Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 2
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS6B01G004300.1 | Wheat | cytosol | 99.39 | 99.39 |
| TraesCS6D01G001600.1 | Wheat | cytosol | 98.77 | 92.0 |
| TraesCS4A01G472600.1 | Wheat | cytosol | 93.86 | 88.95 |
| TraesCS7A01G020600.1 | Wheat | cytosol | 93.86 | 88.95 |
| TraesCS4A01G366400.1 | Wheat | cytosol | 84.66 | 84.15 |
| TraesCS5A01G462800.1 | Wheat | cytosol | 66.26 | 80.6 |
| TraesCS2A01G522300.1 | Wheat | cytosol | 82.21 | 76.14 |
| TraesCS5A01G331300.1 | Wheat | cytosol | 74.85 | 73.49 |
| TraesCS7A01G193600.1 | Wheat | cytosol | 60.12 | 72.06 |
| TraesCS5A01G093500.1 | Wheat | cytosol | 70.55 | 69.7 |
| TraesCS7A01G565800.1 | Wheat | cytosol | 73.62 | 68.18 |
| TraesCS6A01G016900.1 | Wheat | cytosol | 70.55 | 64.61 |
| TraesCS7A01G498800.1 | Wheat | cytosol | 65.03 | 64.24 |
| TraesCS7A01G565700.1 | Wheat | cytosol | 66.26 | 63.16 |
| TraesCS3A01G374400.1 | Wheat | cytosol | 62.58 | 62.58 |
| TraesCS4A01G379700.1 | Wheat | cytosol | 57.06 | 62.42 |
| PGSC0003DMT400088621 | Potato | cytosol | 44.17 | 61.54 |
| CDY03015 | Canola | cytosol | 55.83 | 60.26 |
| Solyc03g112710.1.1 | Tomato | cytosol | 55.83 | 60.26 |
| TraesCS6A01G017300.1 | Wheat | cytosol | 57.06 | 59.62 |
| PGSC0003DMT400090609 | Potato | cytosol | 55.21 | 59.6 |
| PGSC0003DMT400093573 | Potato | cytosol | 55.21 | 59.6 |
| PGSC0003DMT400038385 | Potato | cytosol | 55.21 | 59.6 |
| PGSC0003DMT400088820 | Potato | cytosol | 53.99 | 58.28 |
| TraesCS5A01G168900.1 | Wheat | cytosol | 65.03 | 58.24 |
| PGSC0003DMT400088220 | Potato | cytosol | 52.76 | 56.95 |
| PGSC0003DMT400093419 | Potato | cytosol | 51.53 | 55.63 |
| PGSC0003DMT400087694 | Potato | cytosol | 50.92 | 55.33 |
| PGSC0003DMT400097239 | Potato | cytosol | 50.92 | 54.97 |
| VIT_19s0085g00180.t01 | Wine grape | cytosol | 50.31 | 53.95 |
| PGSC0003DMT400085217 | Potato | cytosol | 42.94 | 53.85 |
| PGSC0003DMT400088079 | Potato | cytosol | 36.2 | 51.3 |
| PGSC0003DMT400086770 | Potato | cytosol | 39.26 | 50.79 |
| TraesCS5A01G172300.1 | Wheat | cytosol | 60.74 | 50.25 |
| PGSC0003DMT400096238 | Potato | cytosol | 45.4 | 49.66 |
| GSMUA_Achr4P25740_001 | Banana | cytosol | 44.79 | 49.32 |
| PGSC0003DMT400085417 | Potato | cytosol | 38.04 | 49.21 |
| Solyc11g008230.1.1 | Tomato | cytosol | 47.24 | 48.73 |
| Os02t0101600-00 | Rice | cytosol | 47.85 | 48.45 |
| VIT_10s0003g05820.t01 | Wine grape | cytosol | 47.85 | 48.15 |
| TraesCS2A01G574500.1 | Wheat | cytosol | 49.08 | 47.62 |
