Factsheet for VIT_10s0003g05820.t01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
cytosol 4
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
OQU87046	Sorghum	cytosol	40.74	49.25
VIT_03s0038g02500.t01	Wine grape	cytosol	46.91	49.03
TraesCS6A01G000300.1	Wheat	cytosol	48.15	47.85
TraesCS6B01G004300.1	Wheat	cytosol	48.15	47.85
TraesCS2D01G560500.1	Wheat	cytosol	48.15	47.56
TraesCS4A01G366400.1	Wheat	cytosol	48.15	47.56
EER99267	Sorghum	cytosol	50.62	47.4
VIT_19s0085g00180.t01	Wine grape	cytosol	44.44	47.37
TraesCS2D01G560300.1	Wheat	cytosol	47.53	46.95
TraesCS2D01G560700.1	Wheat	cytosol	47.53	46.95
TraesCS3B01G566400.1	Wheat	cytosol	41.36	46.85
TraesCS6D01G044400.1	Wheat	cytosol	38.89	46.67
Solyc03g112710.1.1	Tomato	cytosol	43.21	46.36
TraesCS2D01G560400.1	Wheat	cytosol	46.91	46.34
TraesCS5A01G462800.1	Wheat	cytosol	38.27	46.27
TraesCS6D01G045500.1	Wheat	cytosol	48.15	46.15
TraesCS7D01G016900.1	Wheat	cytosol	48.15	46.15
TraesCS3B01G308600.1	Wheat	cytosol	46.3	46.01
TraesCS6B01G053400.1	Wheat	cytosol	38.89	45.99
TraesCS6D01G001600.1	Wheat	cytosol	49.38	45.71
PGSC0003DMT400090609	Potato	cytosol	42.59	45.7
TraesCS5B01G474100.1	Wheat	cytosol	45.68	45.68
Os11t0456300-01	Rice	plasma membrane	48.77	45.66
EES06093	Sorghum	cytosol	47.53	45.56
EES09697	Sorghum	cytosol	49.38	45.45
TraesCS7A01G498800.1	Wheat	cytosol	46.3	45.45
Zm00001d049230_P001	Maize	mitochondrion	49.38	45.45
TraesCS2B01G590600.1	Wheat	cytosol	48.77	45.4
TraesCS3D01G509600.1	Wheat	cytosol	48.15	45.35
TraesCS4A01G472600.1	Wheat	cytosol	48.15	45.35
TraesCS7A01G020600.1	Wheat	cytosol	48.15	45.35
TraesCS2D01G420100.1	Wheat	cytosol	48.15	44.57
TraesCS5D01G475400.1	Wheat	golgi, plastid, unclear	48.15	44.57
TraesCS5D01G475600.1	Wheat	cytosol	48.15	44.57
PGSC0003DMT400038385	Potato	cytosol	41.36	44.37
PGSC0003DMT400093573	Potato	cytosol	41.36	44.37
PGSC0003DMT400097239	Potato	cytosol	41.36	44.37
EES13900	Sorghum	cytosol	45.68	44.05
HORVU2Hr1G115410.2	Barley	cytosol	45.68	44.05
HORVU5Hr1G110840.1	Barley	cytosol	47.53	43.75
TraesCS2A01G522300.1	Wheat	cytosol	47.53	43.75
Os09t0539500-01	Rice	cytosol, plasma membrane, plastid	46.91	43.43
TraesCS7B01G098900.1	Wheat	cytosol	46.91	43.43
HORVU5Hr1G110720.2	Barley	cytosol	47.53	43.26
HORVU5Hr1G110850.1	Barley	cytosol	47.53	43.26
TraesCS2B01G442100.1	Wheat	mitochondrion	47.53	43.26
PGSC0003DMT400088820	Potato	cytosol	40.12	43.05
VIT_03s0038g02490.t01	Wine grape	mitochondrion	39.51	42.38
HORVU2Hr1G115400.1	Barley	cytosol	46.3	42.37
TraesCS7D01G194900.1	Wheat	cytosol	45.68	42.29
HORVU2Hr1G115380.1	Barley	cytosol	46.91	42.22
PGSC0003DMT400090072	Potato	cytosol	26.54	42.16
HORVU5Hr1G110760.2	Barley	cytosol	41.36	42.14
PGSC0003DMT400087694	Potato	cytosol	38.89	42.0
PGSC0003DMT400088621	Potato	cytosol	30.25	41.88
HORVU2Hr1G115420.1	Barley	cytosol	45.68	41.81
CDY03015	Canola	cytosol	38.89	41.72
PGSC0003DMT400088220	Potato	cytosol	38.89	41.72
VIT_15s0045g00490.t01	Wine grape	cytosol	38.89	41.72
HORVU3Hr1G089860.3	Barley	cytosol	46.3	41.67
HORVU5Hr1G110800.1	Barley	cytosol	45.68	41.57
HORVU5Hr1G110820.2	Barley	cytosol	45.68	41.57
HORVU5Hr1G110810.1	Barley	cytosol	39.51	41.56
HORVU7Hr1G099860.2	Barley	cytosol, mitochondrion, nucleus	44.44	41.14
HORVU7Hr1G099950.1	Barley	cytosol	43.83	41.04
Os06t0113800-00	Rice	cytosol	41.98	40.96
HORVU5Hr1G110830.3	Barley	cytosol	45.06	40.78
TraesCS2D01G524400.1	Wheat	cytosol	40.74	40.74
TraesCS5A01G093500.1	Wheat	cytosol	41.36	40.61
Solyc11g008230.1.1	Tomato	cytosol	39.51	40.51
TraesCS7A01G193600.1	Wheat	cytosol	33.95	40.44
PGSC0003DMT400093419	Potato	cytosol	37.65	40.4
HORVU7Hr1G103140.2	Barley	cytosol	44.44	40.0
TraesCS5B01G099600.1	Wheat	cytosol	43.21	40.0
PGSC0003DMT400095953	Potato	cytosol	38.89	39.87
Os09t0274800-00	Rice	cytosol	41.98	39.53
VIT_19s0085g00190.t01	Wine grape	cytosol	38.27	39.49
TraesCS5D01G379900.1	Wheat	cytosol	35.8	39.46
HORVU7Hr1G099840.1	Barley	cytosol	42.59	39.43
