Factsheet for TraesCS5D01G173200.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2
mitochondrion 2
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, plastid
MultiLoc:	cytosol
PProwler:	mitochondrion
TargetP:	plastid
WoLF PSORT:	mitochondrion
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5B01G165700.1	Wheat	cytosol	93.33	96.0
TraesCS5A01G168900.1	Wheat	cytosol	96.11	95.05
TraesCS2D01G560500.1	Wheat	cytosol	63.33	69.51
TraesCS2D01G560700.1	Wheat	cytosol	62.22	68.29
TraesCS2D01G560300.1	Wheat	cytosol	62.22	68.29
TraesCS2D01G560400.1	Wheat	cytosol	61.67	67.68
HORVU5Hr1G110810.1	Barley	cytosol	57.22	66.88
HORVU5Hr1G110790.1	Barley	cytosol	37.78	66.02
TraesCS7D01G016900.1	Wheat	cytosol	61.67	65.68
TraesCS6D01G045500.1	Wheat	cytosol	61.67	65.68
TraesCS5D01G475400.1	Wheat	golgi, plastid, unclear	63.33	65.14
HORVU5Hr1G110840.1	Barley	cytosol	63.33	64.77
TraesCS2D01G420100.1	Wheat	cytosol	62.78	64.57
TraesCS5D01G475600.1	Wheat	cytosol	62.78	64.57
TraesCS3D01G509600.1	Wheat	cytosol	61.67	64.53
TraesCS6D01G001600.1	Wheat	cytosol	62.22	64.0
TraesCS5D01G176900.1	Wheat	cytosol	69.44	63.78
HORVU5Hr1G110800.1	Barley	cytosol	62.78	63.48
HORVU5Hr1G110820.2	Barley	cytosol	62.78	63.48
TraesCS6D01G044400.1	Wheat	cytosol	47.22	62.96
HORVU5Hr1G110760.2	Barley	cytosol	55.56	62.89
HORVU5Hr1G110830.3	Barley	cytosol	62.22	62.57
HORVU5Hr1G090360.1	Barley	cytosol	61.67	62.36
TraesCS7D01G194900.1	Wheat	cytosol	59.44	61.14
TraesCS3D01G016600.1	Wheat	cytosol	52.22	56.97
TraesCS2D01G524400.1	Wheat	cytosol	49.44	54.94
TraesCS5D01G105800.1	Wheat	cytosol	43.89	54.11
PGSC0003DMT400088621	Potato	cytosol	35.0	53.85
TraesCS5D01G337100.1	Wheat	cytosol	49.44	53.61
TraesCS6D01G002600.1	Wheat	cytosol	50.56	52.0
TraesCS5D01G337000.1	Wheat	cytosol	47.78	51.81
TraesCS7D01G544900.1	Wheat	cytosol	41.11	51.75
Solyc03g112710.1.1	Tomato	cytosol	43.33	51.66
TraesCS7D01G545000.2	Wheat	cytosol	48.89	51.46
PGSC0003DMT400088820	Potato	cytosol	42.22	50.33
PGSC0003DMT400038385	Potato	cytosol	42.22	50.33
PGSC0003DMT400090609	Potato	cytosol	41.67	49.67
CDY03015	Canola	cytosol	41.67	49.67
PGSC0003DMT400093573	Potato	cytosol	41.11	49.01
VIT_19s0085g00180.t01	Wine grape	cytosol	40.56	48.03
PGSC0003DMT400088220	Potato	cytosol	40.0	47.68
PGSC0003DMT400087694	Potato	cytosol	39.44	47.33
PGSC0003DMT400093419	Potato	cytosol	39.44	47.02
TraesCS3D01G077800.1	Wheat	cytosol	43.33	46.43
PGSC0003DMT400097239	Potato	cytosol	38.89	46.36
TraesCS5D01G379900.1	Wheat	cytosol	37.78	46.26
TraesCS6D01G020500.1	Wheat	cytosol	40.0	46.15
PGSC0003DMT400086770	Potato	cytosol	31.67	45.24
PGSC0003DMT400088079	Potato	cytosol	28.89	45.22
PGSC0003DMT400085217	Potato	cytosol	32.22	44.62
TraesCS1D01G201900.1	Wheat	cytosol	41.11	44.58
PGSC0003DMT400019185	Potato	cytosol	44.44	44.44
VIT_15s0045g00490.t01	Wine grape	cytosol	37.22	44.37
PGSC0003DMT400090072	Potato	cytosol	25.0	44.12
GSMUA_Achr4P25740_001	Banana	cytosol	36.11	43.92
Solyc11g008400.1.1	Tomato	cytosol	43.89	43.89
Solyc11g008230.1.1	Tomato	cytosol	38.33	43.67
PGSC0003DMT400085417	Potato	cytosol	30.56	43.65
VIT_19s0085g00190.t01	Wine grape	cytosol	37.78	43.31
PGSC0003DMT400096238	Potato	cytosol	35.56	42.95
TraesCS5D01G337200.1	Wheat	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, plastid, vacuole	57.78	42.11
PGSC0003DMT400095953	Potato	cytosol	36.11	41.14
VIT_10s0003g05820.t01	Wine grape	cytosol	36.67	40.74
PGSC0003DMT400091657	Potato	cytosol	35.0	39.87
PGSC0003DMT400093338	Potato	cytosol	36.67	39.29
GSMUA_Achr4P25750_001	Banana	cytosol	38.33	38.98
Solyc11g008240.1.1	Tomato	cytosol	33.89	38.61
PGSC0003DMT400089461	Potato	cytosol	27.22	38.58
Solyc03g093190.1.1	Tomato	cytosol	24.44	36.07
KRH13748	Soybean	cytosol	35.56	34.97
PGSC0003DMT400096074	Potato	cytosol	31.67	33.14
PGSC0003DMT400019237	Potato	cytosol	32.22	30.69
TraesCS1D01G138400.1	Wheat	cytosol	40.56	30.67
Solyc11g008420.1.1	Tomato	cytosol	30.56	29.1
TraesCS3D01G305500.1	Wheat	cytosol	41.11	14.48

