Factsheet for VIT_19s0085g00180.t01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
golgi 2
cytosol 4
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus, secretory
BaCelLo:	nucleus
EpiLoc:	golgi
MultiLoc:	cytosol
Plant-mPloc:	cytosol, nucleus
PProwler:	secretory
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
OQU87046	Sorghum	cytosol	46.05	52.24
VIT_19s0085g00190.t01	Wine grape	cytosol	53.95	52.23
VIT_03s0038g02500.t01	Wine grape	cytosol	52.63	51.61
TraesCS6A01G000300.1	Wheat	cytosol	53.95	50.31
TraesCS6B01G004300.1	Wheat	cytosol	53.95	50.31
TraesCS2D01G560500.1	Wheat	cytosol	53.29	49.39
TraesCS4A01G366400.1	Wheat	cytosol	53.29	49.39
EES13900	Sorghum	cytosol	53.95	48.81
TraesCS2D01G560300.1	Wheat	cytosol	52.63	48.78
TraesCS2D01G560400.1	Wheat	cytosol	52.63	48.78
TraesCS2D01G560700.1	Wheat	cytosol	52.63	48.78
TraesCS5B01G474100.1	Wheat	cytosol	51.97	48.77
EES06093	Sorghum	cytosol	53.95	48.52
TraesCS6D01G045500.1	Wheat	cytosol	53.95	48.52
TraesCS7D01G016900.1	Wheat	cytosol	53.95	48.52
VIT_15s0045g00490.t01	Wine grape	cytosol	48.03	48.34
TraesCS3B01G566400.1	Wheat	cytosol	45.39	48.25
Os11t0456300-01	Rice	plasma membrane	54.61	47.98
TraesCS3D01G509600.1	Wheat	cytosol	53.95	47.67
TraesCS7A01G020600.1	Wheat	cytosol	53.95	47.67
TraesCS6D01G001600.1	Wheat	cytosol	54.61	47.43
TraesCS6D01G044400.1	Wheat	cytosol	42.11	47.41
HORVU5Hr1G110810.1	Barley	cytosol	48.03	47.4
TraesCS3B01G308600.1	Wheat	cytosol	50.66	47.24
EES09697	Sorghum	cytosol	54.61	47.16
Zm00001d049230_P001	Maize	mitochondrion	54.61	47.16
TraesCS2B01G590600.1	Wheat	cytosol	53.95	47.13
TraesCS4A01G472600.1	Wheat	cytosol	53.29	47.09
TraesCS6B01G053400.1	Wheat	cytosol	42.11	46.72
HORVU2Hr1G115410.2	Barley	cytosol	51.32	46.43
TraesCS2D01G420100.1	Wheat	cytosol	53.29	46.29
TraesCS5D01G475600.1	Wheat	cytosol	53.29	46.29
TraesCS7B01G098900.1	Wheat	cytosol	53.29	46.29
GSMUA_Achr4P25740_001	Banana	cytosol	44.74	45.95
TraesCS5D01G475400.1	Wheat	golgi, plastid, unclear	52.63	45.71
TraesCS7D01G194900.1	Wheat	cytosol	51.97	45.14
CDY03015	Canola	cytosol	44.74	45.03
HORVU5Hr1G110720.2	Barley	cytosol	52.63	44.94
TraesCS2A01G522300.1	Wheat	cytosol	51.97	44.89
TraesCS7A01G193600.1	Wheat	cytosol	40.13	44.85
TraesCS5A01G462800.1	Wheat	cytosol	39.47	44.78
VIT_10s0003g05820.t01	Wine grape	cytosol	47.37	44.44
HORVU5Hr1G110850.1	Barley	cytosol	51.97	44.38
Solyc03g112710.1.1	Tomato	cytosol	44.08	44.37
Zm00001d007590_P001	Maize	cytosol	54.61	44.15
HORVU2Hr1G115400.1	Barley	cytosol	51.32	44.07
EER99267	Sorghum	cytosol	50.0	43.93
HORVU3Hr1G089860.3	Barley	cytosol	51.97	43.89
HORVU5Hr1G110800.1	Barley	cytosol	51.32	43.82
HORVU5Hr1G110820.2	Barley	cytosol	51.32	43.82