TraesCS6D01G002600.1	Wheat	cytosol	42.59	39.43
TraesCS4B01G337400.1	Wheat	cytosol	38.27	39.24
Zm00001d022618_P001	Maize	cytosol	41.36	39.18
VIT_18s0001g14860.t01	Wine grape	cytosol, mitochondrion	47.53	39.09
HORVU5Hr1G090360.1	Barley	cytosol	42.59	38.76
PGSC0003DMT400091657	Potato	cytosol	37.65	38.61
Os08t0375500-00	Rice	cytosol	40.12	38.46
Os08t0375700-00	Rice	cytosol	40.12	38.46
PGSC0003DMT400085217	Potato	cytosol	30.86	38.46
Zm00001d007590_P001	Maize	cytosol	44.44	38.3
TraesCS5B01G372700.1	Wheat	cytosol	38.27	38.27
TraesCS3D01G077800.1	Wheat	cytosol	39.51	38.1
TraesCS3B01G092200.1	Wheat	cytosol	38.89	37.95
HORVU5Hr1G110790.1	Barley	cytosol	24.07	37.86
TraesCS5D01G105800.1	Wheat	cytosol	33.95	37.67
PGSC0003DMT400096238	Potato	cytosol	34.57	37.58
Os09t0412050-00	Rice	cytosol	38.89	37.5
TraesCS6B01G024700.1	Wheat	cytosol	38.89	37.5
TraesCS7B01G492300.1	Wheat	cytosol	40.74	37.5
Zm00001d007586_P001	Maize	cytosol	44.44	37.5
PGSC0003DMT400088079	Potato	cytosol	26.54	37.39
GSMUA_Achr4P25750_001	Banana	cytosol	40.74	37.29
GSMUA_Achr4P25740_001	Banana	cytosol	33.95	37.16
TraesCS5B01G165700.1	Wheat	cytosol	40.12	37.14
Zm00001d007589_P001	Maize	cytosol	44.44	37.11
TraesCS7A01G565800.1	Wheat	cytosol	40.12	36.93
TraesCS7B01G492200.1	Wheat	cytosol	40.12	36.93
TraesCS3A01G374400.1	Wheat	cytosol	37.04	36.81
HORVU7Hr1G002220.1	Barley	cytosol, plastid	47.53	36.67
TraesCS5D01G173200.1	Wheat	cytosol	40.74	36.67
TraesCS6B01G008800.1	Wheat	cytosol	39.51	36.57
Os09t0273800-01	Rice	cytosol	37.65	36.53
PGSC0003DMT400085417	Potato	cytosol	28.4	36.51
Zm00001d007659_P001	Maize	cytosol	43.21	36.46
OQU76826	Sorghum	cytosol	38.89	36.42
TraesCS7B01G492400.1	Wheat	cytosol	39.51	36.36
TraesCS7B01G492500.1	Wheat	cytosol	39.51	36.36
TraesCS5A01G168900.1	Wheat	cytosol	40.74	36.26
TraesCS6A01G016900.1	Wheat	cytosol	39.51	35.96
PGSC0003DMT400086770	Potato	cytosol	27.78	35.71
PGSC0003DMT400093338	Potato	cytosol	37.04	35.71
TraesCS7D01G545000.2	Wheat	cytosol	37.65	35.67
PGSC0003DMT400019185	Potato	cytosol	39.51	35.56
Solyc11g008400.1.1	Tomato	cytosol	39.51	35.56
TraesCS1D01G201900.1	Wheat	cytosol	36.42	35.54
HORVU5Hr1G092210.1	Barley	cytosol	35.19	35.4
TraesCS3B01G406500.1	Wheat	cytosol	35.19	34.97
TraesCS2A01G574500.1	Wheat	cytosol	35.8	34.52
Os09t0275200-01	Rice	cytosol	33.95	34.38
TraesCS7D01G544900.1	Wheat	cytosol	30.25	34.27
PGSC0003DMT400089461	Potato	cytosol	26.54	33.86
Solyc03g093190.1.1	Tomato	cytosol	25.31	33.61
Solyc11g008240.1.1	Tomato	cytosol	32.72	33.54
TraesCS6A01G017300.1	Wheat	cytosol	32.1	33.33
TraesCS5D01G176900.1	Wheat	cytosol	40.12	33.16
Os07t0624900-00	Rice	cytosol	40.74	33.0
PGSC0003DMT400019237	Potato	cytosol	38.27	32.8
TraesCS7A01G565700.1	Wheat	cytosol	34.57	32.75
TraesCS6D01G020500.1	Wheat	cytosol	31.48	32.69
Os07t0625600-00	Rice	cytosol	35.8	32.58
TraesCS5B01G169700.1	Wheat	cytosol	39.51	32.0
TraesCS5A01G172300.1	Wheat	cytosol	38.89	31.98
Os07t0625500-01	Rice	cytosol	33.95	31.61
TraesCS4A01G379700.1	Wheat	cytosol	29.01	31.54
Solyc11g008420.1.1	Tomato	cytosol	35.19	30.16
PGSC0003DMT400096074	Potato	cytosol	31.48	29.65
HORVU7Hr1G099790.1	Barley	cytosol, plastid	35.19	28.93
Os10t0438100-00	Rice	cytosol	38.89	28.64
TraesCS1B01G156000.1	Wheat	cytosol	40.74	27.97
KRH13748	Soybean	cytosol	31.48	27.87
TraesCS1A01G129800.1	Wheat	cytosol	40.12	27.54
TraesCS1D01G138400.1	Wheat	cytosol	40.12	27.31
HORVU1Hr1G035930.1	Barley	cytosol	40.74	27.27
Zm00001d042677_P001	Maize	plastid	44.44	27.27
EER94185	Sorghum	cytosol	34.57	26.54
Os02t0101600-00	Rice	cytosol	25.31	25.47
HORVU3Hr1G074970.1	Barley	cytosol, nucleus	28.4	18.25
VIT_03s0038g02480.t01	Wine grape	cytosol	46.3	17.12
OQU90298	Sorghum	cytosol	36.42	16.91
TraesCS3B01G340200.1	Wheat	cytosol	33.33	12.95
TraesCS3D01G305500.1	Wheat	cytosol	34.57	10.96
TraesCS3B01G340100.1	Wheat	nucleus	34.57	10.77
TraesCS3A01G297000.1	Wheat	cytosol	35.19	10.75
VIT_00s0349g00030.t01	Wine grape	cytosol	33.33	2.12

