Factsheet for TraesCS5D01G379900.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5B01G372700.1	Wheat	cytosol	95.92	87.04
HORVU5Hr1G092210.1	Barley	cytosol	78.91	72.05
TraesCS2A01G574500.1	Wheat	cytosol	62.59	54.76
TraesCS3D01G077800.1	Wheat	cytosol	57.82	50.6
TraesCS1D01G201900.1	Wheat	cytosol	53.74	47.59
TraesCS7D01G016900.1	Wheat	cytosol	54.42	47.34
TraesCS2D01G560500.1	Wheat	cytosol	48.98	43.9
TraesCS6D01G001600.1	Wheat	cytosol	51.7	43.43
TraesCS2D01G560700.1	Wheat	cytosol	48.3	43.29
TraesCS2D01G560400.1	Wheat	cytosol	48.3	43.29
TraesCS2D01G560300.1	Wheat	cytosol	47.62	42.68
TraesCS6D01G044400.1	Wheat	cytosol	38.78	42.22
TraesCS3D01G016600.1	Wheat	cytosol	46.26	41.21
TraesCS6D01G045500.1	Wheat	cytosol	46.94	40.83
TraesCS7D01G194900.1	Wheat	cytosol	48.3	40.57
TraesCS2D01G420100.1	Wheat	cytosol	48.3	40.57
TraesCS5D01G475600.1	Wheat	cytosol	48.3	40.57
TraesCS5D01G475400.1	Wheat	golgi, plastid, unclear	48.3	40.57
TraesCS3D01G509600.1	Wheat	cytosol	46.94	40.12
Os09t0275200-01	Rice	cytosol	43.54	40.0
TraesCS5D01G337100.1	Wheat	cytosol	44.22	39.16
TraesCS5D01G337000.1	Wheat	cytosol	44.22	39.16
PGSC0003DMT400088621	Potato	cytosol	30.61	38.46
VIT_19s0085g00180.t01	Wine grape	cytosol	39.46	38.16
TraesCS5D01G173200.1	Wheat	cytosol	46.26	37.78
PGSC0003DMT400093573	Potato	cytosol	38.78	37.75
Solyc03g112710.1.1	Tomato	cytosol	38.78	37.75
PGSC0003DMT400038385	Potato	cytosol	38.78	37.75
TraesCS5D01G105800.1	Wheat	cytosol	37.41	37.67
PGSC0003DMT400090609	Potato	cytosol	38.1	37.09
PGSC0003DMT400088820	Potato	cytosol	38.1	37.09
VIT_15s0045g00490.t01	Wine grape	cytosol	38.1	37.09
TraesCS2D01G524400.1	Wheat	cytosol	40.82	37.04
TraesCS6D01G020500.1	Wheat	cytosol	38.78	36.54
GSMUA_Achr4P25740_001	Banana	cytosol	36.73	36.49
VIT_10s0003g05820.t01	Wine grape	cytosol	39.46	35.8
PGSC0003DMT400097239	Potato	cytosol	36.73	35.76
PGSC0003DMT400086770	Potato	cytosol	30.61	35.71
TraesCS5D01G176900.1	Wheat	cytosol	47.62	35.71
VIT_19s0085g00190.t01	Wine grape	cytosol	38.1	35.67
TraesCS6D01G002600.1	Wheat	cytosol	42.18	35.43
PGSC0003DMT400085217	Potato	cytosol	31.29	35.38
PGSC0003DMT400087694	Potato	cytosol	36.05	35.33
CDY03015	Canola	cytosol	36.05	35.1
PGSC0003DMT400085417	Potato	cytosol	29.93	34.92
PGSC0003DMT400088220	Potato	cytosol	35.37	34.44
PGSC0003DMT400093419	Potato	cytosol	35.37	34.44
PGSC0003DMT400090072	Potato	cytosol	23.81	34.31
PGSC0003DMT400088079	Potato	cytosol	26.53	33.91
TraesCS7D01G544900.1	Wheat	cytosol	32.65	33.57
Solyc11g008230.1.1	Tomato	cytosol	36.05	33.54
TraesCS7D01G545000.2	Wheat	cytosol	38.78	33.33
PGSC0003DMT400095953	Potato	cytosol	35.37	32.91
PGSC0003DMT400091657	Potato	cytosol	34.01	31.65
PGSC0003DMT400096238	Potato	cytosol	31.97	31.54
PGSC0003DMT400019185	Potato	cytosol	38.1	31.11
Solyc11g008240.1.1	Tomato	cytosol	33.33	31.01
Solyc11g008400.1.1	Tomato	cytosol	37.41	30.56
GSMUA_Achr4P25750_001	Banana	cytosol	36.73	30.51
TraesCS5D01G337200.1	Wheat	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, plastid, vacuole	51.02	30.36
PGSC0003DMT400093338	Potato	cytosol	34.01	29.76
Solyc03g093190.1.1	Tomato	cytosol	23.81	28.69
PGSC0003DMT400089461	Potato	cytosol	24.49	28.35
KRH13748	Soybean	cytosol	32.65	26.23
PGSC0003DMT400096074	Potato	cytosol	29.93	25.58
TraesCS1D01G138400.1	Wheat	cytosol	38.78	23.95
PGSC0003DMT400019237	Potato	cytosol	29.25	22.75
Solyc11g008420.1.1	Tomato	cytosol	28.57	22.22
TraesCS3D01G305500.1	Wheat	cytosol	35.37	10.18

Protein Annotations

MapMan:19.2.2.8.1.1	Gene3D:3.30.710.10	ncoils:Coil	GO:GO:0006511	GO:GO:0008150	GO:GO:0008152
GO:GO:0009056	GO:GO:0009987	GO:GO:0019538	PFAM:PF01466	PFAM:PF03931	PIRSF:PIRSF028729
PANTHER:PTHR11165	PANTHER:PTHR11165:SF71	InterPro:SKP1	InterPro:SKP1-like	InterPro:SKP1-like_dim_sf	InterPro:SKP1/BTB/POZ_sf
SMART:SM00512	SUPFAM:SSF54695	SUPFAM:SSF81382	InterPro:Skp1_comp_POZ	InterPro:Skp1_comp_dimer	EnsemblPlantsGene:TraesCS5D01G379900
EnsemblPlants:TraesCS5D01G379900.1	SEG:seg	:	:	:	:

Description

No Description!

Coordinates

chr5D:+:450637935..450638378

Molecular Weight (calculated)

16287.2 Da

IEP (calculated)

4.111

GRAVY (calculated)

-0.186

Length

147 amino acids

Sequence
(BLAST)

001: MVRLRSSDGQ ELEVMEEAIA AASKTIKDAL EKGGAAGDAI PVPDVTGRVL SRVLEYVNRH FSDPAAAADP FDYIPNFDDP LKAFDDAFVQ VDQDTLFDLI
101: DAAECLEIEG LMDLTCKTVA DQMRGKTIEE IRKKFHVVND YTAWAFE

Best Arabidopsis Sequence Match ( AT1G20140.1 )
(BLAST)

001: MAETKKMIIL KSSDGESFEI EEAVAVKSQT IKHMIEDDCA DNGIPLPNVT GAILAKVIEY CKKHVEAAAE AGGDKDFYGS AENDELKNWD SEFVKVDQPT
101: LFDLILAANY LNIGGLLDLT CKAVADQMRG KTPEQMRAHF NIKNDYTPEE EAEVRNENKW AFE

Arabidopsis Description

ASK4SK4 [Source:UniProtKB/TrEMBL;Acc:A0A178W187]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.