Factsheet for TraesCS5D01G337200.1

Subcellular Localization

min:

: max

Winner_takes_all: extracellular, endoplasmic reticulum, vacuole, plastid, cytosol, plasma membrane, golgi

Predictor Summary:

plastid 2
extracellular 4
endoplasmic reticulum 4
vacuole 4
plasma membrane 4
golgi 4
cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, plastid, secretory
Any Predictor:	cytosol, plastid, secretory
ChloroP:	plastid
iPSORT:	secretory
MultiLoc:	cytosol
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5A01G331300.1	Wheat	cytosol	65.18	96.99
TraesCS5B01G331700.1	Wheat	cytosol	65.59	95.86
TraesCS2D01G560700.1	Wheat	cytosol	49.39	74.39
TraesCS2D01G560500.1	Wheat	cytosol	48.99	73.78
TraesCS7D01G016900.1	Wheat	cytosol	50.2	73.37
TraesCS2D01G560400.1	Wheat	cytosol	48.18	72.56
TraesCS2D01G560300.1	Wheat	cytosol	47.77	71.95
TraesCS6D01G001600.1	Wheat	cytosol	50.2	70.86
TraesCS6D01G045500.1	Wheat	cytosol	48.18	70.41
TraesCS5D01G475600.1	Wheat	cytosol	49.39	69.71
TraesCS5D01G475400.1	Wheat	golgi, plastid, unclear	48.99	69.14
TraesCS3D01G509600.1	Wheat	cytosol	47.77	68.6
TraesCS2D01G420100.1	Wheat	cytosol	48.58	68.57
TraesCS7D01G194900.1	Wheat	cytosol	48.18	68.0
TraesCS3D01G016600.1	Wheat	cytosol	44.94	67.27
TraesCS6D01G044400.1	Wheat	cytosol	36.44	66.67
TraesCS5D01G337100.1	Wheat	cytosol	44.13	65.66
HORVU5Hr1G084140.4	Barley	cytosol	63.16	64.46
TraesCS5D01G337000.1	Wheat	cytosol	42.91	63.86
TraesCS2D01G524400.1	Wheat	cytosol	41.7	63.58
TraesCS5D01G173200.1	Wheat	cytosol	42.11	57.78
TraesCS6D01G002600.1	Wheat	cytosol	39.68	56.0
TraesCS5D01G105800.1	Wheat	cytosol	32.79	55.48
TraesCS7D01G544900.1	Wheat	cytosol	31.98	55.24
TraesCS7D01G545000.2	Wheat	cytosol	37.25	53.8
TraesCS5D01G176900.1	Wheat	cytosol	40.89	51.53
TraesCS3D01G077800.1	Wheat	cytosol	34.82	51.19
TraesCS5D01G379900.1	Wheat	cytosol	30.36	51.02
TraesCS6D01G020500.1	Wheat	cytosol	31.58	50.0
TraesCS1D01G201900.1	Wheat	cytosol	32.39	48.19
TraesCS1D01G138400.1	Wheat	cytosol	32.39	33.61
TraesCS3D01G305500.1	Wheat	cytosol	31.98	15.46

Protein Annotations

MapMan:19.2.2.8.1.1	Gene3D:3.30.710.10	GO:GO:0006511	GO:GO:0008150	GO:GO:0008152	GO:GO:0009056
GO:GO:0009987	GO:GO:0019538	PFAM:PF01466	PFAM:PF03931	PANTHER:PTHR11165	PANTHER:PTHR11165:SF89
InterPro:SKP1-like	InterPro:SKP1-like_dim_sf	InterPro:SKP1/BTB/POZ_sf	SMART:SM00512	SUPFAM:SSF54695	SUPFAM:SSF81382
SignalP:SignalP-noTM	InterPro:Skp1_comp_POZ	InterPro:Skp1_comp_dimer	EnsemblPlantsGene:TraesCS5D01G337200	EnsemblPlants:TraesCS5D01G337200.1	SEG:seg

Description

No Description!

Coordinates

chr5D:-:426162374..426165380

Molecular Weight (calculated)

26841.2 Da

IEP (calculated)

5.009

GRAVY (calculated)

-0.196

Length

247 amino acids

Sequence
(BLAST)

001: MLDRTVLFSF ALHMSGLMCY IVCKSSAVCR LCSSVQRRPP SPPFQSTPPQ PPLASAPRVS RRAPPPKPSL PTSPAIGPMA ASAAAKKLTL KSSDGEDFEV
101: EVAVAMASQT IKHMVEDGCA DNIIPLPNVT AKILSKVIEY CTQHAPKADD AAAADSTGTA TAVKPDEEKL KAFDTEFVKV EQATLFDLIL AANYLDIKGL
201: LDLTCQTVAD MIKGKTPEEI RKTFNITNDF TPEEEEEVRK ENQWAFE

Best Arabidopsis Sequence Match ( AT1G20140.1 )
(BLAST)

001: MAETKKMIIL KSSDGESFEI EEAVAVKSQT IKHMIEDDCA DNGIPLPNVT GAILAKVIEY CKKHVEAAAE AGGDKDFYGS AENDELKNWD SEFVKVDQPT
101: LFDLILAANY LNIGGLLDLT CKAVADQMRG KTPEQMRAHF NIKNDYTPEE EAEVRNENKW AFE

Arabidopsis Description

ASK4SK4 [Source:UniProtKB/TrEMBL;Acc:A0A178W187]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.