Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 3
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Os11t0456300-01 | Rice | plasma membrane | 45.5 | 52.6 |
| Os07t0625500-01 | Rice | cytosol | 44.0 | 50.57 |
| Os09t0539500-01 | Rice | cytosol, plasma membrane, plastid | 43.5 | 49.71 |
| Os07t0625600-00 | Rice | cytosol | 41.5 | 46.63 |
| Os09t0275200-01 | Rice | cytosol | 36.5 | 45.62 |
| VIT_19s0085g00180.t01 | Wine grape | cytosol | 34.0 | 44.74 |
| PGSC0003DMT400038385 | Potato | cytosol | 33.0 | 43.71 |
| Solyc03g112710.1.1 | Tomato | cytosol | 32.5 | 43.05 |
| PGSC0003DMT400088621 | Potato | cytosol | 25.0 | 42.73 |
| Os09t0273800-01 | Rice | cytosol | 35.5 | 42.52 |
| CDY03015 | Canola | cytosol | 32.0 | 42.38 |
| PGSC0003DMT400093573 | Potato | cytosol | 32.0 | 42.38 |
| PGSC0003DMT400090609 | Potato | cytosol | 31.5 | 41.72 |
| PGSC0003DMT400088820 | Potato | cytosol | 31.5 | 41.72 |
| Os09t0412050-00 | Rice | cytosol | 35.0 | 41.67 |
| VIT_15s0045g00490.t01 | Wine grape | cytosol | 31.0 | 41.06 |
| VIT_10s0003g05820.t01 | Wine grape | cytosol | 33.0 | 40.74 |
| PGSC0003DMT400087694 | Potato | cytosol | 30.5 | 40.67 |
| PGSC0003DMT400093419 | Potato | cytosol | 30.0 | 39.74 |
| Os08t0375500-00 | Rice | cytosol | 33.5 | 39.65 |
| Os09t0274800-00 | Rice | cytosol | 34.0 | 39.53 |
| PGSC0003DMT400097239 | Potato | cytosol | 29.5 | 39.07 |
| PGSC0003DMT400088220 | Potato | cytosol | 29.5 | 39.07 |
| Os08t0375700-00 | Rice | cytosol | 33.0 | 39.05 |
| Solyc11g008230.1.1 | Tomato | cytosol | 30.5 | 38.61 |
| Os06t0113800-00 | Rice | cytosol | 32.0 | 38.55 |
| PGSC0003DMT400019185 | Potato | cytosol | 34.0 | 37.78 |
| Solyc11g008400.1.1 | Tomato | cytosol | 34.0 | 37.78 |
| VIT_19s0085g00190.t01 | Wine grape | cytosol | 29.0 | 36.94 |
| PGSC0003DMT400085217 | Potato | cytosol | 24.0 | 36.92 |
| PGSC0003DMT400095953 | Potato | cytosol | 29.0 | 36.71 |
| GSMUA_Achr4P25740_001 | Banana | cytosol | 27.0 | 36.49 |
| PGSC0003DMT400096238 | Potato | cytosol | 27.0 | 36.24 |
| PGSC0003DMT400091657 | Potato | cytosol | 28.0 | 35.44 |
| PGSC0003DMT400090072 | Potato | cytosol | 18.0 | 35.29 |
| GSMUA_Achr4P25750_001 | Banana | cytosol | 30.5 | 34.46 |
| PGSC0003DMT400093338 | Potato | cytosol | 28.5 | 33.93 |
| PGSC0003DMT400089461 | Potato | cytosol | 21.5 | 33.86 |
| PGSC0003DMT400086770 | Potato | cytosol | 21.0 | 33.33 |
| PGSC0003DMT400085417 | Potato | cytosol | 21.0 | 33.33 |
| Solyc11g008240.1.1 | Tomato | cytosol | 26.0 | 32.91 |
| KRH13748 | Soybean | cytosol | 30.0 | 32.79 |
| PGSC0003DMT400088079 | Potato | cytosol | 18.5 | 32.17 |
| Os10t0438100-00 | Rice | cytosol | 35.0 | 31.82 |
| Solyc03g093190.1.1 | Tomato | cytosol | 18.5 | 30.33 |
| PGSC0003DMT400019237 | Potato | cytosol | 27.5 | 29.1 |
| Solyc11g008420.1.1 | Tomato | cytosol | 25.5 | 26.98 |
| PGSC0003DMT400096074 | Potato | cytosol | 23.0 | 26.74 |
| Os02t0101600-00 | Rice | cytosol | 21.5 | 26.71 |
Protein Annotations
| EntrezGene:107277355 | MapMan:19.2.2.8.1.1 | Gene3D:3.30.710.10 | ProteinID:BAC07053.1 | ProteinID:BAC10862.1 | ProteinID:BAT02722.1 |
| GO:GO:0003674 | GO:GO:0003824 | GO:GO:0006511 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009056 |
| GO:GO:0009987 | GO:GO:0016301 | GO:GO:0016310 | GO:GO:0016740 | GO:GO:0019538 | EnsemblPlantsGene:Os07g0624900 |
| EnsemblPlants:Os07t0624900-00 | PFAM:PF01466 | PFAM:PF03931 | PIRSF:PIRSF028729 | PANTHER:PTHR11165 | PANTHER:PTHR11165:SF89 |
| UniProt:Q8L561 | InterPro:SKP1 | InterPro:SKP1-like | InterPro:SKP1-like_dim_sf | InterPro:SKP1/BTB/POZ_sf | SMART:SM00512 |
| SUPFAM:SSF54695 | SUPFAM:SSF81382 | InterPro:Skp1_comp_POZ | InterPro:Skp1_comp_dimer | UniParc:UPI00000A7FB8 | RefSeq:XP_015646221.1 |
| SEG:seg | : | : | : | : | : |
Description
S-PHASE KINASE-ASSOCIATED PROTEIN1-LIKE PROTEIN 17, Oryza sativa SKP1-like gene 17SKP1. (Os07t0624900-00)
Coordinates
chr7:+:25884418..25885020
Molecular Weight (calculated)
21640.0 Da
IEP (calculated)
4.254
GRAVY (calculated)
-0.691
Length
200 amino acids
Sequence
(BLAST)
(BLAST)
001: MAAGKGKGKE GECDMAAAAA EAEKKGEGST VSRGAAGERV VEDSGGGRRT IHLKSKDGKQ HDVTEASARL SKTIAGMILA GGGGGGADQC IPTPDIDHDT
101: LRVVMQYCDK HAADDADEED LKEWDEDFVD ELDQDALFDV IAAANYLDID GLLDLTCKRV ADTIKGKTPE EIRKEFNIVN DLSKEEEEEI RRENPWAFEQ
101: LRVVMQYCDK HAADDADEED LKEWDEDFVD ELDQDALFDV IAAANYLDID GLLDLTCKRV ADTIKGKTPE EIRKEFNIVN DLSKEEEEEI RRENPWAFEQ
001: MSTKIMLKSS DGKSFEIDED VARKSIAINH MVEDGCATDV IPLRNVTSKI LKIVIDYCEK HVKSKEEEDL KEWDADFMKT IETTILFDVM MAANYLNIQS
101: LLDLTCKTVS DLLQADLLSG KTPDEIRAHF NIENDLTAEE VAKIREENQW AFQ
101: LLDLTCKTVS DLLQADLLSG KTPDEIRAHF NIENDLTAEE VAKIREENQW AFQ
Arabidopsis Description
ASK5SK5 [Source:UniProtKB/TrEMBL;Acc:A0A178VPE2]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.