Factsheet for Os11t0456300-01

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

nucleus 2
golgi 1
cytosol 2
mitochondrion 2

Predictors

GFP

MS/MS

Papers

plasma membrane: 27800704

msms PMID: 27800704 doi

J Cao, C Yang, L Li, L Jiang, Y Wu, C Wu, Q Bu, G Xia, X Liu, Y Luo, J Liu

Huai'an Institute of Agricultural Sciences, Huai'an, 223001, China., Institute of Analytical Chemistry and Synthetic and Functional Biomolecules Center, College of Chemistry and Molecular Engineering, Peking University, Beijing, 100871, China; and., Northeast Institute of Geography and Agroecology, Key Laboratory of Soybean Molecular Design Breeding, Chinese Academy of Sciences, Harbin, 150081, China., State Key Laboratory of Plant Genomics, Institute of Microbiology, Chinese Academy of Sciences, Beijing, 100101, China.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EES09697	Sorghum	cytosol	94.8	93.18
Zm00001d049230_P001	Maize	mitochondrion	94.22	92.61
TraesCS7D01G016900.1	Wheat	cytosol	86.13	88.17
TraesCS7A01G020600.1	Wheat	cytosol	86.71	87.21
TraesCS4A01G472600.1	Wheat	cytosol	86.71	87.21
Os09t0539500-01	Rice	cytosol, plasma membrane, plastid	76.88	76.0
HORVU7Hr1G002220.1	Barley	cytosol, plastid	83.24	68.57
PGSC0003DMT400088621	Potato	cytosol	41.62	61.54
Solyc03g112710.1.1	Tomato	cytosol	53.18	60.93
PGSC0003DMT400093573	Potato	cytosol	52.6	60.26
PGSC0003DMT400090609	Potato	cytosol	52.6	60.26
PGSC0003DMT400038385	Potato	cytosol	52.6	60.26
CDY03015	Canola	cytosol	51.45	58.94
PGSC0003DMT400088820	Potato	cytosol	51.45	58.94
PGSC0003DMT400088220	Potato	cytosol	50.29	57.62
PGSC0003DMT400093419	Potato	cytosol	49.71	56.95
Os08t0375500-00	Rice	cytosol	55.49	56.8
Os08t0375700-00	Rice	cytosol	54.91	56.21
PGSC0003DMT400087694	Potato	cytosol	48.55	56.0
PGSC0003DMT400097239	Potato	cytosol	48.55	55.63
Os09t0412050-00	Rice	cytosol	53.76	55.36
Os09t0273800-01	Rice	cytosol	53.18	55.09
PGSC0003DMT400085217	Potato	cytosol	41.04	54.62
VIT_19s0085g00180.t01	Wine grape	cytosol	47.98	54.61
Os09t0274800-00	Rice	cytosol	53.18	53.49
Os02t0101600-00	Rice	cytosol	49.71	53.42
PGSC0003DMT400088079	Potato	cytosol	34.68	52.17
PGSC0003DMT400086770	Potato	cytosol	37.57	51.59
Os06t0113800-00	Rice	cytosol	49.13	51.2
PGSC0003DMT400090072	Potato	cytosol	30.06	50.98
Solyc11g008230.1.1	Tomato	cytosol	46.24	50.63
PGSC0003DMT400096238	Potato	cytosol	43.35	50.34
VIT_15s0045g00490.t01	Wine grape	cytosol	43.93	50.33
PGSC0003DMT400085417	Potato	cytosol	36.42	50.0
Os09t0275200-01	Rice	cytosol	46.24	50.0
GSMUA_Achr4P25740_001	Banana	cytosol	42.2	49.32
VIT_10s0003g05820.t01	Wine grape	cytosol	45.66	48.77
PGSC0003DMT400095953	Potato	cytosol	44.51	48.73
PGSC0003DMT400091657	Potato	cytosol	43.35	47.47
VIT_19s0085g00190.t01	Wine grape	cytosol	42.2	46.5
PGSC0003DMT400093338	Potato	cytosol	45.09	46.43
PGSC0003DMT400019185	Potato	cytosol	47.98	46.11
Os07t0625600-00	Rice	cytosol	47.4	46.07
Solyc11g008400.1.1	Tomato	cytosol	47.4	45.56
Os07t0624900-00	Rice	cytosol	52.6	45.5
Solyc03g093190.1.1	Tomato	cytosol	31.79	45.08
Os07t0625500-01	Rice	cytosol	43.93	43.68
Solyc11g008240.1.1	Tomato	cytosol	39.31	43.04
GSMUA_Achr4P25750_001	Banana	cytosol	43.93	42.94
PGSC0003DMT400089461	Potato	cytosol	31.21	42.52
KRH13748	Soybean	cytosol	42.2	39.89
PGSC0003DMT400096074	Potato	cytosol	36.99	37.21
Os10t0438100-00	Rice	cytosol	45.09	35.45
PGSC0003DMT400019237	Potato	cytosol	38.73	35.45
Solyc11g008420.1.1	Tomato	cytosol	35.84	32.8

