Factsheet for TraesCS3B01G340200.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2
mitochondrion 1
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3A01G297000.1	Wheat	cytosol	94.24	74.15
TraesCS3D01G305500.1	Wheat	cytosol	90.65	73.97
TraesCS3B01G340100.1	Wheat	nucleus	82.97	66.54
HORVU3Hr1G074970.1	Barley	cytosol, nucleus	39.09	64.68
TraesCS6B01G004300.1	Wheat	cytosol	16.79	42.94
TraesCS5B01G331700.1	Wheat	cytosol	17.03	42.01
CDY03015	Canola	cytosol	15.11	41.72
PGSC0003DMT400038385	Potato	cytosol	14.87	41.06
PGSC0003DMT400088621	Potato	cytosol	11.51	41.03
TraesCS3B01G566400.1	Wheat	cytosol	13.91	40.56
TraesCS6B01G053400.1	Wheat	cytosol	13.19	40.15
TraesCS5B01G474100.1	Wheat	cytosol	15.59	40.12
TraesCS3B01G027600.1	Wheat	cytosol	15.59	39.39
TraesCS2B01G590600.1	Wheat	cytosol	16.31	39.08
PGSC0003DMT400088820	Potato	cytosol	14.15	39.07
PGSC0003DMT400090609	Potato	cytosol	14.15	39.07
PGSC0003DMT400093573	Potato	cytosol	14.15	39.07
TraesCS7B01G098900.1	Wheat	cytosol	16.31	38.86
TraesCS3B01G308600.1	Wheat	cytosol	15.11	38.65
TraesCS5B01G169700.1	Wheat	cytosol	18.47	38.5
Solyc03g112710.1.1	Tomato	cytosol	13.91	38.41
PGSC0003DMT400087694	Potato	cytosol	13.67	38.0
PGSC0003DMT400093419	Potato	cytosol	13.67	37.75
PGSC0003DMT400088220	Potato	cytosol	13.67	37.75
TraesCS5B01G165700.1	Wheat	cytosol	15.83	37.71
VIT_19s0085g00180.t01	Wine grape	cytosol	13.67	37.5
PGSC0003DMT400097239	Potato	cytosol	13.43	37.09
OQU90298	Sorghum	cytosol	30.94	36.96
TraesCS3B01G092200.1	Wheat	cytosol	14.63	36.75
TraesCS5B01G331600.1	Wheat	cytosol	14.15	36.65
VIT_15s0045g00490.t01	Wine grape	cytosol	13.19	36.42
TraesCS5B01G372700.1	Wheat	cytosol	14.15	36.42
TraesCS2B01G442100.1	Wheat	mitochondrion	15.35	35.96
PGSC0003DMT400096238	Potato	cytosol	12.71	35.57
TraesCS4B01G337400.1	Wheat	cytosol	13.43	35.44
PGSC0003DMT400088079	Potato	cytosol	9.59	34.78
PGSC0003DMT400085217	Potato	cytosol	10.79	34.62
TraesCS5B01G099600.1	Wheat	cytosol	14.39	34.29
PGSC0003DMT400093338	Potato	cytosol	13.67	33.93
VIT_19s0085g00190.t01	Wine grape	cytosol	12.71	33.76
Solyc11g008230.1.1	Tomato	cytosol	12.71	33.54
PGSC0003DMT400019185	Potato	cytosol	14.39	33.33
VIT_10s0003g05820.t01	Wine grape	cytosol	12.95	33.33
TraesCS7B01G492300.1	Wheat	cytosol	13.91	32.95
PGSC0003DMT400095953	Potato	cytosol	12.47	32.91
Solyc11g008400.1.1	Tomato	cytosol	14.15	32.78
TraesCS7B01G492200.1	Wheat	cytosol	13.67	32.39
GSMUA_Achr4P25750_001	Banana	cytosol	13.67	32.2
TraesCS6B01G008800.1	Wheat	cytosol	13.43	32.0
TraesCS7B01G492500.1	Wheat	cytosol	13.43	31.82
PGSC0003DMT400086770	Potato	cytosol	9.59	31.75
Solyc11g008240.1.1	Tomato	cytosol	11.99	31.65
TraesCS6B01G024700.1	Wheat	cytosol	12.71	31.55
PGSC0003DMT400091657	Potato	cytosol	11.75	31.01
PGSC0003DMT400085417	Potato	cytosol	9.35	30.95
PGSC0003DMT400089461	Potato	cytosol	9.35	30.71
TraesCS3B01G406500.1	Wheat	cytosol	11.99	30.67
TraesCS7B01G492400.1	Wheat	cytosol	12.71	30.11
GSMUA_Achr4P25740_001	Banana	cytosol	10.55	29.73
Solyc03g093190.1.1	Tomato	cytosol	8.63	29.51
PGSC0003DMT400090072	Potato	cytosol	6.95	28.43
PGSC0003DMT400019237	Potato	cytosol	12.23	26.98
Solyc11g008420.1.1	Tomato	cytosol	11.75	25.93
PGSC0003DMT400096074	Potato	cytosol	10.55	25.58
TraesCS1B01G156000.1	Wheat	cytosol	14.39	25.42
KRH13748	Soybean	cytosol	10.79	24.59