Protein Annotations

EntrezGene:100266299	wikigene:100266299	MapMan:19.2.2.8.1.1	Gene3D:3.30.710.10	ProteinID:CBI31096	ProteinID:CBI31096.3
UniProt:D7TKS4	EMBL:FN595992	GO:GO:0006511	GO:GO:0008150	GO:GO:0008152	GO:GO:0009056
GO:GO:0009987	GO:GO:0019538	EntrezGene:LOC100266299	wikigene:LOC100266299	PFAM:PF01466	PFAM:PF03931
PIRSF:PIRSF028729	PANTHER:PTHR11165	PANTHER:PTHR11165:SF88	InterPro:SKP1	InterPro:SKP1-like	InterPro:SKP1-like_dim_sf
InterPro:SKP1/BTB/POZ_sf	SMART:SM00512	SUPFAM:SSF54695	SUPFAM:SSF81382	InterPro:Skp1_comp_POZ	InterPro:Skp1_comp_dimer
UniParc:UPI0001984257	ArrayExpress:VIT_10s0003g05820	EnsemblPlantsGene:VIT_10s0003g05820	EnsemblPlants:VIT_10s0003g05820.t01	RefSeq:XP_002269695	RefSeq:XP_002269695.1

Description

No Description!

Coordinates

chr10:-:10946040..10946529

Molecular Weight (calculated)

18904.6 Da

IEP (calculated)

4.501

GRAVY (calculated)

-0.359

Length

162 amino acids

Sequence
(BLAST)

001: MSTSQKILKL KSRDDVIFEV SEAAAFQSGM IKNMLKDDGA DDAIHIVEVE KRDVIPILEV DGRFLAMVIE YWNKHLSEKA SEDEIKRWDV EFVNKDQSLL
101: YHLIMAANYL DTPGLIELLC WRVAEMIKGR KPEEIRQTFN IKNDFSPEDE AEIYKQYAWA FE

Best Arabidopsis Sequence Match ( AT4G34210.1 )
(BLAST)

001: MSSKMIVLMS SDGQSFEVEE AVAIQSQTIA HMVEDDCVAD GIPLANVESK ILVKVIEYCK KHHVDEANPI SEEDLNNWDE KFMDLEQSTI FELILAANYL
101: NIKSLLDLTC QTVADMIKGK TPEEIRSTFN IENDFTPEEE EAVRKENQWA FE

Arabidopsis Description

ASK11SKP1-like protein 11 [Source:UniProtKB/Swiss-Prot;Acc:O49484]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.