Factsheet for Os02t0101600-00

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
golgi 1
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, golgi, mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	golgi
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os11t0456300-01	Rice	plasma membrane	53.42	49.71
TraesCS6D01G001600.1	Wheat	cytosol	52.8	48.57
TraesCS6B01G004300.1	Wheat	cytosol	48.45	47.85
TraesCS6A01G000300.1	Wheat	cytosol	48.45	47.85
TraesCS6D01G020500.1	Wheat	cytosol	45.34	46.79
TraesCS6A01G017300.1	Wheat	cytosol	44.72	46.15
TraesCS5B01G099600.1	Wheat	cytosol	49.69	45.71
TraesCS4A01G379700.1	Wheat	cytosol	40.37	43.62
HORVU7Hr1G099840.1	Barley	cytosol	47.2	43.43
HORVU7Hr1G099950.1	Barley	cytosol	46.58	43.35
TraesCS7B01G492200.1	Wheat	cytosol	47.2	43.18
TraesCS5A01G093500.1	Wheat	cytosol	44.1	43.03
TraesCS7A01G565700.1	Wheat	cytosol	45.34	42.69
TraesCS7B01G492500.1	Wheat	cytosol	46.58	42.61
TraesCS7B01G492300.1	Wheat	cytosol	46.58	42.61
HORVU7Hr1G099860.2	Barley	cytosol, mitochondrion, nucleus	45.96	42.29
TraesCS7D01G545000.2	Wheat	cytosol	44.72	42.11
TraesCS7A01G565800.1	Wheat	cytosol	45.96	42.05
Os09t0539500-01	Rice	cytosol, plasma membrane, plastid	45.34	41.71
TraesCS7B01G492400.1	Wheat	cytosol	45.34	41.48
TraesCS6B01G008800.1	Wheat	cytosol	44.1	40.57
TraesCS6A01G016900.1	Wheat	cytosol	44.1	39.89
TraesCS6B01G024700.1	Wheat	cytosol	41.61	39.88
TraesCS6D01G002600.1	Wheat	cytosol	42.24	38.86
TraesCS7D01G544900.1	Wheat	cytosol	34.16	38.46
TraesCS5D01G105800.1	Wheat	cytosol	34.78	38.36
HORVU7Hr1G099790.1	Barley	cytosol, plastid	46.58	38.07
PGSC0003DMT400088079	Potato	cytosol	26.09	36.52
PGSC0003DMT400090072	Potato	cytosol	22.98	36.27
Os08t0375500-00	Rice	cytosol	35.4	33.73
Os09t0274800-00	Rice	cytosol	36.02	33.72
Os08t0375700-00	Rice	cytosol	34.78	33.14
CDY03015	Canola	cytosol	31.06	33.11
PGSC0003DMT400086770	Potato	cytosol	25.47	32.54
PGSC0003DMT400085417	Potato	cytosol	25.47	32.54
PGSC0003DMT400085217	Potato	cytosol	26.09	32.31
Os06t0113800-00	Rice	cytosol	32.92	31.93
Os09t0412050-00	Rice	cytosol	32.92	31.55
Os09t0273800-01	Rice	cytosol	32.3	31.14
PGSC0003DMT400093573	Potato	cytosol	28.57	30.46
Solyc03g112710.1.1	Tomato	cytosol	27.95	29.8
PGSC0003DMT400087694	Potato	cytosol	27.33	29.33
PGSC0003DMT400088820	Potato	cytosol	27.33	29.14
PGSC0003DMT400090609	Potato	cytosol	27.33	29.14
PGSC0003DMT400088220	Potato	cytosol	27.33	29.14
PGSC0003DMT400093419	Potato	cytosol	27.33	29.14
PGSC0003DMT400038385	Potato	cytosol	27.33	29.14
GSMUA_Achr4P25740_001	Banana	cytosol	26.71	29.05
VIT_19s0085g00180.t01	Wine grape	cytosol	27.33	28.95
Os09t0275200-01	Rice	cytosol	28.57	28.75
VIT_15s0045g00490.t01	Wine grape	cytosol	26.71	28.48
PGSC0003DMT400096238	Potato	cytosol	26.09	28.19
PGSC0003DMT400019185	Potato	cytosol	31.06	27.78
VIT_19s0085g00190.t01	Wine grape	cytosol	26.71	27.39
Solyc11g008400.1.1	Tomato	cytosol	30.43	27.22
PGSC0003DMT400097239	Potato	cytosol	25.47	27.15
GSMUA_Achr4P25750_001	Banana	cytosol	29.19	26.55
PGSC0003DMT400088621	Potato	cytosol	19.25	26.5
PGSC0003DMT400091657	Potato	cytosol	24.84	25.32
VIT_10s0003g05820.t01	Wine grape	cytosol	25.47	25.31
Os07t0625600-00	Rice	cytosol	27.33	24.72
Os07t0625500-01	Rice	cytosol	26.71	24.71
PGSC0003DMT400095953	Potato	cytosol	24.22	24.68
Solyc11g008240.1.1	Tomato	cytosol	23.6	24.05
Solyc11g008230.1.1	Tomato	cytosol	23.6	24.05
PGSC0003DMT400093338	Potato	cytosol	23.6	22.62
Solyc03g093190.1.1	Tomato	cytosol	16.77	22.13
Os07t0624900-00	Rice	cytosol	26.71	21.5
Os10t0438100-00	Rice	cytosol	25.47	18.64
KRH13748	Soybean	cytosol	21.12	18.58
PGSC0003DMT400019237	Potato	cytosol	21.74	18.52
PGSC0003DMT400089461	Potato	cytosol	13.04	16.54
Solyc11g008420.1.1	Tomato	cytosol	19.25	16.4
PGSC0003DMT400096074	Potato	cytosol	16.15	15.12

