Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| EER99267 | Sorghum | cytosol | 59.65 | 58.96 |
| Zm00001d049230_P001 | Maize | mitochondrion | 56.14 | 54.55 |
| PGSC0003DMT400088621 | Potato | cytosol | 34.5 | 50.43 |
| PGSC0003DMT400090609 | Potato | cytosol | 42.11 | 47.68 |
| VIT_19s0085g00180.t01 | Wine grape | cytosol | 42.11 | 47.37 |
| CDY03015 | Canola | cytosol | 41.52 | 47.02 |
| PGSC0003DMT400038385 | Potato | cytosol | 40.94 | 46.36 |
| PGSC0003DMT400093573 | Potato | cytosol | 40.35 | 45.7 |
| Solyc03g112710.1.1 | Tomato | cytosol | 40.35 | 45.7 |
| PGSC0003DMT400088820 | Potato | cytosol | 39.77 | 45.03 |
| Zm00001d007590_P001 | Maize | cytosol | 47.95 | 43.62 |
| PGSC0003DMT400087694 | Potato | cytosol | 38.01 | 43.33 |
| PGSC0003DMT400088220 | Potato | cytosol | 38.01 | 43.05 |
| VIT_15s0045g00490.t01 | Wine grape | cytosol | 38.01 | 43.05 |
| PGSC0003DMT400097239 | Potato | cytosol | 37.43 | 42.38 |
| Zm00001d007586_P001 | Maize | cytosol | 47.37 | 42.19 |
| Zm00001d007589_P001 | Maize | cytosol | 47.37 | 41.75 |
| VIT_10s0003g05820.t01 | Wine grape | cytosol | 39.18 | 41.36 |
| Zm00001d007659_P001 | Maize | cytosol | 46.2 | 41.15 |
| PGSC0003DMT400093419 | Potato | cytosol | 36.26 | 41.06 |
| GSMUA_Achr4P25740_001 | Banana | cytosol | 35.09 | 40.54 |
| Solyc11g008230.1.1 | Tomato | cytosol | 37.43 | 40.51 |
| PGSC0003DMT400095953 | Potato | cytosol | 37.43 | 40.51 |
| PGSC0003DMT400085217 | Potato | cytosol | 30.41 | 40.0 |
| VIT_19s0085g00190.t01 | Wine grape | cytosol | 35.67 | 38.85 |
| PGSC0003DMT400096238 | Potato | cytosol | 33.33 | 38.26 |
| PGSC0003DMT400091657 | Potato | cytosol | 35.09 | 37.97 |
| GSMUA_Achr4P25750_001 | Banana | cytosol | 39.18 | 37.85 |
| PGSC0003DMT400089461 | Potato | cytosol | 28.07 | 37.8 |
| PGSC0003DMT400086770 | Potato | cytosol | 27.49 | 37.3 |
| PGSC0003DMT400085417 | Potato | cytosol | 27.49 | 37.3 |
| PGSC0003DMT400088079 | Potato | cytosol | 24.56 | 36.52 |
| PGSC0003DMT400090072 | Potato | cytosol | 21.64 | 36.27 |
| Solyc03g093190.1.1 | Tomato | cytosol | 25.73 | 36.07 |
| PGSC0003DMT400093338 | Potato | cytosol | 34.5 | 35.12 |
| Solyc11g008240.1.1 | Tomato | cytosol | 31.58 | 34.18 |
| PGSC0003DMT400019185 | Potato | cytosol | 35.09 | 33.33 |
| Solyc11g008400.1.1 | Tomato | cytosol | 34.5 | 32.78 |
| KRH13748 | Soybean | cytosol | 34.5 | 32.24 |
| PGSC0003DMT400019237 | Potato | cytosol | 35.09 | 31.75 |
| Zm00001d042677_P001 | Maize | plastid | 47.95 | 31.06 |
| PGSC0003DMT400096074 | Potato | cytosol | 30.41 | 30.23 |
| Solyc11g008420.1.1 | Tomato | cytosol | 32.75 | 29.63 |
Protein Annotations
| EntrezGene:100282249 | MapMan:19.2.2.8.1.1 | Gene3D:3.30.710.10 | UniProt:A0A1D6IPT2 | GO:GO:0006511 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009056 | GO:GO:0009987 | GO:GO:0019538 | ProteinID:ONM61240.1 | PFAM:PF01466 |
| PFAM:PF03931 | PIRSF:PIRSF028729 | PANTHER:PTHR11165 | PANTHER:PTHR11165:SF89 | InterPro:SKP1 | InterPro:SKP1-like |
| InterPro:SKP1-like_dim_sf | InterPro:SKP1/BTB/POZ_sf | SMART:SM00512 | SUPFAM:SSF54695 | SUPFAM:SSF81382 | InterPro:Skp1_comp_POZ |
| InterPro:Skp1_comp_dimer | UniParc:UPI0002219AC0 | EnsemblPlantsGene:Zm00001d022618 | EnsemblPlants:Zm00001d022618_P001 | EnsemblPlants:Zm00001d022618_T001 | SEG:seg |
Description
SKP1-like protein 1A
Coordinates
chr7:+:181184204..181186273
Molecular Weight (calculated)
18823.0 Da
IEP (calculated)
4.081
GRAVY (calculated)
-0.262
Length
171 amino acids
Sequence
(BLAST)
(BLAST)
001: MAAEAAAAGK EKMRTLVSSD FKKFDVEESV ARESLIILNL MADCDDSDIP VFNVNANILD KVIAYCRKHA SAPRADGGDA EPSAASNKAS ADDLKSFDAE
101: FVDVDLVTLL ELIKAADYLE INGLLDLTCQ AVADMIKGKT PEEIRETFDI ENDFTPEEEA KVRRENQWAF E
101: FVDVDLVTLL ELIKAADYLE INGLLDLTCQ AVADMIKGKT PEEIRETFDI ENDFTPEEEA KVRRENQWAF E
001: MAETKKMIIL KSSDGESFEI EEAVAVKSQT IKHMIEDDCA DNGIPLPNVT GAILAKVIEY CKKHVEAAAE AGGDKDFYGS AENDELKNWD SEFVKVDQPT
101: LFDLILAANY LNIGGLLDLT CKAVADQMRG KTPEQMRAHF NIKNDYTPEE EAEVRNENKW AFE
101: LFDLILAANY LNIGGLLDLT CKAVADQMRG KTPEQMRAHF NIKNDYTPEE EAEVRNENKW AFE
Arabidopsis Description
ASK4SK4 [Source:UniProtKB/TrEMBL;Acc:A0A178W187]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.