Solyc11g008230.1.1	Tomato	cytosol	45.39	43.67
HORVU5Hr1G110830.3	Barley	cytosol	51.32	43.58
HORVU2Hr1G115420.1	Barley	cytosol	50.66	43.5
HORVU5Hr1G110760.2	Barley	cytosol	45.39	43.4
HORVU2Hr1G115380.1	Barley	cytosol	51.32	43.33
TraesCS2B01G442100.1	Wheat	mitochondrion	50.66	43.26
HORVU5Hr1G110840.1	Barley	cytosol	50.0	43.18
Os09t0412050-00	Rice	cytosol	47.37	42.86
Zm00001d007589_P001	Maize	cytosol	54.61	42.78
PGSC0003DMT400088621	Potato	cytosol	32.89	42.73
Zm00001d007586_P001	Maize	cytosol	53.95	42.71
TraesCS7A01G565800.1	Wheat	cytosol	49.34	42.61
TraesCS7B01G492200.1	Wheat	cytosol	49.34	42.61
TraesCS7B01G492300.1	Wheat	cytosol	49.34	42.61
TraesCS7B01G492500.1	Wheat	cytosol	49.34	42.61
TraesCS5A01G093500.1	Wheat	cytosol	46.05	42.42
PGSC0003DMT400088820	Potato	cytosol	42.11	42.38
PGSC0003DMT400090609	Potato	cytosol	42.11	42.38
PGSC0003DMT400093573	Potato	cytosol	42.11	42.38
Os09t0539500-01	Rice	cytosol, plasma membrane, plastid	48.68	42.29
TraesCS5B01G099600.1	Wheat	cytosol	48.68	42.29
HORVU7Hr1G103140.2	Barley	cytosol	50.0	42.22
Zm00001d007659_P001	Maize	cytosol	53.29	42.19
Os06t0113800-00	Rice	cytosol	46.05	42.17
Zm00001d022618_P001	Maize	cytosol	47.37	42.11
HORVU5Hr1G110790.1	Barley	cytosol	28.29	41.75
PGSC0003DMT400038385	Potato	cytosol	41.45	41.72
PGSC0003DMT400097239	Potato	cytosol	41.45	41.72
HORVU7Hr1G099840.1	Barley	cytosol	48.03	41.71
HORVU7Hr1G099950.1	Barley	cytosol	47.37	41.62
HORVU5Hr1G090360.1	Barley	cytosol	48.68	41.57
Os09t0274800-00	Rice	cytosol	46.71	41.28
TraesCS7A01G498800.1	Wheat	cytosol	44.74	41.21
HORVU7Hr1G099860.2	Barley	cytosol, mitochondrion, nucleus	47.37	41.14
TraesCS5B01G165700.1	Wheat	cytosol	47.37	41.14
TraesCS6D01G002600.1	Wheat	cytosol	47.37	41.14
VIT_03s0038g02490.t01	Wine grape	mitochondrion	40.79	41.06
TraesCS2D01G524400.1	Wheat	cytosol	43.42	40.74
VIT_18s0001g14860.t01	Wine grape	cytosol, mitochondrion	52.63	40.61
TraesCS5D01G173200.1	Wheat	cytosol	48.03	40.56
OQU76826	Sorghum	cytosol	46.05	40.46
TraesCS5D01G105800.1	Wheat	cytosol	38.82	40.41
TraesCS7B01G492400.1	Wheat	cytosol	46.71	40.34
Os08t0375500-00	Rice	cytosol	44.74	40.24
Os08t0375700-00	Rice	cytosol	44.74	40.24
TraesCS5B01G372700.1	Wheat	cytosol	42.76	40.12
TraesCS5A01G168900.1	Wheat	cytosol	48.03	40.11
PGSC0003DMT400087694	Potato	cytosol	39.47	40.0
TraesCS3A01G374400.1	Wheat	cytosol	42.76	39.88
PGSC0003DMT400095953	Potato	cytosol	41.45	39.87
TraesCS7A01G565700.1	Wheat	cytosol	44.74	39.77
TraesCS5D01G379900.1	Wheat	cytosol	38.16	39.46
Os09t0275200-01	Rice	cytosol	41.45	39.38
PGSC0003DMT400090072	Potato	cytosol	26.32	39.22
TraesCS7D01G544900.1	Wheat	cytosol	36.84	39.16
TraesCS3D01G077800.1	Wheat	cytosol	42.76	38.69
