Subcellular Localization
min:
: max
Winner_takes_all: nucleus, cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| HORVU5Hr1G110790.1 | Barley | cytosol | 16.67 | 40.78 |
| TraesCS3B01G340200.1 | Wheat | cytosol | 64.68 | 39.09 |
| OQU90298 | Sorghum | cytosol | 53.17 | 38.4 |
| TraesCS3B01G340100.1 | Wheat | nucleus | 78.17 | 37.88 |
| HORVU5Hr1G110810.1 | Barley | cytosol | 22.62 | 37.01 |
| TraesCS3A01G297000.1 | Wheat | cytosol | 77.78 | 36.98 |
| PGSC0003DMT400088079 | Potato | cytosol | 16.67 | 36.52 |
| TraesCS3D01G305500.1 | Wheat | cytosol | 71.83 | 35.42 |
| PGSC0003DMT400085217 | Potato | cytosol | 18.25 | 35.38 |
| HORVU2Hr1G115410.2 | Barley | cytosol | 23.41 | 35.12 |
| HORVU5Hr1G110840.1 | Barley | cytosol | 24.21 | 34.66 |
| CDY03015 | Canola | cytosol | 20.63 | 34.44 |
| HORVU5Hr1G110800.1 | Barley | cytosol | 24.21 | 34.27 |
| HORVU5Hr1G110820.2 | Barley | cytosol | 24.21 | 34.27 |
| HORVU5Hr1G110830.3 | Barley | cytosol | 24.21 | 34.08 |
| HORVU5Hr1G110720.2 | Barley | cytosol | 23.81 | 33.71 |
| HORVU5Hr1G110850.1 | Barley | cytosol | 23.81 | 33.71 |
| HORVU7Hr1G103140.2 | Barley | cytosol | 23.81 | 33.33 |
| HORVU2Hr1G115380.1 | Barley | cytosol | 23.81 | 33.33 |
| HORVU3Hr1G089860.3 | Barley | cytosol | 23.41 | 32.78 |
| HORVU2Hr1G115400.1 | Barley | cytosol | 23.02 | 32.77 |
| HORVU5Hr1G090360.1 | Barley | cytosol | 23.02 | 32.58 |
| PGSC0003DMT400086770 | Potato | cytosol | 16.27 | 32.54 |
| PGSC0003DMT400085417 | Potato | cytosol | 16.27 | 32.54 |
| HORVU2Hr1G115420.1 | Barley | cytosol | 22.62 | 32.2 |
| HORVU5Hr1G110760.2 | Barley | cytosol | 20.24 | 32.08 |
| PGSC0003DMT400088621 | Potato | cytosol | 14.68 | 31.62 |
| HORVU7Hr1G099860.2 | Barley | cytosol, mitochondrion, nucleus | 21.83 | 31.43 |
| PGSC0003DMT400090072 | Potato | cytosol | 12.7 | 31.37 |
| PGSC0003DMT400038385 | Potato | cytosol | 18.65 | 31.13 |
| VIT_19s0085g00180.t01 | Wine grape | cytosol | 18.65 | 30.92 |
| HORVU7Hr1G099950.1 | Barley | cytosol | 21.03 | 30.64 |
| VIT_19s0085g00190.t01 | Wine grape | cytosol | 19.05 | 30.57 |
| PGSC0003DMT400088220 | Potato | cytosol | 17.86 | 29.8 |
| PGSC0003DMT400093419 | Potato | cytosol | 17.86 | 29.8 |
| HORVU7Hr1G099840.1 | Barley | cytosol | 20.63 | 29.71 |
| Solyc03g093190.1.1 | Tomato | cytosol | 14.29 | 29.51 |
| PGSC0003DMT400088820 | Potato | cytosol | 17.46 | 29.14 |
| PGSC0003DMT400090609 | Potato | cytosol | 17.46 | 29.14 |
| Solyc03g112710.1.1 | Tomato | cytosol | 17.46 | 29.14 |
| PGSC0003DMT400093573 | Potato | cytosol | 17.46 | 29.14 |
| PGSC0003DMT400097239 | Potato | cytosol | 17.46 | 29.14 |
| HORVU7Hr1G002220.1 | Barley | cytosol, plastid | 24.21 | 29.05 |
| PGSC0003DMT400096238 | Potato | cytosol | 17.06 | 28.86 |
| PGSC0003DMT400087694 | Potato | cytosol | 17.06 | 28.67 |
