Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- golgi 2
- extracellular 1
- plasma membrane 1
- endoplasmic reticulum 1
- vacuole 1
- cytosol 3
- mitochondrion 1
- plastid 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Os09t0273800-01 | Rice | cytosol | 67.86 | 68.26 |
| Os08t0375500-00 | Rice | cytosol | 60.12 | 59.76 |
| Os08t0375700-00 | Rice | cytosol | 60.12 | 59.76 |
| Os09t0274800-00 | Rice | cytosol | 55.95 | 54.65 |
| PGSC0003DMT400088621 | Potato | cytosol | 37.5 | 53.85 |
| Os11t0456300-01 | Rice | plasma membrane | 55.36 | 53.76 |
| Os09t0539500-01 | Rice | cytosol, plasma membrane, plastid | 55.95 | 53.71 |
| Os06t0113800-00 | Rice | cytosol | 48.81 | 49.4 |
| PGSC0003DMT400088820 | Potato | cytosol | 42.86 | 47.68 |
| CDY03015 | Canola | cytosol | 42.86 | 47.68 |
| PGSC0003DMT400038385 | Potato | cytosol | 42.86 | 47.68 |
| VIT_19s0085g00180.t01 | Wine grape | cytosol | 42.86 | 47.37 |
| PGSC0003DMT400090609 | Potato | cytosol | 42.26 | 47.02 |
| GSMUA_Achr4P25740_001 | Banana | cytosol | 41.07 | 46.62 |
| PGSC0003DMT400093573 | Potato | cytosol | 41.67 | 46.36 |
| Solyc03g112710.1.1 | Tomato | cytosol | 41.67 | 46.36 |
| PGSC0003DMT400088220 | Potato | cytosol | 40.48 | 45.03 |
| PGSC0003DMT400097239 | Potato | cytosol | 40.48 | 45.03 |
| PGSC0003DMT400087694 | Potato | cytosol | 38.69 | 43.33 |
| PGSC0003DMT400093419 | Potato | cytosol | 38.69 | 43.05 |
| Os09t0275200-01 | Rice | cytosol | 40.48 | 42.5 |
| Solyc11g008230.1.1 | Tomato | cytosol | 39.88 | 42.41 |
| OQU76826 | Sorghum | cytosol | 43.45 | 42.2 |
| Os07t0625500-01 | Rice | cytosol | 41.67 | 40.23 |
| Solyc03g093190.1.1 | Tomato | cytosol | 29.17 | 40.16 |
| GSMUA_Achr4P25750_001 | Banana | cytosol | 42.26 | 40.11 |
| VIT_15s0045g00490.t01 | Wine grape | cytosol | 35.71 | 39.74 |
| Os07t0625600-00 | Rice | cytosol | 41.67 | 39.33 |
| PGSC0003DMT400096238 | Potato | cytosol | 34.52 | 38.93 |
| VIT_10s0003g05820.t01 | Wine grape | cytosol | 37.5 | 38.89 |
| PGSC0003DMT400095953 | Potato | cytosol | 36.31 | 38.61 |
| PGSC0003DMT400089461 | Potato | cytosol | 29.17 | 38.58 |
| PGSC0003DMT400085217 | Potato | cytosol | 29.76 | 38.46 |
| PGSC0003DMT400090072 | Potato | cytosol | 23.21 | 38.24 |
| VIT_19s0085g00190.t01 | Wine grape | cytosol | 35.71 | 38.22 |
| PGSC0003DMT400086770 | Potato | cytosol | 28.57 | 38.1 |
| PGSC0003DMT400093338 | Potato | cytosol | 37.5 | 37.5 |
| PGSC0003DMT400091657 | Potato | cytosol | 34.52 | 36.71 |
| PGSC0003DMT400019185 | Potato | cytosol | 39.29 | 36.67 |
| Solyc11g008400.1.1 | Tomato | cytosol | 39.29 | 36.67 |
| PGSC0003DMT400088079 | Potato | cytosol | 25.0 | 36.52 |
| KRH13748 | Soybean | cytosol | 39.29 | 36.07 |
| Os10t0438100-00 | Rice | cytosol | 47.02 | 35.91 |
| PGSC0003DMT400085417 | Potato | cytosol | 26.79 | 35.71 |
| Os07t0624900-00 | Rice | cytosol | 41.67 | 35.0 |
| Solyc11g008240.1.1 | Tomato | cytosol | 31.55 | 33.54 |
| Os02t0101600-00 | Rice | cytosol | 31.55 | 32.92 |
| PGSC0003DMT400096074 | Potato | cytosol | 32.74 | 31.98 |
| PGSC0003DMT400019237 | Potato | cytosol | 33.33 | 29.63 |
| Solyc11g008420.1.1 | Tomato | cytosol | 32.74 | 29.1 |
Protein Annotations
| MapMan:19.2.2.8.1.1 | Gene3D:3.30.710.10 | UniProt:A0A0P0XN22 | ProteinID:BAT08052.1 | GO:GO:0003674 | GO:GO:0003824 |
| GO:GO:0005975 | GO:GO:0006004 | GO:GO:0006511 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009056 |
| GO:GO:0009987 | GO:GO:0016740 | GO:GO:0016757 | GO:GO:0019538 | EnsemblPlantsGene:Os09g0412050 | EnsemblPlants:Os09t0412050-00 |
| PFAM:PF01466 | PFAM:PF03931 | PIRSF:PIRSF028729 | PANTHER:PTHR11165 | PANTHER:PTHR11165:SF89 | InterPro:SKP1 |
| InterPro:SKP1-like | InterPro:SKP1-like_dim_sf | InterPro:SKP1/BTB/POZ_sf | SMART:SM00512 | SUPFAM:SSF54695 | SUPFAM:SSF81382 |
| InterPro:Skp1_comp_POZ | InterPro:Skp1_comp_dimer | UniParc:UPI0003939B07 | SEG:seg | : | : |
Description
Similar to Skp1-like protein. (Os09t0412050-00)
Coordinates
chr9:-:14628150..14628656
Molecular Weight (calculated)
17935.1 Da
IEP (calculated)
3.934
GRAVY (calculated)
0.135
Length
168 amino acids
Sequence
(BLAST)
(BLAST)
001: MAEAAAKEVA GAAAAAGDMI LLISSDGQRF EVAQAVASMS RLVRNMVEDE CTDNGVPLPN VPSAVLAKVL EYCSEHAAAA AAAGEEVEEL KSFDAAFIEV
101: DNATLFDLIL AANYLNVPCL LALACQRAAD LIRGKTVEEI RAEFNIANDF TPEEEAEIRK ENAWAFQD
101: DNATLFDLIL AANYLNVPCL LALACQRAAD LIRGKTVEEI RAEFNIANDF TPEEEAEIRK ENAWAFQD
001: MAETKKMIIL KSSDGESFEI EEAVAVKSQT IKHMIEDDCA DNGIPLPNVT GAILAKVIEY CKKHVEAAAE AGGDKDFYGS AENDELKNWD SEFVKVDQPT
101: LFDLILAANY LNIGGLLDLT CKAVADQMRG KTPEQMRAHF NIKNDYTPEE EAEVRNENKW AFE
101: LFDLILAANY LNIGGLLDLT CKAVADQMRG KTPEQMRAHF NIKNDYTPEE EAEVRNENKW AFE
Arabidopsis Description
ASK4SK4 [Source:UniProtKB/TrEMBL;Acc:A0A178W187]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.