Protein Annotations

MapMan:19.2.2.8.1.1	Gene3D:3.30.710.10	GO:GO:0006511	GO:GO:0008150	GO:GO:0008152	GO:GO:0009056
GO:GO:0009987	GO:GO:0019538	PFAM:PF01466	PFAM:PF03931	PIRSF:PIRSF028729	PANTHER:PTHR11165
PANTHER:PTHR11165:SF89	InterPro:SKP1	InterPro:SKP1-like	InterPro:SKP1-like_dim_sf	InterPro:SKP1/BTB/POZ_sf	SMART:SM00512
SUPFAM:SSF54695	SUPFAM:SSF81382	InterPro:Skp1_comp_POZ	InterPro:Skp1_comp_dimer	EnsemblPlantsGene:TraesCS5D01G173200	EnsemblPlants:TraesCS5D01G173200.1
SEG:seg	:	:	:	:	:

Description

No Description!

Coordinates

chr5D:-:270258512..270259054

Molecular Weight (calculated)

19387.7 Da

IEP (calculated)

4.090

GRAVY (calculated)

-0.266

Length

180 amino acids

Sequence
(BLAST)

001: MASTAADASS SGEVAAMGDK SNKMFTLISS DGESFEVTEE VGKMSQTIKH MIEDGCADNG IPLPNVPAKT LSKVIEYCNK HVVAAAAGDD DNNASAGEKE
101: DLKSFDAKFI AVDQATLFDL ILAANYLDVK GLLDLSCQTA ADMVKGQPVE GIRKMFNLEN DFTPEEEAEI RRENPWAFDL

Best Arabidopsis Sequence Match ( AT1G20140.1 )
(BLAST)

001: MAETKKMIIL KSSDGESFEI EEAVAVKSQT IKHMIEDDCA DNGIPLPNVT GAILAKVIEY CKKHVEAAAE AGGDKDFYGS AENDELKNWD SEFVKVDQPT
101: LFDLILAANY LNIGGLLDLT CKAVADQMRG KTPEQMRAHF NIKNDYTPEE EAEVRNENKW AFE

Arabidopsis Description

ASK4SK4 [Source:UniProtKB/TrEMBL;Acc:A0A178W187]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.