| VIT_15s0045g00490.t01 | Wine grape | cytosol | 17.06 | 28.48 |
| VIT_10s0003g05820.t01 | Wine grape | cytosol | 18.25 | 28.4 |
| Solyc11g008240.1.1 | Tomato | cytosol | 17.46 | 27.85 |
| PGSC0003DMT400019185 | Potato | cytosol | 19.84 | 27.78 |
| HORVU5Hr1G092210.1 | Barley | cytosol | 17.46 | 27.33 |
| Solyc11g008400.1.1 | Tomato | cytosol | 19.44 | 27.22 |
| Solyc11g008230.1.1 | Tomato | cytosol | 17.06 | 27.22 |
| PGSC0003DMT400095953 | Potato | cytosol | 16.27 | 25.95 |
| HORVU7Hr1G099790.1 | Barley | cytosol, plastid | 20.24 | 25.89 |
| PGSC0003DMT400093338 | Potato | cytosol | 17.06 | 25.6 |
| GSMUA_Achr4P25750_001 | Banana | cytosol | 17.46 | 24.86 |
| PGSC0003DMT400091657 | Potato | cytosol | 15.48 | 24.68 |
| HORVU5Hr1G084140.4 | Barley | cytosol | 23.41 | 24.38 |
| GSMUA_Achr4P25740_001 | Banana | cytosol | 13.89 | 23.65 |
| PGSC0003DMT400089461 | Potato | cytosol | 11.9 | 23.62 |
| PGSC0003DMT400019237 | Potato | cytosol | 16.27 | 21.69 |
| Solyc11g008420.1.1 | Tomato | cytosol | 15.48 | 20.63 |
| HORVU1Hr1G035930.1 | Barley | cytosol | 19.05 | 19.83 |
| KRH13748 | Soybean | cytosol | 13.89 | 19.13 |
| PGSC0003DMT400096074 | Potato | cytosol | 11.51 | 16.86 |
Protein Annotations
| EnsemblPlants:HORVU3Hr1G074970.1 | EnsemblPlantsGene:HORVU3Hr1G074970 | Gene3D:3.30.710.10 | GO:GO:0006511 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009056 | GO:GO:0009987 | GO:GO:0019538 | InterPro:SKP1-like | InterPro:SKP1-like_dim_sf | InterPro:SKP1/BTB/POZ_sf |
| InterPro:Skp1_comp_POZ | PANTHER:PTHR11165 | PANTHER:PTHR11165:SF90 | PFAM:PF03931 | SEG:seg | SMART:SM00512 |
| SUPFAM:SSF54695 | SUPFAM:SSF81382 | UniParc:UPI000B479E7B | UniProt:A0A287LPM3 | MapMan:19.2.2.8.1.1 | : |
Description
No Description!
Coordinates
chrchr3H:-:561006112..561007794
Molecular Weight (calculated)
27186.1 Da
IEP (calculated)
4.786
GRAVY (calculated)
-0.293
Length
252 amino acids
Sequence
(BLAST)
(BLAST)
001: ERATAEQKGE DQSASAKRGH KKKAEAEEAE GMFTWFSEIA LSEKGTAAAA EGARRERRRF RKTKGQRLEE NGARVVASEV VAGKKEIFFF KASAVITLES
101: SDGMLFMVSE EAAQLSVLLA DMIGEGCAGG IIQLPNVDAR ALATVIKYCN KHADAVLNHG ADEGSGSGNS EASEEALKEW DRKLVGGLSQ DALCDLISAA
201: NFLQIKGLVD AACQKVAIVD MINCKTPGQM QQIETEDMCT WFSGLAFSEN QW
101: SDGMLFMVSE EAAQLSVLLA DMIGEGCAGG IIQLPNVDAR ALATVIKYCN KHADAVLNHG ADEGSGSGNS EASEEALKEW DRKLVGGLSQ DALCDLISAA
201: NFLQIKGLVD AACQKVAIVD MINCKTPGQM QQIETEDMCT WFSGLAFSEN QW
001: MAETKKMIIL KSSDGESFEI EEAVAVKSQT IKHMIEDDCA DNGIPLPNVT GAILAKVIEY CKKHVEAAAE AGGDKDFYGS AENDELKNWD SEFVKVDQPT
101: LFDLILAANY LNIGGLLDLT CKAVADQMRG KTPEQMRAHF NIKNDYTPEE EAEVRNENKW AFE
101: LFDLILAANY LNIGGLLDLT CKAVADQMRG KTPEQMRAHF NIKNDYTPEE EAEVRNENKW AFE
Arabidopsis Description
ASK4SK4 [Source:UniProtKB/TrEMBL;Acc:A0A178W187]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.