Factsheet for TraesCS3D01G305500.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2
mitochondrion 1
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3B01G340200.1	Wheat	cytosol	73.97	90.65
TraesCS3A01G297000.1	Wheat	cytosol	90.8	87.55
HORVU3Hr1G074970.1	Barley	cytosol, nucleus	35.42	71.83
TraesCS2D01G560500.1	Wheat	cytosol	15.46	48.17
TraesCS2D01G560400.1	Wheat	cytosol	15.46	48.17
TraesCS7D01G016900.1	Wheat	cytosol	15.85	47.93
TraesCS2D01G560300.1	Wheat	cytosol	15.26	47.56
TraesCS2D01G560700.1	Wheat	cytosol	15.26	47.56
OQU90298	Sorghum	cytosol	32.09	46.99
TraesCS6D01G001600.1	Wheat	cytosol	15.85	46.29
TraesCS6D01G045500.1	Wheat	cytosol	15.26	46.15
TraesCS6D01G044400.1	Wheat	cytosol	12.13	45.93
PGSC0003DMT400088621	Potato	cytosol	10.37	45.3
TraesCS7D01G194900.1	Wheat	cytosol	15.46	45.14
TraesCS2D01G420100.1	Wheat	cytosol	15.46	45.14
TraesCS3D01G509600.1	Wheat	cytosol	15.07	44.77
TraesCS5D01G475400.1	Wheat	golgi, plastid, unclear	15.26	44.57
TraesCS5D01G475600.1	Wheat	cytosol	15.26	44.57
CDY03015	Canola	cytosol	12.92	43.71
PGSC0003DMT400038385	Potato	cytosol	12.92	43.71
TraesCS5D01G176900.1	Wheat	cytosol	16.63	43.37
TraesCS3D01G016600.1	Wheat	cytosol	13.89	43.03
PGSC0003DMT400090609	Potato	cytosol	12.33	41.72
PGSC0003DMT400093573	Potato	cytosol	12.33	41.72
PGSC0003DMT400088820	Potato	cytosol	12.33	41.72
TraesCS5D01G337100.1	Wheat	cytosol	13.5	41.57
TraesCS5D01G337000.1	Wheat	cytosol	13.5	41.57
TraesCS5D01G173200.1	Wheat	cytosol	14.48	41.11
Solyc03g112710.1.1	Tomato	cytosol	12.13	41.06
PGSC0003DMT400088220	Potato	cytosol	11.94	40.4
PGSC0003DMT400093419	Potato	cytosol	11.94	40.4
VIT_19s0085g00180.t01	Wine grape	cytosol	11.94	40.13
PGSC0003DMT400097239	Potato	cytosol	11.74	39.74
PGSC0003DMT400087694	Potato	cytosol	11.55	39.33
TraesCS3D01G077800.1	Wheat	cytosol	12.92	39.29
TraesCS1D01G201900.1	Wheat	cytosol	12.72	39.16
VIT_15s0045g00490.t01	Wine grape	cytosol	11.35	38.41
PGSC0003DMT400096238	Potato	cytosol	11.15	38.26
VIT_19s0085g00190.t01	Wine grape	cytosol	11.74	38.22
TraesCS6D01G002600.1	Wheat	cytosol	12.92	37.71
PGSC0003DMT400085217	Potato	cytosol	9.59	37.69
TraesCS2D01G524400.1	Wheat	cytosol	11.94	37.65
TraesCS5D01G105800.1	Wheat	cytosol	10.37	36.3
PGSC0003DMT400019185	Potato	cytosol	12.72	36.11
PGSC0003DMT400093338	Potato	cytosol	11.74	35.71
TraesCS7D01G544900.1	Wheat	cytosol	9.98	35.66
PGSC0003DMT400088079	Potato	cytosol	8.02	35.65
GSMUA_Achr4P25750_001	Banana	cytosol	12.33	35.59
Solyc11g008400.1.1	Tomato	cytosol	12.52	35.56
Solyc11g008230.1.1	Tomato	cytosol	10.96	35.44
TraesCS5D01G379900.1	Wheat	cytosol	10.18	35.37
TraesCS7D01G545000.2	Wheat	cytosol	11.74	35.09
Solyc11g008240.1.1	Tomato	cytosol	10.76	34.81
PGSC0003DMT400095953	Potato	cytosol	10.76	34.81
TraesCS6D01G020500.1	Wheat	cytosol	10.57	34.62
VIT_10s0003g05820.t01	Wine grape	cytosol	10.96	34.57
PGSC0003DMT400085417	Potato	cytosol	8.41	34.13
PGSC0003DMT400086770	Potato	cytosol	8.41	34.13
PGSC0003DMT400091657	Potato	cytosol	10.18	32.91
Solyc03g093190.1.1	Tomato	cytosol	7.83	32.79
TraesCS5D01G337200.1	Wheat	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, plastid, vacuole	15.46	31.98
GSMUA_Achr4P25740_001	Banana	cytosol	9.2	31.76
PGSC0003DMT400089461	Potato	cytosol	7.83	31.5
PGSC0003DMT400090072	Potato	cytosol	6.07	30.39
TraesCS1D01G138400.1	Wheat	cytosol	13.31	28.57
PGSC0003DMT400019237	Potato	cytosol	10.57	28.57
KRH13748	Soybean	cytosol	10.18	28.42
Solyc11g008420.1.1	Tomato	cytosol	9.98	26.98
PGSC0003DMT400096074	Potato	cytosol	9.0	26.74

