Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 3
- plastid 2
Predictors | GFP | MS/MS | Papers | ||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
TraesCS5D01G176900.1 | Wheat | cytosol | 89.85 | 90.31 |
TraesCS5B01G169700.1 | Wheat | cytosol | 90.86 | 89.5 |
HORVU5Hr1G110790.1 | Barley | cytosol | 34.52 | 66.02 |
TraesCS5A01G168900.1 | Wheat | cytosol | 60.91 | 65.93 |
TraesCS7A01G498800.1 | Wheat | cytosol | 53.3 | 63.64 |
TraesCS4A01G366400.1 | Wheat | cytosol | 52.28 | 62.8 |
TraesCS7A01G020600.1 | Wheat | cytosol | 53.81 | 61.63 |
HORVU5Hr1G110840.1 | Barley | cytosol | 54.82 | 61.36 |
TraesCS4A01G472600.1 | Wheat | cytosol | 53.3 | 61.05 |
TraesCS6A01G000300.1 | Wheat | cytosol | 50.25 | 60.74 |
HORVU5Hr1G110820.2 | Barley | cytosol | 54.82 | 60.67 |
HORVU5Hr1G110800.1 | Barley | cytosol | 54.82 | 60.67 |
HORVU5Hr1G110830.3 | Barley | cytosol | 54.31 | 59.78 |
HORVU5Hr1G110810.1 | Barley | cytosol | 46.19 | 59.09 |
HORVU5Hr1G090360.1 | Barley | cytosol | 53.3 | 58.99 |
TraesCS5A01G331300.1 | Wheat | cytosol | 48.73 | 57.83 |
HORVU5Hr1G110760.2 | Barley | cytosol | 46.19 | 57.23 |
TraesCS5A01G462800.1 | Wheat | cytosol | 38.58 | 56.72 |
TraesCS2A01G522300.1 | Wheat | cytosol | 48.73 | 54.55 |
TraesCS7A01G193600.1 | Wheat | cytosol | 37.56 | 54.41 |
CDY03015 | Canola | cytosol | 40.1 | 52.32 |
PGSC0003DMT400088621 | Potato | cytosol | 29.95 | 50.43 |
PGSC0003DMT400088820 | Potato | cytosol | 37.56 | 49.01 |
PGSC0003DMT400097239 | Potato | cytosol | 37.56 | 49.01 |
PGSC0003DMT400090609 | Potato | cytosol | 37.06 | 48.34 |
PGSC0003DMT400038385 | Potato | cytosol | 37.06 | 48.34 |
TraesCS7A01G565800.1 | Wheat | cytosol | 43.15 | 48.3 |
VIT_19s0085g00180.t01 | Wine grape | cytosol | 37.06 | 48.03 |
PGSC0003DMT400093573 | Potato | cytosol | 36.55 | 47.68 |
Solyc03g112710.1.1 | Tomato | cytosol | 36.55 | 47.68 |
PGSC0003DMT400087694 | Potato | cytosol | 36.04 | 47.33 |
TraesCS5A01G093500.1 | Wheat | cytosol | 39.59 | 47.27 |
TraesCS7A01G565700.1 | Wheat | cytosol | 40.61 | 46.78 |
PGSC0003DMT400088220 | Potato | cytosol | 35.53 | 46.36 |
PGSC0003DMT400093419 | Potato | cytosol | 35.03 | 45.7 |
TraesCS6A01G016900.1 | Wheat | cytosol | 41.12 | 45.51 |
PGSC0003DMT400085217 | Potato | cytosol | 29.95 | 45.38 |
TraesCS6A01G017300.1 | Wheat | cytosol | 35.53 | 44.87 |
PGSC0003DMT400088079 | Potato | cytosol | 25.89 | 44.35 |
Solyc11g008230.1.1 | Tomato | cytosol | 35.03 | 43.67 |
TraesCS3A01G374400.1 | Wheat | cytosol | 36.04 | 43.56 |
Solyc11g008400.1.1 | Tomato | cytosol | 39.59 | 43.33 |
VIT_15s0045g00490.t01 | Wine grape | cytosol | 32.99 | 43.05 |
TraesCS4A01G379700.1 | Wheat | cytosol | 32.49 | 42.95 |
PGSC0003DMT400019185 | Potato | cytosol | 39.09 | 42.78 |