TraesCS6B01G024700.1	Wheat	cytosol	42.76	38.69
PGSC0003DMT400091657	Potato	cytosol	40.13	38.61
TraesCS3B01G092200.1	Wheat	cytosol	42.11	38.55
GSMUA_Achr4P25750_001	Banana	cytosol	44.74	38.42
PGSC0003DMT400093419	Potato	cytosol	38.16	38.41
TraesCS5D01G176900.1	Wheat	cytosol	49.34	38.27
TraesCS6A01G016900.1	Wheat	cytosol	44.74	38.2
HORVU7Hr1G002220.1	Barley	cytosol, plastid	52.63	38.1
TraesCS7D01G545000.2	Wheat	cytosol	42.76	38.01
TraesCS5B01G169700.1	Wheat	cytosol	50.0	38.0
HORVU5Hr1G092210.1	Barley	cytosol	40.13	37.89
PGSC0003DMT400088220	Potato	cytosol	37.5	37.75
Os09t0273800-01	Rice	cytosol	41.45	37.72
TraesCS3B01G406500.1	Wheat	cytosol	40.13	37.42
TraesCS4B01G337400.1	Wheat	cytosol	38.82	37.34
PGSC0003DMT400019185	Potato	cytosol	44.08	37.22
Solyc11g008400.1.1	Tomato	cytosol	44.08	37.22
TraesCS5A01G172300.1	Wheat	cytosol	48.03	37.06
TraesCS4A01G379700.1	Wheat	cytosol	36.18	36.91
TraesCS6B01G008800.1	Wheat	cytosol	42.11	36.57
PGSC0003DMT400089461	Potato	cytosol	30.26	36.22
PGSC0003DMT400096238	Potato	cytosol	34.87	35.57
Solyc11g008240.1.1	Tomato	cytosol	36.84	35.44
TraesCS2A01G574500.1	Wheat	cytosol	38.82	35.12
TraesCS1D01G201900.1	Wheat	cytosol	38.16	34.94
PGSC0003DMT400085417	Potato	cytosol	28.95	34.92
PGSC0003DMT400085217	Potato	cytosol	29.61	34.62
Os07t0625500-01	Rice	cytosol	39.47	34.48
Os07t0624900-00	Rice	cytosol	44.74	34.0
PGSC0003DMT400088079	Potato	cytosol	25.0	33.04
PGSC0003DMT400093338	Potato	cytosol	36.18	32.74
TraesCS6A01G017300.1	Wheat	cytosol	33.55	32.69
TraesCS6D01G020500.1	Wheat	cytosol	33.55	32.69
Os07t0625600-00	Rice	cytosol	38.16	32.58
PGSC0003DMT400086770	Potato	cytosol	26.32	31.75
Zm00001d042677_P001	Maize	plastid	53.29	30.68
KRH13748	Soybean	cytosol	36.84	30.6
PGSC0003DMT400019237	Potato	cytosol	36.84	29.63
Solyc03g093190.1.1	Tomato	cytosol	23.68	29.51
HORVU7Hr1G099790.1	Barley	cytosol, plastid	37.5	28.93
Os10t0438100-00	Rice	cytosol	40.79	28.18
PGSC0003DMT400096074	Potato	cytosol	31.58	27.91
Solyc11g008420.1.1	Tomato	cytosol	34.21	27.51
Os02t0101600-00	Rice	cytosol	28.95	27.33
TraesCS1A01G129800.1	Wheat	cytosol	40.13	25.85
TraesCS1B01G156000.1	Wheat	cytosol	40.13	25.85
TraesCS1D01G138400.1	Wheat	cytosol	40.13	25.63
EER94185	Sorghum	cytosol	34.87	25.12
HORVU1Hr1G035930.1	Barley	cytosol	39.47	24.79
HORVU3Hr1G074970.1	Barley	cytosol, nucleus	30.92	18.65
OQU90298	Sorghum	cytosol	38.82	16.91
VIT_03s0038g02480.t01	Wine grape	cytosol	48.68	16.89
TraesCS3B01G340200.1	Wheat	cytosol	37.5	13.67
TraesCS3D01G305500.1	Wheat	cytosol	40.13	11.94
TraesCS3B01G340100.1	Wheat	nucleus	40.79	11.92
TraesCS3A01G297000.1	Wheat	cytosol	40.79	11.7
VIT_00s0349g00030.t01	Wine grape	cytosol	36.84	2.2