Protein Annotations

MapMan:19.2.2.8.1.1	Gene3D:3.30.710.10	ncoils:Coil	GO:GO:0006511	GO:GO:0008150	GO:GO:0008152
GO:GO:0009056	GO:GO:0009987	GO:GO:0019538	PFAM:PF01466	PFAM:PF03931	PANTHER:PTHR11165
PANTHER:PTHR11165:SF90	InterPro:SKP1-like	InterPro:SKP1-like_dim_sf	InterPro:SKP1/BTB/POZ_sf	SMART:SM00512	SUPFAM:SSF54695
SUPFAM:SSF81382	InterPro:Skp1_comp_POZ	InterPro:Skp1_comp_dimer	EnsemblPlantsGene:TraesCS3D01G305500	EnsemblPlants:TraesCS3D01G305500.1	SEG:seg

Description

No Description!

Coordinates

chr3D:+:419559903..419561537

Molecular Weight (calculated)

54779.8 Da

IEP (calculated)

4.368

GRAVY (calculated)

-0.526

Length

511 amino acids

Sequence
(BLAST)

001: MAAEEKQEMG AGAAPGEKGP TTGDKAMGKT GATEEMKGDA AADKQKGSTA EKEEKGATAG DEEKGDEEEE AEQKGENQSA SAKRGHKKKA EAEETAAENG
101: AAATERERRE RQSFSRTKGQ RPEEKGAMEE VAGKKEIFFF KASAVITLES SDGMLFTVSE EAARLSVPLA DMIDQGCAEG IIQLPNVDAT ALATVIEYCN
201: KHADAASANS RANEGGSSCN SEASVEALME WDRKLVDGLS QDALCDVIIA AKFLRIKGLF DAACQKVAVV DMVNSKTPGQ MHQIEEEDMC TWFSGLTPFS
301: EKGTAAAEGA RTNGQRPEEK GAMAEEKEQV AGENDTFFFR ASGKIITLKS SDGMLFKVSE AAARLSVVLA DMIDQDCAKG IIQLPNVDAR ALATVIEYCN
401: EHADATATAN PDANHGVAEG SSSCNSEASS EVLKEWDRKL VDGLSQDALY DLIMAVNFLH IKGLLDAACQ KVADMIKGKS VEQTRKMFGI ATDFTEEEEE
501: ELRKESPWAF E

Best Arabidopsis Sequence Match ( AT3G21860.1 )
(BLAST)

001: MSTKKIILKS SDGHSFEVEE EAACQCQTIA HMSEDDCTDN GIPLPEVTGK ILEMVIEYCN KHHVDAANPC SDEDLKKWDK EFMEKYQSTI FDLIMAANYL
101: NIKSLLDLAC QTVADMIKDN TVEHTRKFFN IENDYTHEEE EAVRRENQWG FE

Arabidopsis Description

ASK10SKP1-like protein 10 [Source:UniProtKB/Swiss-Prot;Acc:Q9LSX8]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.