Factsheet for TraesCS3D01G016600.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2
mitochondrion 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	mitochondrion
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3B01G027600.1	Wheat	cytosol	93.94	93.94
TraesCS5D01G337100.1	Wheat	cytosol	73.94	73.49
TraesCS5D01G337000.1	Wheat	cytosol	70.91	70.48
TraesCS2D01G560500.1	Wheat	cytosol	66.06	66.46
TraesCS2D01G560400.1	Wheat	cytosol	65.45	65.85
TraesCS2D01G560300.1	Wheat	cytosol	64.85	65.24
TraesCS7D01G016900.1	Wheat	cytosol	65.45	63.91
TraesCS6D01G001600.1	Wheat	cytosol	67.27	63.43
TraesCS2D01G560700.1	Wheat	cytosol	63.03	63.41
TraesCS5D01G475400.1	Wheat	golgi, plastid, unclear	66.67	62.86
TraesCS6D01G045500.1	Wheat	cytosol	64.24	62.72
TraesCS5D01G475600.1	Wheat	cytosol	65.45	61.71
TraesCS3D01G509600.1	Wheat	cytosol	64.24	61.63
TraesCS6D01G044400.1	Wheat	cytosol	50.3	61.48
TraesCS7D01G194900.1	Wheat	cytosol	64.85	61.14
TraesCS2D01G420100.1	Wheat	cytosol	64.85	61.14
TraesCS2D01G524400.1	Wheat	cytosol	55.15	56.17
TraesCS5D01G105800.1	Wheat	cytosol	47.27	53.42
TraesCS6D01G002600.1	Wheat	cytosol	55.76	52.57
TraesCS7D01G544900.1	Wheat	cytosol	45.45	52.45
TraesCS5D01G173200.1	Wheat	cytosol	56.97	52.22
TraesCS7D01G545000.2	Wheat	cytosol	52.73	50.88
TraesCS3D01G077800.1	Wheat	cytosol	47.88	47.02
TraesCS5D01G379900.1	Wheat	cytosol	41.21	46.26
TraesCS6D01G020500.1	Wheat	cytosol	43.64	46.15
TraesCS5D01G176900.1	Wheat	cytosol	54.55	45.92
TraesCS5D01G337200.1	Wheat	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, plastid, vacuole	67.27	44.94
TraesCS1D01G201900.1	Wheat	cytosol	43.03	42.77
TraesCS1D01G138400.1	Wheat	cytosol	45.45	31.51
TraesCS3D01G305500.1	Wheat	cytosol	43.03	13.89

Protein Annotations

MapMan:19.2.2.8.1.1	Gene3D:3.30.710.10	GO:GO:0006511	GO:GO:0008150	GO:GO:0008152	GO:GO:0009056
GO:GO:0009987	GO:GO:0019538	PFAM:PF01466	PFAM:PF03931	PIRSF:PIRSF028729	PANTHER:PTHR11165
PANTHER:PTHR11165:SF89	InterPro:SKP1	InterPro:SKP1-like	InterPro:SKP1-like_dim_sf	InterPro:SKP1/BTB/POZ_sf	SMART:SM00512
SUPFAM:SSF54695	SUPFAM:SSF81382	InterPro:Skp1_comp_POZ	InterPro:Skp1_comp_dimer	EnsemblPlantsGene:TraesCS3D01G016600	EnsemblPlants:TraesCS3D01G016600.1
SEG:seg	:	:	:	:	:

Description

No Description!

Coordinates

chr3D:+:5802877..5804178

Molecular Weight (calculated)

18638.0 Da

IEP (calculated)

4.442

GRAVY (calculated)

-0.516

Length

165 amino acids

Sequence
(BLAST)

001: MADTAGTAER KLTLKSADGE EFVVEEAVAT ESQTIKHIVE DGCANNIIPL PNVNAKILDM VIKYCRQHVQ NRGGDAADPT AKASEPDLKT FDDKFIDVDQ
101: QIRFDLILAA NYLNIKGLLD LTCQKVADMM KGRTVEEIRK TFDIKNDFTK EEEEEVRKEN QWAFE

Best Arabidopsis Sequence Match ( AT1G20140.1 )
(BLAST)

001: MAETKKMIIL KSSDGESFEI EEAVAVKSQT IKHMIEDDCA DNGIPLPNVT GAILAKVIEY CKKHVEAAAE AGGDKDFYGS AENDELKNWD SEFVKVDQPT
101: LFDLILAANY LNIGGLLDLT CKAVADQMRG KTPEQMRAHF NIKNDYTPEE EAEVRNENKW AFE

Arabidopsis Description

ASK4SK4 [Source:UniProtKB/TrEMBL;Acc:A0A178W187]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.