PGSC0003DMT400086770 | Potato | cytosol | 26.9 | 42.06 |
PGSC0003DMT400085417 | Potato | cytosol | 26.9 | 42.06 |
PGSC0003DMT400095953 | Potato | cytosol | 33.5 | 41.77 |
PGSC0003DMT400091657 | Potato | cytosol | 33.5 | 41.77 |
PGSC0003DMT400090072 | Potato | cytosol | 21.32 | 41.18 |
PGSC0003DMT400096238 | Potato | cytosol | 30.96 | 40.94 |
GSMUA_Achr4P25740_001 | Banana | cytosol | 30.46 | 40.54 |
PGSC0003DMT400093338 | Potato | cytosol | 34.52 | 40.48 |
PGSC0003DMT400089461 | Potato | cytosol | 25.89 | 40.16 |
VIT_19s0085g00190.t01 | Wine grape | cytosol | 31.98 | 40.13 |
TraesCS2A01G574500.1 | Wheat | cytosol | 34.01 | 39.88 |
VIT_10s0003g05820.t01 | Wine grape | cytosol | 31.98 | 38.89 |
Solyc11g008240.1.1 | Tomato | cytosol | 30.96 | 38.61 |
GSMUA_Achr4P25750_001 | Banana | cytosol | 34.52 | 38.42 |
Solyc03g093190.1.1 | Tomato | cytosol | 22.84 | 36.89 |
KRH13748 | Soybean | cytosol | 34.01 | 36.61 |
PGSC0003DMT400096074 | Potato | cytosol | 26.9 | 30.81 |
PGSC0003DMT400019237 | Potato | cytosol | 29.44 | 30.69 |
TraesCS1A01G129800.1 | Wheat | cytosol | 36.55 | 30.51 |
Solyc11g008420.1.1 | Tomato | cytosol | 28.43 | 29.63 |
TraesCS3A01G297000.1 | Wheat | cytosol | 43.15 | 16.04 |
Protein Annotations
MapMan:19.2.2.8.1.1 | Gene3D:3.30.710.10 | GO:GO:0006511 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009056 |
GO:GO:0009987 | GO:GO:0019538 | PFAM:PF01466 | PFAM:PF03931 | PIRSF:PIRSF028729 | PANTHER:PTHR11165 |
PANTHER:PTHR11165:SF89 | InterPro:SKP1 | InterPro:SKP1-like | InterPro:SKP1-like_dim_sf | InterPro:SKP1/BTB/POZ_sf | SMART:SM00512 |
SUPFAM:SSF54695 | SUPFAM:SSF81382 | InterPro:Skp1_comp_POZ | InterPro:Skp1_comp_dimer | EnsemblPlantsGene:TraesCS5A01G172300 | EnsemblPlants:TraesCS5A01G172300.1 |
SEG:seg | : | : | : | : | : |
Description
No Description!
Coordinates
chr5A:+:365604549..365610428
Molecular Weight (calculated)
21369.7 Da
IEP (calculated)
4.048
GRAVY (calculated)
-0.367
Length
197 amino acids
Sequence
(BLAST)
(BLAST)
001: MAATAADASS SSSISEAVVG EKSNKMITLI SCDGESFEVT EEAAKMSVTI KHMIEDGCVD DGIPLPNVRA KILSMVIEYC SKHAANDDDT NKHVTDPADT
101: DEDGDNNNNN ASAGEKENLK SFDASLVAID QATVFDLILA ANFLSIKGLL DLACQKVADD IKDKSVEEVR EIFKIENDFT KEEEEAVRKD NAWAFNE
101: DEDGDNNNNN ASAGEKENLK SFDASLVAID QATVFDLILA ANFLSIKGLL DLACQKVADD IKDKSVEEVR EIFKIENDFT KEEEEAVRKD NAWAFNE
001: MAETKKMIIL KSSDGESFEI EEAVAVKSQT IKHMIEDDCA DNGIPLPNVT GAILAKVIEY CKKHVEAAAE AGGDKDFYGS AENDELKNWD SEFVKVDQPT
101: LFDLILAANY LNIGGLLDLT CKAVADQMRG KTPEQMRAHF NIKNDYTPEE EAEVRNENKW AFE
101: LFDLILAANY LNIGGLLDLT CKAVADQMRG KTPEQMRAHF NIKNDYTPEE EAEVRNENKW AFE
Arabidopsis Description
ASK4SK4 [Source:UniProtKB/TrEMBL;Acc:A0A178W187]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.