Protein Annotations

EnsemblPlants:Os02t0101600-00	EnsemblPlantsGene:Os02g0101600	Gene3D:3.30.710.10	GO:GO:0006511	GO:GO:0008150	GO:GO:0008152
GO:GO:0009056	GO:GO:0009987	GO:GO:0019538	InterPro:SKP1-like	InterPro:SKP1/BTB/POZ_sf	InterPro:Skp1_comp_POZ
PANTHER:PTHR11165	PANTHER:PTHR11165:SF24	PFAM:PF03931	ProteinID:BAS76515.1	SEG:seg	SMART:SM00512
SUPFAM:SSF54695	UniParc:UPI0003938AB9	UniProt:A0A0P0VDK6	MapMan:19.2.2.8.1.1	:	:

Description

Similar to SKP1-like protein 1A. (Os02t0101600-00)

Coordinates

chr2:-:83413..85637

Molecular Weight (calculated)

17321.3 Da

IEP (calculated)

4.977

GRAVY (calculated)

-0.540

Length

161 amino acids

Sequence
(BLAST)

001: MAAAAEGEKK MITLKSSDGE EFEVEAVGME SQTIRHMIED KCADNGIPLP NVNSKILSKV IEYCNKHVHA SADDSTSSAD LKNWTPTSSR STRPPSSTSS
101: CAEFVQIYLG CTLLPTLGCK LSQHQGMGLL DLSCADRCRH DQGQDSGGNP QDLQHQEGLG P

Best Arabidopsis Sequence Match ( AT1G20140.1 )
(BLAST)

001: MAETKKMIIL KSSDGESFEI EEAVAVKSQT IKHMIEDDCA DNGIPLPNVT GAILAKVIEY CKKHVEAAAE AGGDKDFYGS AENDELKNWD SEFVKVDQPT
101: LFDLILAANY LNIGGLLDLT CKAVADQMRG KTPEQMRAHF NIKNDYTPEE EAEVRNENKW AFE

Arabidopsis Description

ASK4SK4 [Source:UniProtKB/TrEMBL;Acc:A0A178W187]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.