CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
golgi 1
cytosol 3
plastid 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
OQU87046	Sorghum	cytosol	41.04	52.99
EES06093	Sorghum	cytosol	50.29	51.48
EES13900	Sorghum	cytosol	47.98	49.4
EES09697	Sorghum	cytosol	49.71	48.86
EER99267	Sorghum	cytosol	47.98	47.98
Os06t0113800-00	Rice	cytosol	44.51	46.39
VIT_19s0085g00180.t01	Wine grape	cytosol	40.46	46.05
Os09t0274800-00	Rice	cytosol	45.09	45.35
Os08t0375700-00	Rice	cytosol	42.77	43.79
Os08t0375500-00	Rice	cytosol	42.77	43.79
Os09t0412050-00	Rice	cytosol	42.2	43.45
Os09t0273800-01	Rice	cytosol	41.04	42.52
Solyc03g112710.1.1	Tomato	cytosol	36.42	41.72
PGSC0003DMT400088621	Potato	cytosol	27.75	41.03
PGSC0003DMT400038385	Potato	cytosol	35.26	40.4
PGSC0003DMT400088820	Potato	cytosol	35.26	40.4
CDY03015	Canola	cytosol	35.26	40.4
PGSC0003DMT400090609	Potato	cytosol	35.26	40.4
PGSC0003DMT400093573	Potato	cytosol	34.68	39.74
VIT_19s0085g00190.t01	Wine grape	cytosol	35.84	39.49
VIT_15s0045g00490.t01	Wine grape	cytosol	34.1	39.07
VIT_10s0003g05820.t01	Wine grape	cytosol	36.42	38.89
PGSC0003DMT400095953	Potato	cytosol	35.26	38.61
GSMUA_Achr4P25740_001	Banana	cytosol	32.95	38.51
PGSC0003DMT400093419	Potato	cytosol	33.53	38.41
Solyc11g008230.1.1	Tomato	cytosol	34.68	37.97
PGSC0003DMT400088220	Potato	cytosol	32.37	37.09
PGSC0003DMT400089461	Potato	cytosol	27.17	37.01
PGSC0003DMT400087694	Potato	cytosol	31.79	36.67
PGSC0003DMT400085417	Potato	cytosol	26.59	36.51
PGSC0003DMT400085217	Potato	cytosol	27.17	36.15
PGSC0003DMT400091657	Potato	cytosol	32.37	35.44
PGSC0003DMT400097239	Potato	cytosol	30.64	35.1
PGSC0003DMT400086770	Potato	cytosol	25.43	34.92
GSMUA_Achr4P25750_001	Banana	cytosol	35.26	34.46
PGSC0003DMT400088079	Potato	cytosol	22.54	33.91
PGSC0003DMT400019185	Potato	cytosol	35.26	33.89
Solyc03g093190.1.1	Tomato	cytosol	23.7	33.61
PGSC0003DMT400096238	Potato	cytosol	28.9	33.56
Solyc11g008400.1.1	Tomato	cytosol	34.1	32.78
PGSC0003DMT400090072	Potato	cytosol	19.08	32.35
PGSC0003DMT400093338	Potato	cytosol	31.21	32.14
Solyc11g008240.1.1	Tomato	cytosol	28.9	31.65
Solyc11g008420.1.1	Tomato	cytosol	31.79	29.1
KRH13748	Soybean	cytosol	30.64	28.96
PGSC0003DMT400019237	Potato	cytosol	30.06	27.51
EER94185	Sorghum	cytosol	32.37	26.54
PGSC0003DMT400096074	Potato	cytosol	26.01	26.16
OQU90298	Sorghum	cytosol	39.88	19.77

Protein Annotations

MapMan:19.2.2.8.1.1	Gene3D:3.30.710.10	EntrezGene:8061579	UniProt:A0A1W0VU84	GO:GO:0006511	GO:GO:0008150
GO:GO:0008152	GO:GO:0009056	GO:GO:0009987	GO:GO:0019538	EnsemblPlants:OQU76826	ProteinID:OQU76826
ProteinID:OQU76826.1	PFAM:PF01466	PFAM:PF03931	PIRSF:PIRSF028729	PANTHER:PTHR11165	PANTHER:PTHR11165:SF89
InterPro:SKP1	InterPro:SKP1-like	InterPro:SKP1-like_dim_sf	InterPro:SKP1/BTB/POZ_sf	SMART:SM00512	EnsemblPlantsGene:SORBI_3010G218900
SUPFAM:SSF54695	SUPFAM:SSF81382	InterPro:Skp1_comp_POZ	InterPro:Skp1_comp_dimer	UniParc:UPI0001A88ED7	RefSeq:XP_002437413.1
SEG:seg	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr10:+:56148744..56149659

Molecular Weight (calculated)

18691.0 Da

IEP (calculated)

4.478

GRAVY (calculated)

-0.314

Length

173 amino acids

Sequence
(BLAST)

001: MAAAAGSGGG SSSSSSGEEK TIVLVSSDIR ARFEVREAAA LLSKTVRRMI DEAGADASGD DGILLPEVDA KTLAKVLEYC NKHAPAGSSS SAAEEDLERF
101: DREFMHVDLG TLYSLTTASS YLKIEGLLNL TCKTIADMIK GKTPEQIRKM FGMTNELTTE EEDEVRRENT WAF

Best Arabidopsis Sequence Match ( AT4G34210.1 )
(BLAST)

001: MSSKMIVLMS SDGQSFEVEE AVAIQSQTIA HMVEDDCVAD GIPLANVESK ILVKVIEYCK KHHVDEANPI SEEDLNNWDE KFMDLEQSTI FELILAANYL
101: NIKSLLDLTC QTVADMIKGK TPEEIRSTFN IENDFTPEEE EAVRKENQWA FE

Arabidopsis Description

ASK11SKP1-like protein 11 [Source:UniProtKB/Swiss-Prot;Acc:O49484]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.