Protein Annotations

EnsemblPlants:TraesCS3B01G340200.1	EnsemblPlantsGene:TraesCS3B01G340200	Gene3D:3.30.710.10	GO:GO:0006511	GO:GO:0008150	GO:GO:0008152
GO:GO:0009056	GO:GO:0009987	GO:GO:0019538	InterPro:SKP1-like	InterPro:SKP1-like_dim_sf	InterPro:SKP1/BTB/POZ_sf
InterPro:Skp1_comp_POZ	InterPro:Skp1_comp_dimer	PANTHER:PTHR11165	PANTHER:PTHR11165:SF90	PFAM:PF01466	PFAM:PF03931
SEG:seg	SMART:SM00512	SUPFAM:SSF54695	SUPFAM:SSF81382	MapMan:19.2.2.8.1.1	:

Description

No Description!

Coordinates

chr3B:-:546182299..546183812

Molecular Weight (calculated)

45022.9 Da

IEP (calculated)

4.314

GRAVY (calculated)

-0.240

Length

417 amino acids

Sequence
(BLAST)

001: MEGKLTWFSE IALSEKGMSA AERERRERQR FSGTKGQRPE EKGAMEEVSG KKEIFFFMAS AVITLESSDG MLFTVSEEAA RLSVPLADMI DQGCAGGIIQ
101: LPDVDARALA TVIEYCNKHA DAASANSRVD EGSSSCNSEA SVEALMEWDR KLVDGLSQDA LCDVIIAAKF LHIKGLFDAA CQKVAVVDQI EEEDVCTWFS
201: GLTPFSEKGT AAAEGARTNG QRPEKKGAMG EEAEQVAGEN DTFFFGASGK IITLKSSDGM LFKVSEAAAR LSVLLADMID QGCAKGIIQL PNVDARALAT
301: VIEYCNEHAD ATATANPDAN HGVAEGSSSC NSEASGEALK EWDRKLVDGL SQDALYDLIM ATNFLHIKGL LDAACQKVAD MIKGKSVEQT RKMFGIATDF
401: TEEEEELRKE SPWAFEE

Best Arabidopsis Sequence Match ( AT3G21860.1 )
(BLAST)

001: MSTKKIILKS SDGHSFEVEE EAACQCQTIA HMSEDDCTDN GIPLPEVTGK ILEMVIEYCN KHHVDAANPC SDEDLKKWDK EFMEKYQSTI FDLIMAANYL
101: NIKSLLDLAC QTVADMIKDN TVEHTRKFFN IENDYTHEEE EAVRRENQWG FE

Arabidopsis Description

ASK10SKP1-like protein 10 [Source:UniProtKB/Swiss-Prot;Acc:Q9LSX8]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.