Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- golgi 1
- cytosol 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400088079 | Potato | cytosol | 68.21 | 89.57 |
| PGSC0003DMT400038385 | Potato | cytosol | 89.4 | 89.4 |
| PGSC0003DMT400093573 | Potato | cytosol | 88.08 | 88.08 |
| PGSC0003DMT400090609 | Potato | cytosol | 86.75 | 86.75 |
| PGSC0003DMT400088820 | Potato | cytosol | 85.43 | 85.43 |
| PGSC0003DMT400085217 | Potato | cytosol | 73.51 | 85.38 |
| PGSC0003DMT400087694 | Potato | cytosol | 84.77 | 85.33 |
| PGSC0003DMT400086770 | Potato | cytosol | 70.86 | 84.92 |
| PGSC0003DMT400088220 | Potato | cytosol | 82.78 | 82.78 |
| PGSC0003DMT400085417 | Potato | cytosol | 68.21 | 81.75 |
| PGSC0003DMT400097239 | Potato | cytosol | 81.46 | 81.46 |
| PGSC0003DMT400088621 | Potato | cytosol | 62.91 | 81.2 |
| Solyc03g093190.1.1 | Tomato | cytosol | 56.95 | 70.49 |
| PGSC0003DMT400096238 | Potato | cytosol | 62.91 | 63.76 |
| PGSC0003DMT400093338 | Potato | cytosol | 64.9 | 58.33 |
| PGSC0003DMT400068727 | Potato | cytosol | 54.97 | 55.33 |
| TraesCS4A01G366400.1 | Wheat | cytosol | 58.94 | 54.27 |
| PGSC0003DMT400024783 | Potato | cytosol | 53.64 | 54.0 |
| OQU87046 | Sorghum | cytosol | 47.68 | 53.73 |
| TraesCS2D01G560400.1 | Wheat | cytosol | 58.28 | 53.66 |
| TraesCS2D01G560500.1 | Wheat | cytosol | 58.28 | 53.66 |
| TraesCS3B01G566400.1 | Wheat | cytosol | 50.33 | 53.15 |
| TraesCS2D01G560700.1 | Wheat | cytosol | 57.62 | 53.05 |
| TraesCS2D01G560300.1 | Wheat | cytosol | 56.95 | 52.44 |
| TraesCS5A01G462800.1 | Wheat | cytosol | 46.36 | 52.24 |
| PGSC0003DMT400068726 | Potato | cytosol | 51.66 | 52.0 |
| PGSC0003DMT400015825 | Potato | cytosol | 53.64 | 51.92 |
| TraesCS5B01G474100.1 | Wheat | cytosol | 55.63 | 51.85 |
| TraesCS6B01G053400.1 | Wheat | cytosol | 47.02 | 51.82 |
| TraesCS6A01G000300.1 | Wheat | cytosol | 55.63 | 51.53 |
| TraesCS6B01G004300.1 | Wheat | cytosol | 55.63 | 51.53 |
| TraesCS6D01G045500.1 | Wheat | cytosol | 57.62 | 51.48 |
| TraesCS7D01G016900.1 | Wheat | cytosol | 57.62 | 51.48 |
| PGSC0003DMT400068720 | Potato | cytosol | 50.33 | 51.01 |
| TraesCS3B01G308600.1 | Wheat | cytosol | 54.97 | 50.92 |
| TraesCS5D01G475600.1 | Wheat | cytosol | 58.94 | 50.86 |
| TraesCS4A01G472600.1 | Wheat | cytosol | 57.62 | 50.58 |
| TraesCS7A01G020600.1 | Wheat | cytosol | 57.62 | 50.58 |
| TraesCS2B01G590600.1 | Wheat | cytosol | 58.28 | 50.57 |
| TraesCS2D01G420100.1 | Wheat | cytosol | 58.28 | 50.29 |
| TraesCS5D01G475400.1 | Wheat | golgi, plastid, unclear | 57.62 | 49.71 |
| TraesCS7D01G194900.1 | Wheat | cytosol | 57.62 | 49.71 |
| Os11t0456300-01 | Rice | plasma membrane | 56.95 | 49.71 |
| EES09697 | Sorghum | cytosol | 57.62 | 49.43 |
| Zm00001d049230_P001 | Maize | mitochondrion | 57.62 | 49.43 |
