Factsheet for TraesCS6B01G008800.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2
mitochondrion 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	mitochondrion
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS6D01G002600.1	Wheat	cytosol	82.86	82.86
TraesCS5B01G099600.1	Wheat	cytosol	74.86	74.86
HORVU7Hr1G099840.1	Barley	cytosol	72.57	72.57
TraesCS6B01G024700.1	Wheat	cytosol	69.14	72.02
HORVU7Hr1G099950.1	Barley	cytosol	69.71	70.52
HORVU7Hr1G099860.2	Barley	cytosol, mitochondrion, nucleus	70.29	70.29
TraesCS6B01G004300.1	Wheat	cytosol	64.0	68.71
TraesCS5B01G474100.1	Wheat	cytosol	60.0	64.81
TraesCS3B01G308600.1	Wheat	cytosol	60.0	64.42
TraesCS2B01G590600.1	Wheat	cytosol	63.43	63.79
TraesCS3B01G566400.1	Wheat	cytosol	52.0	63.64
TraesCS6B01G053400.1	Wheat	cytosol	48.0	61.31
TraesCS7B01G098900.1	Wheat	cytosol	61.14	61.14
TraesCS2B01G442100.1	Wheat	mitochondrion	61.14	60.11
TraesCS7B01G492300.1	Wheat	cytosol	59.43	59.09
TraesCS7B01G492200.1	Wheat	cytosol	58.86	58.52
TraesCS7B01G492500.1	Wheat	cytosol	57.71	57.39
TraesCS7B01G492400.1	Wheat	cytosol	57.14	56.82
TraesCS3B01G406500.1	Wheat	cytosol	52.57	56.44
TraesCS5B01G331700.1	Wheat	cytosol	53.71	55.62
HORVU7Hr1G099790.1	Barley	cytosol, plastid	60.0	53.3
TraesCS5B01G165700.1	Wheat	cytosol	50.86	50.86
TraesCS3B01G027600.1	Wheat	cytosol	47.43	50.3
TraesCS5B01G331600.1	Wheat	cytosol	45.71	49.69
PGSC0003DMT400088621	Potato	cytosol	32.0	47.86
CDY03015	Canola	cytosol	40.0	46.36
PGSC0003DMT400093573	Potato	cytosol	39.43	45.7
PGSC0003DMT400038385	Potato	cytosol	39.43	45.7
PGSC0003DMT400088220	Potato	cytosol	39.43	45.7
TraesCS4B01G337400.1	Wheat	cytosol	41.14	45.57
PGSC0003DMT400086770	Potato	cytosol	32.57	45.24
PGSC0003DMT400090072	Potato	cytosol	26.29	45.1
PGSC0003DMT400090609	Potato	cytosol	38.86	45.03
Solyc03g112710.1.1	Tomato	cytosol	38.29	44.37
PGSC0003DMT400088820	Potato	cytosol	38.29	44.37
Os02t0101600-00	Rice	cytosol	40.57	44.1
PGSC0003DMT400085217	Potato	cytosol	32.0	43.08
PGSC0003DMT400087694	Potato	cytosol	36.57	42.67
GSMUA_Achr4P25740_001	Banana	cytosol	36.0	42.57
Solyc11g008230.1.1	Tomato	cytosol	38.29	42.41
PGSC0003DMT400097239	Potato	cytosol	36.57	42.38
VIT_19s0085g00180.t01	Wine grape	cytosol	36.57	42.11
PGSC0003DMT400095953	Potato	cytosol	37.71	41.77
PGSC0003DMT400093419	Potato	cytosol	36.0	41.72
TraesCS5B01G372700.1	Wheat	cytosol	37.71	40.74
TraesCS5B01G169700.1	Wheat	cytosol	46.29	40.5
VIT_15s0045g00490.t01	Wine grape	cytosol	34.86	40.4
PGSC0003DMT400088079	Potato	cytosol	26.29	40.0
PGSC0003DMT400091657	Potato	cytosol	36.0	39.87
VIT_10s0003g05820.t01	Wine grape	cytosol	36.57	39.51
PGSC0003DMT400085417	Potato	cytosol	28.0	38.89
GSMUA_Achr4P25750_001	Banana	cytosol	38.86	38.42
PGSC0003DMT400096238	Potato	cytosol	32.57	38.26
PGSC0003DMT400089461	Potato	cytosol	27.43	37.8
TraesCS3B01G092200.1	Wheat	cytosol	35.43	37.35
VIT_19s0085g00190.t01	Wine grape	cytosol	33.14	36.94
Solyc11g008240.1.1	Tomato	cytosol	33.14	36.71
PGSC0003DMT400019185	Potato	cytosol	37.14	36.11
Solyc03g093190.1.1	Tomato	cytosol	25.14	36.07
PGSC0003DMT400093338	Potato	cytosol	33.71	35.12
Solyc11g008400.1.1	Tomato	cytosol	36.0	35.0
KRH13748	Soybean	cytosol	32.57	31.15
PGSC0003DMT400019237	Potato	cytosol	33.14	30.69
TraesCS1B01G156000.1	Wheat	cytosol	41.14	30.51
Solyc11g008420.1.1	Tomato	cytosol	30.86	28.57
PGSC0003DMT400096074	Potato	cytosol	26.86	27.33
TraesCS3B01G340200.1	Wheat	cytosol	32.0	13.43
TraesCS3B01G340100.1	Wheat	nucleus	36.0	12.12

Protein Annotations

MapMan:19.2.2.8.1.1	Gene3D:3.30.710.10	GO:GO:0006511	GO:GO:0008150	GO:GO:0008152	GO:GO:0009056
GO:GO:0009987	GO:GO:0019538	PFAM:PF01466	PFAM:PF03931	PIRSF:PIRSF028729	PANTHER:PTHR11165
PANTHER:PTHR11165:SF89	InterPro:SKP1	InterPro:SKP1-like	InterPro:SKP1-like_dim_sf	InterPro:SKP1/BTB/POZ_sf	SMART:SM00512
SUPFAM:SSF54695	SUPFAM:SSF81382	InterPro:Skp1_comp_POZ	InterPro:Skp1_comp_dimer	EnsemblPlantsGene:TraesCS6B01G008800	EnsemblPlants:TraesCS6B01G008800.1

Description

No Description!

Coordinates

chr6B:-:5714116..5715260

Molecular Weight (calculated)

19690.6 Da

IEP (calculated)

4.597

GRAVY (calculated)

-0.265

Length

175 amino acids

Sequence
(BLAST)

001: MATSDAGKEK MIMLQSSDGE EFRVEEVVTM ESQTIRHMIE DDCADKAIPI PNINSEILSK VIEYCNKHVT AKPGNVSTVS PGASASNTVA PATIAEDLKI
101: WDAEFIKINH ATLFDLIQVA RYLKIKGLLD LTCQTIADMI SGKTMEEIRN FFNIKSDYLP KEEEKICREN QWTFQ

Best Arabidopsis Sequence Match ( AT1G20140.1 )
(BLAST)

001: MAETKKMIIL KSSDGESFEI EEAVAVKSQT IKHMIEDDCA DNGIPLPNVT GAILAKVIEY CKKHVEAAAE AGGDKDFYGS AENDELKNWD SEFVKVDQPT
101: LFDLILAANY LNIGGLLDLT CKAVADQMRG KTPEQMRAHF NIKNDYTPEE EAEVRNENKW AFE

Arabidopsis Description

ASK4SK4 [Source:UniProtKB/TrEMBL;Acc:A0A178W187]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.