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Barley
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Barley
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • cytosol 2
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, mitochondrion
MultiLoc:cytosol
WoLF PSORT:mitochondrion
YLoc:cytosol
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
HORVU5Hr1G110800.1 Barley cytosol 100.0 100.0
HORVU5Hr1G110830.3 Barley cytosol 99.44 98.88
HORVU5Hr1G110790.1 Barley cytosol 56.74 98.06
HORVU5Hr1G110760.2 Barley cytosol 87.08 97.48
HORVU5Hr1G110810.1 Barley cytosol 79.78 92.21
HORVU5Hr1G110840.1 Barley cytosol 90.45 91.48
HORVU5Hr1G090360.1 Barley cytosol 89.33 89.33
HORVU5Hr1G110720.2 Barley cytosol 78.65 78.65
HORVU5Hr1G110850.1 Barley cytosol 78.09 78.09
HORVU2Hr1G115400.1 Barley cytosol 74.72 75.14
HORVU3Hr1G089860.3 Barley cytosol 75.84 75.0
HORVU2Hr1G115380.1 Barley cytosol 75.28 74.44
HORVU2Hr1G115420.1 Barley cytosol 73.03 73.45
HORVU2Hr1G115410.2 Barley cytosol 68.54 72.62
HORVU7Hr1G103140.2 Barley cytosol 73.03 72.22
HORVU7Hr1G099950.1 Barley cytosol 65.17 67.05
TraesCS7A01G498800.1 Wheat cytosol 61.8 66.67
HORVU7Hr1G099860.2 Barley cytosol, mitochondrion, nucleus 65.17 66.29
TraesCS5B01G165700.1 Wheat cytosol 64.04 65.14
HORVU7Hr1G099840.1 Barley cytosol 64.04 65.14
TraesCS5D01G173200.1 Wheat cytosol 63.48 62.78
TraesCS5A01G168900.1 Wheat cytosol 64.04 62.64
HORVU7Hr1G002220.1 Barley cytosol, plastid 73.6 62.38
TraesCS5D01G176900.1 Wheat cytosol 63.48 57.65
CDY03015 Canola cytosol 48.88 57.62
Solyc03g112710.1.1 Tomato cytosol 48.31 56.95
TraesCS5B01G169700.1 Wheat cytosol 63.48 56.5
PGSC0003DMT400088621 Potato cytosol 37.08 56.41
PGSC0003DMT400093573 Potato cytosol 46.63 54.97
PGSC0003DMT400090609 Potato cytosol 46.63 54.97
PGSC0003DMT400038385 Potato cytosol 46.63 54.97
TraesCS5A01G172300.1 Wheat cytosol 60.67 54.82
PGSC0003DMT400090072 Potato cytosol 30.9 53.92
PGSC0003DMT400088820 Potato cytosol 45.51 53.64
PGSC0003DMT400088220 Potato cytosol 44.38 52.32
PGSC0003DMT400085217 Potato cytosol 38.2 52.31
PGSC0003DMT400093419 Potato cytosol 43.82 51.66
VIT_19s0085g00180.t01 Wine grape cytosol 43.82 51.32
Solyc11g008230.1.1 Tomato cytosol 45.51 51.27
PGSC0003DMT400097239 Potato cytosol 43.26 50.99
PGSC0003DMT400087694 Potato cytosol 42.7 50.67
PGSC0003DMT400088079 Potato cytosol 32.58 50.43
PGSC0003DMT400091657 Potato cytosol 43.26 48.73
HORVU7Hr1G099790.1 Barley cytosol, plastid 53.93 48.73
PGSC0003DMT400086770 Potato cytosol 34.27 48.41
GSMUA_Achr4P25740_001 Banana cytosol 39.89 47.97
PGSC0003DMT400096238 Potato cytosol 39.89 47.65
PGSC0003DMT400095953 Potato cytosol 42.13 47.47
PGSC0003DMT400085417 Potato cytosol 33.15 46.83
VIT_15s0045g00490.t01 Wine grape cytosol 39.33 46.36
VIT_10s0003g05820.t01 Wine grape cytosol 41.57 45.68
HORVU5Hr1G084140.4 Barley cytosol 61.8 45.45
HORVU5Hr1G092210.1 Barley cytosol 40.45 44.72
PGSC0003DMT400093338 Potato cytosol 42.13 44.64
PGSC0003DMT400019185 Potato cytosol 44.94 44.44
Solyc11g008400.1.1 Tomato cytosol 44.38 43.89
Solyc11g008240.1.1 Tomato cytosol 38.76 43.67
VIT_19s0085g00190.t01 Wine grape cytosol 38.2 43.31
GSMUA_Achr4P25750_001 Banana cytosol 42.7 42.94
PGSC0003DMT400089461 Potato cytosol 29.78 41.73
Solyc03g093190.1.1 Tomato cytosol 28.09 40.98
KRH13748 Soybean cytosol 40.45 39.34
PGSC0003DMT400096074 Potato cytosol 34.27 35.47
PGSC0003DMT400019237 Potato cytosol 35.96 33.86
Solyc11g008420.1.1 Tomato cytosol 34.83 32.8
HORVU1Hr1G035930.1 Barley cytosol 43.26 31.82
HORVU3Hr1G074970.1 Barley cytosol, nucleus 34.27 24.21
Protein Annotations
MapMan:19.2.2.8.1.1Gene3D:3.30.710.10UniProt:A0A287SPY9GO:GO:0006511GO:GO:0008150GO:GO:0008152
GO:GO:0009056GO:GO:0009987GO:GO:0019538EnsemblPlantsGene:HORVU5Hr1G110820EnsemblPlants:HORVU5Hr1G110820.2PFAM:PF01466
PFAM:PF03931PIRSF:PIRSF028729PANTHER:PTHR11165PANTHER:PTHR11165:SF89InterPro:SKP1InterPro:SKP1-like
InterPro:SKP1-like_dim_sfInterPro:SKP1/BTB/POZ_sfSMART:SM00512SUPFAM:SSF54695SUPFAM:SSF81382InterPro:Skp1_comp_POZ
InterPro:Skp1_comp_dimerUniParc:UPI000B462822SEG:seg:::
Description
No Description!
Coordinates
chrchr5H:+:634237655..634238188
Molecular Weight (calculated)
19539.8 Da
IEP (calculated)
4.191
GRAVY (calculated)
-0.428
Length
178 amino acids
Sequence
(BLAST)
001: MAAEEGEKKM IILKSSDGEE FEIEEAAAMG SQTIRHMIED GCADNGIPLP NVNAKILSKV IEYCKKHVQA NPKPADSDAA GNASSSASAA HEEPAAPTED
101: LKSFDAEFVK VDQATLFDLI QAANYLNIKG MLDLTCQTVA DMIKSKTVEE IRNTFNIVND FTPEEEAEIR RENQWAFD
Best Arabidopsis Sequence Match ( AT1G20140.1 )
(BLAST)
001: MAETKKMIIL KSSDGESFEI EEAVAVKSQT IKHMIEDDCA DNGIPLPNVT GAILAKVIEY CKKHVEAAAE AGGDKDFYGS AENDELKNWD SEFVKVDQPT
101: LFDLILAANY LNIGGLLDLT CKAVADQMRG KTPEQMRAHF NIKNDYTPEE EAEVRNENKW AFE
Arabidopsis Description
ASK4SK4 [Source:UniProtKB/TrEMBL;Acc:A0A178W187]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.