| TraesCS3D01G509600.1 | Wheat | cytosol | 56.29 | 49.42 |
| TraesCS6D01G001600.1 | Wheat | cytosol | 56.95 | 49.14 |
| TraesCS7B01G098900.1 | Wheat | cytosol | 56.95 | 49.14 |
| EES06093 | Sorghum | cytosol | 54.97 | 49.11 |
| TraesCS6D01G044400.1 | Wheat | cytosol | 43.71 | 48.89 |
| PGSC0003DMT400015827 | Potato | cytosol | 50.99 | 48.73 |
| TraesCS7A01G193600.1 | Wheat | cytosol | 43.05 | 47.79 |
| EES13900 | Sorghum | cytosol | 52.98 | 47.62 |
| TraesCS2B01G442100.1 | Wheat | mitochondrion | 54.97 | 46.63 |
| Os09t0539500-01 | Rice | cytosol, plasma membrane, plastid | 53.64 | 46.29 |
| HORVU5Hr1G110810.1 | Barley | cytosol | 47.02 | 46.1 |
| HORVU5Hr1G110840.1 | Barley | cytosol | 53.64 | 46.02 |
| HORVU5Hr1G110850.1 | Barley | cytosol | 53.64 | 45.51 |
| TraesCS2A01G522300.1 | Wheat | cytosol | 52.98 | 45.45 |
| TraesCS7A01G498800.1 | Wheat | cytosol | 49.67 | 45.45 |
| HORVU2Hr1G115410.2 | Barley | cytosol | 50.33 | 45.24 |
| HORVU5Hr1G110720.2 | Barley | cytosol | 52.98 | 44.94 |
| PGSC0003DMT400096074 | Potato | cytosol | 50.99 | 44.77 |
| HORVU2Hr1G115420.1 | Barley | cytosol | 51.66 | 44.07 |
| HORVU5Hr1G110760.2 | Barley | cytosol | 46.36 | 44.03 |
| EER99267 | Sorghum | cytosol | 50.33 | 43.93 |
| HORVU5Hr1G110800.1 | Barley | cytosol | 51.66 | 43.82 |
| HORVU5Hr1G110820.2 | Barley | cytosol | 51.66 | 43.82 |
| HORVU5Hr1G110830.3 | Barley | cytosol | 51.66 | 43.58 |
| HORVU2Hr1G115400.1 | Barley | cytosol | 50.99 | 43.5 |
| HORVU5Hr1G090360.1 | Barley | cytosol | 50.99 | 43.26 |
| PGSC0003DMT400090072 | Potato | cytosol | 29.14 | 43.14 |
| HORVU2Hr1G115380.1 | Barley | cytosol | 50.99 | 42.78 |
| HORVU3Hr1G089860.3 | Barley | cytosol | 50.33 | 42.22 |
| HORVU5Hr1G110790.1 | Barley | cytosol | 28.48 | 41.75 |
| HORVU7Hr1G103140.2 | Barley | cytosol | 49.67 | 41.67 |
| HORVU7Hr1G099950.1 | Barley | cytosol | 47.68 | 41.62 |
| HORVU7Hr1G099860.2 | Barley | cytosol, mitochondrion, nucleus | 47.68 | 41.14 |
| CDY03015 | Canola | cytosol | 41.06 | 41.06 |
| Os09t0273800-01 | Rice | cytosol | 45.03 | 40.72 |
| HORVU7Hr1G099840.1 | Barley | cytosol | 47.02 | 40.57 |
| TraesCS6D01G002600.1 | Wheat | cytosol | 47.02 | 40.57 |
| HORVU7Hr1G002220.1 | Barley | cytosol, plastid | 56.29 | 40.48 |
| TraesCS2D01G524400.1 | Wheat | cytosol | 43.05 | 40.12 |
| TraesCS5B01G165700.1 | Wheat | cytosol | 46.36 | 40.0 |
| TraesCS4B01G337400.1 | Wheat | cytosol | 41.72 | 39.87 |
| VIT_15s0045g00490.t01 | Wine grape | cytosol | 39.74 | 39.74 |
| TraesCS5D01G105800.1 | Wheat | cytosol | 38.41 | 39.73 |
| Os08t0375500-00 | Rice | cytosol | 44.37 | 39.65 |
| TraesCS5D01G173200.1 | Wheat | cytosol | 47.02 | 39.44 |
| TraesCS3B01G406500.1 | Wheat | cytosol | 42.38 | 39.26 |