| PGSC0003DMT400090072 | Potato | cytosol | 29.45 | 47.06 |
| VIT_15s0045g00490.t01 | Wine grape | cytosol | 43.56 | 47.02 |
| PGSC0003DMT400095953 | Potato | cytosol | 45.4 | 46.84 |
| PGSC0003DMT400093338 | Potato | cytosol | 47.24 | 45.83 |
| PGSC0003DMT400091657 | Potato | cytosol | 44.17 | 45.57 |
| VIT_19s0085g00190.t01 | Wine grape | cytosol | 43.56 | 45.22 |
| Solyc03g093190.1.1 | Tomato | cytosol | 33.74 | 45.08 |
| PGSC0003DMT400019185 | Potato | cytosol | 48.47 | 43.89 |
| Solyc11g008400.1.1 | Tomato | cytosol | 47.85 | 43.33 |
| PGSC0003DMT400089461 | Potato | cytosol | 33.13 | 42.52 |
| GSMUA_Achr4P25750_001 | Banana | cytosol | 44.79 | 41.24 |
| Solyc11g008240.1.1 | Tomato | cytosol | 39.26 | 40.51 |
| KRH13748 | Soybean | cytosol | 42.94 | 38.25 |
| PGSC0003DMT400096074 | Potato | cytosol | 39.26 | 37.21 |
| PGSC0003DMT400019237 | Potato | cytosol | 39.26 | 33.86 |
| TraesCS1A01G129800.1 | Wheat | cytosol | 47.85 | 33.05 |
| Solyc11g008420.1.1 | Tomato | cytosol | 37.42 | 32.28 |
| TraesCS3A01G297000.1 | Wheat | cytosol | 47.85 | 14.72 |
Protein Annotations
| MapMan:19.2.2.8.1.1 | Gene3D:3.30.710.10 | GO:GO:0006511 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009056 |
| GO:GO:0009987 | GO:GO:0019538 | PFAM:PF01466 | PFAM:PF03931 | PIRSF:PIRSF028729 | PANTHER:PTHR11165 |
| PANTHER:PTHR11165:SF89 | InterPro:SKP1 | InterPro:SKP1-like | InterPro:SKP1-like_dim_sf | InterPro:SKP1/BTB/POZ_sf | SMART:SM00512 |
| SUPFAM:SSF54695 | SUPFAM:SSF81382 | InterPro:Skp1_comp_POZ | InterPro:Skp1_comp_dimer | EnsemblPlantsGene:TraesCS6A01G000300 | EnsemblPlants:TraesCS6A01G000300.1 |
| SEG:seg | : | : | : | : | : |
Description
No Description!
Coordinates
chr6A:+:286367..287605
Molecular Weight (calculated)
17987.1 Da
IEP (calculated)
4.141
GRAVY (calculated)
-0.377
Length
163 amino acids
Sequence
(BLAST)
(BLAST)
001: MITLKSSDGE EFEVEEAVAM ESQTIRHMIE DDCADNGIPL PNVNSKILSK VIEYCNKHVQ AKPADGAAAA AGASDAAAPA APAEDLKNWD AEFVKVDQAT
101: LFDLILAANY LNIKGLLDLT CQTVADMIKG KTPEEIRKTF NIKNDFTPEE EEEIRRENQW AFE
101: LFDLILAANY LNIKGLLDLT CQTVADMIKG KTPEEIRKTF NIKNDFTPEE EEEIRRENQW AFE
001: MAETKKMIIL KSSDGESFEI EEAVAVKSQT IKHMIEDDCA DNGIPLPNVT GAILAKVIEY CKKHVEAAAE AGGDKDFYGS AENDELKNWD SEFVKVDQPT
101: LFDLILAANY LNIGGLLDLT CKAVADQMRG KTPEQMRAHF NIKNDYTPEE EAEVRNENKW AFE
101: LFDLILAANY LNIGGLLDLT CKAVADQMRG KTPEQMRAHF NIKNDYTPEE EAEVRNENKW AFE
Arabidopsis Description
ASK4SK4 [Source:UniProtKB/TrEMBL;Acc:A0A178W187]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.