Protein Annotations

MapMan:19.2.2.8.1.1	Gene3D:3.30.710.10	EntrezGene:9270098	ProteinID:ABA93508.1	EMBL:AY598357	ProteinID:BAH95253.1
ProteinID:BAT13929.1	ProteinID:EAZ18273.1	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634
GO:GO:0006464	GO:GO:0006511	GO:GO:0008150	GO:GO:0008152	GO:GO:0009056	GO:GO:0009987
GO:GO:0016032	GO:GO:0016567	GO:GO:0019538	EnsemblPlantsGene:Os11g0456300	EnsemblPlants:Os11t0456300-01	PFAM:PF01466
PFAM:PF03931	PIRSF:PIRSF028729	PANTHER:PTHR11165	PANTHER:PTHR11165:SF89	UniProt:Q6PL11	InterPro:SKP1
InterPro:SKP1-like	InterPro:SKP1-like_dim_sf	InterPro:SKP1/BTB/POZ_sf	SMART:SM00512	SUPFAM:SSF54695	SUPFAM:SSF81382
InterPro:Skp1_comp_POZ	InterPro:Skp1_comp_dimer	UniParc:UPI000035E656	RefSeq:XP_015617535.1	SEG:seg	:

Description

S-PHASE KINASE-ASSOCIATED PROTEIN1-LIKE PROTEIN, Oryza sativa SKP1-like gene 1, rice SKP1-like Protein1Similar to SKP1-like protein 1A. (Os11t0456300-01);Similar to SKP1-like protein 1A. (Os11t0456300-02)

Coordinates

chr11:+:15459465..15462337

Molecular Weight (calculated)

19043.3 Da

IEP (calculated)

4.238

GRAVY (calculated)

-0.392

Length

173 amino acids

Sequence
(BLAST)

001: MAAEGEKKMI TLKSSDGEEF EVEEAVAMES QTIRHMIEDD CADNGIPLPN VNSKILSKVI EYCNKHVHAA AAAASKAADD AASAAAAVPP PSGEDLKNWD
101: ADFVKVDQAT LFDLILAANY LNIKGLLDLT CQTVADMIKG KTPEEIRKTF NIKNDFTPEE EEEIRRENQW AFE

Best Arabidopsis Sequence Match ( AT5G42190.1 )
(BLAST)

001: MSTVRKITLK SSDGENFEID EAVALESQTI KHMIEDDCTD NGIPLPNVTS KILSKVIEYC KRHVEAAEKS ETTADAAAAT TTTTVASGSS DEDLKTWDSE
101: FIKVDQGTLF DLILAANYLN IKGLLDLTCQ TVADMIKGKT PEEIRKTFNI KNDFTPEEEE EVRRENQWAF E

Arabidopsis Description

SKP1BSKP1-like protein 1B [Source:UniProtKB/Swiss-Prot;Acc:Q9FHW7]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.