| PGSC0003DMT400095953 | Potato | cytosol | 41.06 | 39.24 |
| GSMUA_Achr4P25740_001 | Banana | cytosol | 38.41 | 39.19 |
| TraesCS7D01G544900.1 | Wheat | cytosol | 37.09 | 39.16 |
| Os08t0375700-00 | Rice | cytosol | 43.71 | 39.05 |
| TraesCS5A01G168900.1 | Wheat | cytosol | 47.02 | 39.01 |
| TraesCS5B01G099600.1 | Wheat | cytosol | 45.03 | 38.86 |
| Os09t0412050-00 | Rice | cytosol | 43.05 | 38.69 |
| TraesCS3A01G374400.1 | Wheat | cytosol | 41.72 | 38.65 |
| TraesCS7B01G492200.1 | Wheat | cytosol | 45.03 | 38.64 |
| TraesCS7B01G492300.1 | Wheat | cytosol | 45.03 | 38.64 |
| TraesCS7B01G492500.1 | Wheat | cytosol | 45.03 | 38.64 |
| Os09t0274800-00 | Rice | cytosol | 43.71 | 38.37 |
| PGSC0003DMT400019185 | Potato | cytosol | 45.7 | 38.33 |
| Zm00001d007590_P001 | Maize | cytosol | 47.68 | 38.3 |
| TraesCS5A01G093500.1 | Wheat | cytosol | 41.72 | 38.18 |
| VIT_19s0085g00180.t01 | Wine grape | cytosol | 38.41 | 38.16 |
| PGSC0003DMT400094745 | Potato | cytosol | 26.49 | 38.1 |
| TraesCS7A01G565800.1 | Wheat | cytosol | 44.37 | 38.07 |
| TraesCS7D01G545000.2 | Wheat | cytosol | 43.05 | 38.01 |
| VIT_10s0003g05820.t01 | Wine grape | cytosol | 40.4 | 37.65 |
| TraesCS6A01G016900.1 | Wheat | cytosol | 44.37 | 37.64 |
| Zm00001d007659_P001 | Maize | cytosol | 47.68 | 37.5 |
| Zm00001d007589_P001 | Maize | cytosol | 47.68 | 37.11 |
| TraesCS7B01G492400.1 | Wheat | cytosol | 43.05 | 36.93 |
| TraesCS6B01G024700.1 | Wheat | cytosol | 41.06 | 36.9 |
| Zm00001d007586_P001 | Maize | cytosol | 46.36 | 36.46 |
| TraesCS5B01G372700.1 | Wheat | cytosol | 39.07 | 36.42 |
| Zm00001d022618_P001 | Maize | cytosol | 41.06 | 36.26 |
| Os06t0113800-00 | Rice | cytosol | 39.74 | 36.14 |
| PGSC0003DMT400091657 | Potato | cytosol | 37.75 | 36.08 |
| TraesCS6B01G008800.1 | Wheat | cytosol | 41.72 | 36.0 |
| TraesCS2A01G574500.1 | Wheat | cytosol | 39.74 | 35.71 |
| TraesCS5D01G176900.1 | Wheat | cytosol | 46.36 | 35.71 |
| TraesCS5D01G379900.1 | Wheat | cytosol | 34.44 | 35.37 |
| VIT_19s0085g00190.t01 | Wine grape | cytosol | 36.42 | 35.03 |
| TraesCS5A01G172300.1 | Wheat | cytosol | 45.7 | 35.03 |
| TraesCS5B01G169700.1 | Wheat | cytosol | 46.36 | 35.0 |
| PGSC0003DMT400089461 | Potato | cytosol | 29.14 | 34.65 |
| TraesCS7A01G565700.1 | Wheat | cytosol | 39.07 | 34.5 |
| TraesCS1D01G201900.1 | Wheat | cytosol | 37.75 | 34.34 |
| TraesCS3B01G092200.1 | Wheat | cytosol | 37.75 | 34.34 |
| Os07t0625600-00 | Rice | cytosol | 40.4 | 34.27 |
| TraesCS3D01G077800.1 | Wheat | cytosol | 37.75 | 33.93 |
| HORVU5Hr1G092210.1 | Barley | cytosol | 35.76 | 33.54 |
| OQU76826 | Sorghum | cytosol | 38.41 | 33.53 |
| GSMUA_Achr4P25750_001 | Banana | cytosol | 39.07 | 33.33 |
| TraesCS4A01G379700.1 | Wheat | cytosol | 32.45 | 32.89 |
