEDDCA DNGIPLPNVT GAILAKVIEY CKKHVEAAAE AGGDKDFYGS AENDELKNWD SEFVKVDQPT
101: LFDLILAANY LNIGGLLDLT CKAVADQMRG KTPEQMRAHF NIKNDYTPEE EAEVRNENKW AFE
101: LFDLILAANY LNIGGLLDLT CKAVADQMRG KTPEQMRAHF NIKNDYTPEE EAEVRNENKW AFE
Arabidopsis Description
ASK4SK4 [Source:UniProtKB/TrEMBL;Acc:A0A178W187]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.