Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- golgi 1
- cytosol 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Os08t0375700-00 | Rice | cytosol | 68.02 | 69.23 |
| Os08t0375500-00 | Rice | cytosol | 67.44 | 68.64 |
| Os09t0273800-01 | Rice | cytosol | 56.4 | 58.08 |
| Os09t0412050-00 | Rice | cytosol | 54.65 | 55.95 |
| Os11t0456300-01 | Rice | plasma membrane | 53.49 | 53.18 |
| Os06t0113800-00 | Rice | cytosol | 50.0 | 51.81 |
| CDY03015 | Canola | cytosol | 44.77 | 50.99 |
| Os09t0539500-01 | Rice | cytosol, plasma membrane, plastid | 51.16 | 50.29 |
| PGSC0003DMT400088621 | Potato | cytosol | 32.56 | 47.86 |
| PGSC0003DMT400088820 | Potato | cytosol | 41.86 | 47.68 |
| PGSC0003DMT400090609 | Potato | cytosol | 41.86 | 47.68 |
| Solyc03g112710.1.1 | Tomato | cytosol | 41.86 | 47.68 |
| PGSC0003DMT400038385 | Potato | cytosol | 41.28 | 47.02 |
| VIT_19s0085g00180.t01 | Wine grape | cytosol | 41.28 | 46.71 |
| PGSC0003DMT400093573 | Potato | cytosol | 40.7 | 46.36 |
| PGSC0003DMT400088220 | Potato | cytosol | 40.12 | 45.7 |
| OQU76826 | Sorghum | cytosol | 45.35 | 45.09 |
| Os09t0275200-01 | Rice | cytosol | 41.86 | 45.0 |
| PGSC0003DMT400087694 | Potato | cytosol | 38.37 | 44.0 |
| PGSC0003DMT400093419 | Potato | cytosol | 38.37 | 43.71 |
| PGSC0003DMT400097239 | Potato | cytosol | 37.79 | 43.05 |
| PGSC0003DMT400088079 | Potato | cytosol | 28.49 | 42.61 |
| VIT_10s0003g05820.t01 | Wine grape | cytosol | 39.53 | 41.98 |
| PGSC0003DMT400095953 | Potato | cytosol | 37.79 | 41.14 |
| PGSC0003DMT400091657 | Potato | cytosol | 37.79 | 41.14 |
| Solyc11g008230.1.1 | Tomato | cytosol | 37.79 | 41.14 |
| PGSC0003DMT400096238 | Potato | cytosol | 35.47 | 40.94 |
| PGSC0003DMT400085217 | Potato | cytosol | 30.81 | 40.77 |
| VIT_19s0085g00190.t01 | Wine grape | cytosol | 36.63 | 40.13 |
| PGSC0003DMT400019185 | Potato | cytosol | 41.86 | 40.0 |
| Solyc11g008400.1.1 | Tomato | cytosol | 41.86 | 40.0 |
| PGSC0003DMT400089461 | Potato | cytosol | 29.07 | 39.37 |
| PGSC0003DMT400090072 | Potato | cytosol | 23.26 | 39.22 |
| VIT_15s0045g00490.t01 | Wine grape | cytosol | 34.3 | 39.07 |
| PGSC0003DMT400085417 | Potato | cytosol | 28.49 | 38.89 |
| PGSC0003DMT400093338 | Potato | cytosol | 37.79 | 38.69 |
| PGSC0003DMT400086770 | Potato | cytosol | 27.91 | 38.1 |
| GSMUA_Achr4P25740_001 | Banana | cytosol | 32.56 | 37.84 |
| Solyc03g093190.1.1 | Tomato | cytosol | 26.16 | 36.89 |
| GSMUA_Achr4P25750_001 | Banana | cytosol | 37.21 | 36.16 |
| Os02t0101600-00 | Rice | cytosol | 33.72 | 36.02 |
| Os07t0625500-01 | Rice | cytosol | 35.47 | 35.06 |
| Os07t0625600-00 | Rice | cytosol | 35.47 | 34.27 |
| Solyc11g008240.1.1 | Tomato | cytosol | 31.4 | 34.18 |
| Os07t0624900-00 | Rice | cytosol | 39.53 | 34.0 |
| KRH13748 | Soybean | cytosol | 36.05 | 33.88 |
| Os10t0438100-00 | Rice | cytosol | 43.02 | 33.64 |
| PGSC0003DMT400096074 | Potato | cytosol | 31.98 | 31.98 |
| Solyc11g008420.1.1 | Tomato | cytosol | 34.88 | 31.75 |
| PGSC0003DMT400019237 | Potato | cytosol | 34.88 | 31.75 |
Protein Annotations
| EntrezGene:107275529 | MapMan:19.2.2.8.1.1 | Gene3D:3.30.710.10 | ProteinID:BAD25950.1 | ProteinID:BAD26415.1 | ProteinID:BAT07191.1 |
| ProteinID:EAZ44011.1 | GO:GO:0006511 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009056 | GO:GO:0009987 |
| GO:GO:0019538 | EnsemblPlantsGene:Os09g0274800 | EnsemblPlants:Os09t0274800-00 | PFAM:PF01466 | PFAM:PF03931 | PIRSF:PIRSF028729 |
| PANTHER:PTHR11165 | PANTHER:PTHR11165:SF89 | UniProt:Q6H4D4 | InterPro:SKP1 | InterPro:SKP1-like | InterPro:SKP1-like_dim_sf |
| InterPro:SKP1/BTB/POZ_sf | SMART:SM00512 | SUPFAM:SSF54695 | SUPFAM:SSF81382 | InterPro:Skp1_comp_POZ | InterPro:Skp1_comp_dimer |
| UniParc:UPI00003B45A6 | RefSeq:XP_015611090.1 | SEG:seg | : | : | : |
Description
S-PHASE KINASE-ASSOCIATED PROTEIN1-LIKE PROTEIN 12, Oryza sativa SKP1-like gene 12SKP1-like protein. (Os09t0274800-00)
Coordinates
chr9:-:5594786..5595349
Molecular Weight (calculated)
18288.6 Da
IEP (calculated)
4.042
GRAVY (calculated)
-0.015
Length
172 amino acids
Sequence
(BLAST)
(BLAST)
001: MAASAAAADG AADGEKMILL ISSDGAKFEL SEAAASLSKT LGNMIEDDCA TNGAIPLANV ASDILAKVVE YCNKHAAATA TATAAAKASG EEELSKFDAE
101: FVSVDRKKLF GLINAANFLN MPCLLELTCQ RAADLIKDMM PEQVREVFGI ENDFTPEEEA EVRNENAWAY EM
101: FVSVDRKKLF GLINAANFLN MPCLLELTCQ RAADLIKDMM PEQVREVFGI ENDFTPEEEA EVRNENAWAY EM
001: MAETKKMIIL KSSDGESFEV EEAVAVESQT IKHMIEDDCV DNGIPLPNVT GAILAKVIEY CKKHVEAAAE AGGDKDFYGS TENHELKTWD NDFVKVDHPT
101: LFDLLRAANY LNISGLLDLT CKAVADQMRG KTPAQMREHF NIKNDYTPEE EAEVRNENRW AFE
101: LFDLLRAANY LNISGLLDLT CKAVADQMRG KTPAQMREHF NIKNDYTPEE EAEVRNENRW AFE
Arabidopsis Description
ASK3SKP1-like protein 3 [Source:UniProtKB/Swiss-Prot;Acc:Q9SL93]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.