Protein Annotations

EntrezGene:100251299	wikigene:100251299	EntrezGene:100256453	wikigene:100256453	MapMan:19.2.2.8.1.1	Gene3D:3.30.710.10
EMBL:AM424297	ProteinID:CAN60120	ProteinID:CAN60120.1	ProteinID:CCB49014	ProteinID:CCB49014.1	UniProt:F6H9X1
EMBL:FN595503	GO:GO:0005575	GO:GO:0006511	GO:GO:0008150	GO:GO:0008152	GO:GO:0009056
GO:GO:0009987	GO:GO:0016020	GO:GO:0016021	GO:GO:0019538	EntrezGene:LOC100251299	wikigene:LOC100251299
EntrezGene:LOC100256453	wikigene:LOC100256453	PFAM:PF01466	PFAM:PF03931	PIRSF:PIRSF028729	PANTHER:PTHR11165
PANTHER:PTHR11165:SF86	InterPro:SKP1	InterPro:SKP1-like	InterPro:SKP1-like_dim_sf	InterPro:SKP1/BTB/POZ_sf	SMART:SM00512
SUPFAM:SSF54695	SUPFAM:SSF81382	InterPro:Skp1_comp_POZ	InterPro:Skp1_comp_dimer	TMHMM:TMhelix	UniParc:UPI00015CC36E
ArrayExpress:VIT_19s0085g00180	EnsemblPlantsGene:VIT_19s0085g00180	EnsemblPlants:VIT_19s0085g00180.t01	RefSeq:XP_002265068	RefSeq:XP_002265068.1	RefSeq:XP_002265139
RefSeq:XP_002265139.1	:	:	:	:	:

Description

No Description!

Coordinates

chr19:+:22512408..22512866

Molecular Weight (calculated)

17259.8 Da

IEP (calculated)

4.493

GRAVY (calculated)

-0.325

Length

152 amino acids

Sequence
(BLAST)

001: MAKTVNLKSS DGHIFTVEEA VALKCHTIKN VVEDTGDDEV LLPKVNGKTL AKVMEYCEKH VKEPSGLDQK EVDEMKKWDM EFVDVDQAVL YDMLMAANYL
101: SIAGLIELIC MKAADMIRGK SPEQIREIFK IENDFTKEEE AKIRGENAWA FE

Best Arabidopsis Sequence Match ( AT1G20140.1 )
(BLAST)

001: MAETKKMIIL KSSDGESFEI EEAVAVKSQT IKHMIEDDCA DNGIPLPNVT GAILAKVIEY CKKHVEAAAE AGGDKDFYGS AENDELKNWD SEFVKVDQPT
101: LFDLILAANY LNIGGLLDLT CKAVADQMRG KTPEQMRAHF NIKNDYTPEE EAEVRNENKW AFE

Arabidopsis Description

ASK4SK4 [Source:UniProtKB/TrEMBL;Acc:A0A178W187]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.