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Barley
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Barley
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • cytosol 2
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol
MultiLoc:cytosol
YLoc:cytosol
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
HORVU5Hr1G110790.1 Barley cytosol 53.98 92.23
HORVU5Hr1G110820.2 Barley cytosol 91.48 90.45
HORVU5Hr1G110800.1 Barley cytosol 91.48 90.45
HORVU5Hr1G110830.3 Barley cytosol 90.91 89.39
HORVU5Hr1G110760.2 Barley cytosol 80.11 88.68
HORVU5Hr1G090360.1 Barley cytosol 88.07 87.08
HORVU5Hr1G110810.1 Barley cytosol 76.14 87.01
HORVU5Hr1G110720.2 Barley cytosol 79.55 78.65
HORVU5Hr1G110850.1 Barley cytosol 78.41 77.53
HORVU3Hr1G089860.3 Barley cytosol 76.7 75.0
HORVU2Hr1G115380.1 Barley cytosol 76.14 74.44
HORVU2Hr1G115400.1 Barley cytosol 74.43 74.01
HORVU2Hr1G115410.2 Barley cytosol 70.45 73.81
HORVU2Hr1G115420.1 Barley cytosol 73.86 73.45
HORVU7Hr1G103140.2 Barley cytosol 74.43 72.78
TraesCS7A01G498800.1 Wheat cytosol 64.2 68.48
TraesCS5B01G165700.1 Wheat cytosol 65.34 65.71
TraesCS5D01G173200.1 Wheat cytosol 64.77 63.33
TraesCS5A01G168900.1 Wheat cytosol 65.34 63.19
HORVU7Hr1G099950.1 Barley cytosol 61.93 63.01
HORVU7Hr1G099860.2 Barley cytosol, mitochondrion, nucleus 62.5 62.86
HORVU7Hr1G099840.1 Barley cytosol 61.36 61.71
HORVU7Hr1G002220.1 Barley cytosol, plastid 72.16 60.48
Solyc03g112710.1.1 Tomato cytosol 50.57 58.94
PGSC0003DMT400088621 Potato cytosol 38.64 58.12
TraesCS5D01G176900.1 Wheat cytosol 63.64 57.14
PGSC0003DMT400038385 Potato cytosol 48.86 56.95
PGSC0003DMT400093573 Potato cytosol 48.86 56.95
PGSC0003DMT400090609 Potato cytosol 48.86 56.95
CDY03015 Canola cytosol 48.3 56.29
TraesCS5B01G169700.1 Wheat cytosol 63.64 56.0
PGSC0003DMT400088820 Potato cytosol 47.73 55.63
TraesCS5A01G172300.1 Wheat cytosol 61.36 54.82
PGSC0003DMT400088220 Potato cytosol 46.59 54.3
PGSC0003DMT400097239 Potato cytosol 46.02 53.64
PGSC0003DMT400093419 Potato cytosol 46.02 53.64
PGSC0003DMT400087694 Potato cytosol 45.45 53.33
PGSC0003DMT400085217 Potato cytosol 39.2 53.08
PGSC0003DMT400090072 Potato cytosol 29.55 50.98
GSMUA_Achr4P25740_001 Banana cytosol 42.61 50.68
Solyc11g008230.1.1 Tomato cytosol 45.45 50.63
PGSC0003DMT400088079 Potato cytosol 32.95 50.43
VIT_19s0085g00180.t01 Wine grape cytosol 43.18 50.0
PGSC0003DMT400086770 Potato cytosol 35.8 50.0
PGSC0003DMT400096238 Potato cytosol 42.05 49.66
PGSC0003DMT400085417 Potato cytosol 34.66 48.41
VIT_10s0003g05820.t01 Wine grape cytosol 43.75 47.53
VIT_15s0045g00490.t01 Wine grape cytosol 40.34 47.02
PGSC0003DMT400091657 Potato cytosol 42.05 46.84
HORVU7Hr1G099790.1 Barley cytosol, plastid 52.27 46.7
PGSC0003DMT400093338 Potato cytosol 43.75 45.83
PGSC0003DMT400095953 Potato cytosol 40.91 45.57
Solyc11g008240.1.1 Tomato cytosol 39.77 44.3
HORVU5Hr1G084140.4 Barley cytosol 60.8 44.21
HORVU5Hr1G092210.1 Barley cytosol 40.34 44.1
PGSC0003DMT400019185 Potato cytosol 44.89 43.89
Solyc11g008400.1.1 Tomato cytosol 44.32 43.33
VIT_19s0085g00190.t01 Wine grape cytosol 38.64 43.31
GSMUA_Achr4P25750_001 Banana cytosol 43.18 42.94
Solyc03g093190.1.1 Tomato cytosol 29.55 42.62
PGSC0003DMT400089461 Potato cytosol 30.11 41.73
KRH13748 Soybean cytosol 40.91 39.34
PGSC0003DMT400096074 Potato cytosol 35.8 36.63
PGSC0003DMT400019237 Potato cytosol 36.36 33.86
Solyc11g008420.1.1 Tomato cytosol 35.23 32.8
HORVU1Hr1G035930.1 Barley cytosol 44.32 32.23
HORVU3Hr1G074970.1 Barley cytosol, nucleus 34.66 24.21
Protein Annotations
MapMan:19.2.2.8.1.1Gene3D:3.30.710.10UniProt:A0A287SQ01GO:GO:0006511GO:GO:0008150GO:GO:0008152
GO:GO:0009056GO:GO:0009987GO:GO:0019538EnsemblPlantsGene:HORVU5Hr1G110840EnsemblPlants:HORVU5Hr1G110840.1PFAM:PF01466
PFAM:PF03931PIRSF:PIRSF028729PANTHER:PTHR11165PANTHER:PTHR11165:SF89InterPro:SKP1InterPro:SKP1-like
InterPro:SKP1-like_dim_sfInterPro:SKP1/BTB/POZ_sfSMART:SM00512SUPFAM:SSF54695SUPFAM:SSF81382InterPro:Skp1_comp_POZ
InterPro:Skp1_comp_dimerUniParc:UPI000B462195SEG:seg:::
Description
No Description!
Coordinates
chrchr5H:+:634257801..634258331
Molecular Weight (calculated)
19330.8 Da
IEP (calculated)
4.288
GRAVY (calculated)
-0.401
Length
176 amino acids
Sequence
(BLAST)
001: SMAAEEGEKK MITLKSLDGE EFEIEEAAAM GSQTIRHMIE DGCADNGIPL PNVNAKILSK VIEYCKKHCQ ANPKPANSGA GSSSASAAHE EPAAPTEDLK
101: SFDAEFVKVD QNTLFDLILA ANYLDIKGML DLTCQTVAEM IKGKTVEEIR KCFNIVNDFT PEEEAEIRKE NQWAFD
Best Arabidopsis Sequence Match ( AT1G20140.1 )
(BLAST)
001: MAETKKMIIL KSSDGESFEI EEAVAVKSQT IKHMIEDDCA DNGIPLPNVT GAILAKVIEY CKKHVEAAAE AGGDKDFYGS AENDELKNWD SEFVKVDQPT
101: LFDLILAANY LNIGGLLDLT CKAVADQMRG KTPEQMRAHF NIKNDYTPEE EAEVRNENKW AFE
Arabidopsis Description
ASK4SK4 [Source:UniProtKB/TrEMBL;Acc:A0A178W187]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.