Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- golgi 1
- cytosol 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Os08t0375700-00 | Rice | cytosol | 98.22 | 98.22 |
| Os09t0274800-00 | Rice | cytosol | 68.64 | 67.44 |
| Os09t0273800-01 | Rice | cytosol | 62.72 | 63.47 |
| Os09t0412050-00 | Rice | cytosol | 59.76 | 60.12 |
| Os11t0456300-01 | Rice | plasma membrane | 56.8 | 55.49 |
| Os09t0539500-01 | Rice | cytosol, plasma membrane, plastid | 56.21 | 54.29 |
| Os06t0113800-00 | Rice | cytosol | 51.48 | 52.41 |
| CDY03015 | Canola | cytosol | 46.75 | 52.32 |
| PGSC0003DMT400088621 | Potato | cytosol | 35.5 | 51.28 |
| PGSC0003DMT400088820 | Potato | cytosol | 44.38 | 49.67 |
| PGSC0003DMT400038385 | Potato | cytosol | 43.2 | 48.34 |
| Solyc03g112710.1.1 | Tomato | cytosol | 43.2 | 48.34 |
| PGSC0003DMT400090609 | Potato | cytosol | 43.2 | 48.34 |
| PGSC0003DMT400093573 | Potato | cytosol | 42.6 | 47.68 |
| GSMUA_Achr4P25740_001 | Banana | cytosol | 40.83 | 46.62 |
| PGSC0003DMT400088220 | Potato | cytosol | 41.42 | 46.36 |
| PGSC0003DMT400087694 | Potato | cytosol | 40.83 | 46.0 |
| VIT_19s0085g00180.t01 | Wine grape | cytosol | 40.24 | 44.74 |
| PGSC0003DMT400093419 | Potato | cytosol | 39.65 | 44.37 |
| PGSC0003DMT400097239 | Potato | cytosol | 39.65 | 44.37 |
| Solyc11g008230.1.1 | Tomato | cytosol | 41.42 | 44.3 |
| Os09t0275200-01 | Rice | cytosol | 41.42 | 43.75 |
| PGSC0003DMT400091657 | Potato | cytosol | 40.83 | 43.67 |
| PGSC0003DMT400088079 | Potato | cytosol | 29.59 | 43.48 |
| PGSC0003DMT400089461 | Potato | cytosol | 32.54 | 43.31 |
| PGSC0003DMT400090072 | Potato | cytosol | 26.04 | 43.14 |
| PGSC0003DMT400095953 | Potato | cytosol | 40.24 | 43.04 |
| OQU76826 | Sorghum | cytosol | 43.79 | 42.77 |
| VIT_15s0045g00490.t01 | Wine grape | cytosol | 37.87 | 42.38 |
| PGSC0003DMT400085217 | Potato | cytosol | 32.54 | 42.31 |
| PGSC0003DMT400096238 | Potato | cytosol | 36.09 | 40.94 |
| PGSC0003DMT400086770 | Potato | cytosol | 30.18 | 40.48 |
| VIT_10s0003g05820.t01 | Wine grape | cytosol | 38.46 | 40.12 |
| PGSC0003DMT400093338 | Potato | cytosol | 39.65 | 39.88 |
| PGSC0003DMT400085417 | Potato | cytosol | 29.59 | 39.68 |
| VIT_19s0085g00190.t01 | Wine grape | cytosol | 36.69 | 39.49 |
| Solyc11g008400.1.1 | Tomato | cytosol | 42.01 | 39.44 |
| PGSC0003DMT400019185 | Potato | cytosol | 42.01 | 39.44 |
| Os07t0625600-00 | Rice | cytosol | 41.42 | 39.33 |
| Solyc11g008240.1.1 | Tomato | cytosol | 36.09 | 38.61 |
| GSMUA_Achr4P25750_001 | Banana | cytosol | 40.24 | 38.42 |
| Solyc03g093190.1.1 | Tomato | cytosol | 27.22 | 37.7 |
| KRH13748 | Soybean | cytosol | 40.24 | 37.16 |
| Os02t0101600-00 | Rice | cytosol | 33.73 | 35.4 |
| Os07t0624900-00 | Rice | cytosol | 39.65 | 33.5 |
| Os07t0625500-01 | Rice | cytosol | 34.32 | 33.33 |
| Os10t0438100-00 | Rice | cytosol | 43.2 | 33.18 |
| PGSC0003DMT400096074 | Potato | cytosol | 33.14 | 32.56 |
| PGSC0003DMT400019237 | Potato | cytosol | 36.09 | 32.28 |
| Solyc11g008420.1.1 | Tomato | cytosol | 35.5 | 31.75 |
Protein Annotations
| EntrezGene:107275970 | MapMan:19.2.2.8.1.1 | Gene3D:3.30.710.10 | ProteinID:BAD05286.1 | ProteinID:BAT05186.1 | ProteinID:EAZ42547.1 |
| GO:GO:0006511 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009056 | GO:GO:0009987 | GO:GO:0019538 |
| EnsemblPlantsGene:Os08g0375500 | EnsemblPlants:Os08t0375500-00 | PFAM:PF01466 | PFAM:PF03931 | PIRSF:PIRSF028729 | PANTHER:PTHR11165 |
| PANTHER:PTHR11165:SF89 | UniProt:Q6ZDJ1 | InterPro:SKP1 | InterPro:SKP1-like | InterPro:SKP1-like_dim_sf | InterPro:SKP1/BTB/POZ_sf |
| SMART:SM00512 | SUPFAM:SSF54695 | SUPFAM:SSF81382 | InterPro:Skp1_comp_POZ | InterPro:Skp1_comp_dimer | UniParc:UPI000022F1C4 |
| RefSeq:XP_015649612.1 | : | : | : | : | : |
Description
S-PHASE KINASE-ASSOCIATED PROTEIN1-LIKE PROTEIN 25, Oryza sativa SKP1-like gene 25Similar to Skp1-like protein 2. (Os08t0375500-00)
Coordinates
chr8:+:17617874..17618498
Molecular Weight (calculated)
18768.0 Da
IEP (calculated)
4.102
GRAVY (calculated)
-0.200
Length
169 amino acids
Sequence
(BLAST)
(BLAST)
001: MAATADNGEK MILLISSDGE RFELSEAAAS QSKTLSHMIE DDCTDNGVPL PNVTAVVLVK VVEYFKKHAA VTPKPATEAV VADKAKREEE LKSFDAEFVD
101: VDRTMLFELI LAANFLNAQD LLDLTCQHAA DLIKDMSVEE VREVFNITND FTPEEEAEVR KENAWAFDN
101: VDRTMLFELI LAANFLNAQD LLDLTCQHAA DLIKDMSVEE VREVFNITND FTPEEEAEVR KENAWAFDN
001: MAETKKMIIL KSSDGESFEI EEAVAVKSQT IKHMIEDDCA DNGIPLPNVT GAILAKVIEY CKKHVEAAAE AGGDKDFYGS AENDELKNWD SEFVKVDQPT
101: LFDLILAANY LNIGGLLDLT CKAVADQMRG KTPEQMRAHF NIKNDYTPEE EAEVRNENKW AFE
101: LFDLILAANY LNIGGLLDLT CKAVADQMRG KTPEQMRAHF NIKNDYTPEE EAEVRNENKW AFE
Arabidopsis Description
ASK4SK4 [Source:UniProtKB/TrEMBL;Acc:A0A178W187]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.