| Os07t0625500-01 | Rice | cytosol | 37.75 | 32.76 |
| TraesCS6A01G017300.1 | Wheat | cytosol | 33.77 | 32.69 |
| TraesCS6D01G020500.1 | Wheat | cytosol | 33.77 | 32.69 |
| Os09t0275200-01 | Rice | cytosol | 34.44 | 32.5 |
| PGSC0003DMT400019237 | Potato | cytosol | 39.74 | 31.75 |
| KRH13748 | Soybean | cytosol | 37.09 | 30.6 |
| HORVU7Hr1G099790.1 | Barley | cytosol, plastid | 39.74 | 30.46 |
| Os07t0624900-00 | Rice | cytosol | 39.74 | 30.0 |
| Zm00001d042677_P001 | Maize | plastid | 49.67 | 28.41 |
| Os02t0101600-00 | Rice | cytosol | 29.14 | 27.33 |
| Os10t0438100-00 | Rice | cytosol | 38.41 | 26.36 |
| TraesCS1B01G156000.1 | Wheat | cytosol | 39.07 | 25.0 |
| EER94185 | Sorghum | cytosol | 34.44 | 24.64 |
| TraesCS1A01G129800.1 | Wheat | cytosol | 38.41 | 24.58 |
| TraesCS1D01G138400.1 | Wheat | cytosol | 38.41 | 24.37 |
| HORVU1Hr1G035930.1 | Barley | cytosol | 37.75 | 23.55 |
| OQU90298 | Sorghum | cytosol | 41.72 | 18.05 |
| HORVU3Hr1G074970.1 | Barley | cytosol, nucleus | 29.8 | 17.86 |
| TraesCS3B01G340200.1 | Wheat | cytosol | 37.75 | 13.67 |
| TraesCS3D01G305500.1 | Wheat | cytosol | 40.4 | 11.94 |
| TraesCS3A01G297000.1 | Wheat | cytosol | 41.72 | 11.89 |
| TraesCS3B01G340100.1 | Wheat | nucleus | 37.09 | 10.77 |
Protein Annotations
| EntrezGene:102588424 | MapMan:19.2.2.8.1.1 | Gene3D:3.30.710.10 | GO:GO:0006511 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009056 | GO:GO:0009987 | GO:GO:0019538 | UniProt:M1DRX5 | PFAM:PF01466 | PFAM:PF03931 |
| EnsemblPlantsGene:PGSC0003DMG400042990 | PGSC:PGSC0003DMG400042990 | EnsemblPlants:PGSC0003DMT400093419 | PIRSF:PIRSF028729 | PANTHER:PTHR11165 | PANTHER:PTHR11165:SF89 |
| InterPro:SKP1 | InterPro:SKP1-like | InterPro:SKP1-like_dim_sf | InterPro:SKP1/BTB/POZ_sf | SMART:SM00512 | SUPFAM:SSF54695 |
| SUPFAM:SSF81382 | InterPro:Skp1_comp_POZ | InterPro:Skp1_comp_dimer | UniParc:UPI000294CEC5 | RefSeq:XP_006361573.1 | : |
Description
SKP1 1 [Source:PGSC_GENE;Acc:PGSC0003DMG400042990]
Coordinates
chr11:+:25424280..25424735
Molecular Weight (calculated)
17428.9 Da
IEP (calculated)
4.568
GRAVY (calculated)
-0.354
Length
151 amino acids
Sequence
(BLAST)
(BLAST)
001: MSSSKKFLTL KTCDGMEFVL DEAIDVRSQT IKNMVENDCV SNVIPLPNVD SKTMTKVIEY WKKHSEEDVS KDMLIEFNKA FVKVHHSILH ALILAGNFLN
101: DKEILDIICQ EVADSIKGKT PEEIRKEIDI KNDFTLEEEE EIRKENVWAL E
101: DKEILDIICQ EVADSIKGKT PEEIRKEIDI KNDFTLEEEE EIRKENVWAL E
001: MSSKMIVLMS SDGQSFEVEE AVAIQSQTIA HMVEDDCVAD GIPLANVESK ILVKVIEYCK KHHVDEANPI SEEDLNNWDE KFMDLEQSTI FELILAANYL
101: NIKSLLDLTC QTVADMIKGK TPEEIRSTFN IENDFTPEEE EAVRKENQWA FE
101: NIKSLLDLTC QTVADMIKGK TPEEIRSTFN IENDFTPEEE EAVRKENQWA FE
Arabidopsis Description
ASK11SKP1-like protein 11 [Source:UniProtKB/Swiss-Prot;Acc:O49484]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.