Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- golgi 1
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| VIT_03s0038g02490.t01 | Wine grape | mitochondrion | 70.32 | 72.19 |
| VIT_18s0001g14860.t01 | Wine grape | cytosol, mitochondrion | 87.74 | 69.04 |
| VIT_19s0085g00180.t01 | Wine grape | cytosol | 51.61 | 52.63 |
| VIT_15s0045g00490.t01 | Wine grape | cytosol | 47.74 | 49.01 |
| VIT_10s0003g05820.t01 | Wine grape | cytosol | 49.03 | 46.91 |
| VIT_19s0085g00190.t01 | Wine grape | cytosol | 45.81 | 45.22 |
| VIT_03s0038g02480.t01 | Wine grape | cytosol | 85.16 | 30.14 |
| VIT_00s0349g00030.t01 | Wine grape | cytosol | 50.97 | 3.1 |
Protein Annotations
| EntrezGene:100257179 | EntrezGene:100267502 | wikigene:100267502 | MapMan:19.2.2.8.1.1 | Gene3D:3.30.710.10 | UniProt:A5C7K8 |
| EMBL:AM485152 | ProteinID:CAN73136 | ProteinID:CAN73136.1 | ProteinID:CCB60615 | ProteinID:CCB60615.1 | EMBL:FN596508 |
| GO:GO:0006511 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009056 | GO:GO:0009987 | GO:GO:0019538 |
| EntrezGene:LOC100257179 | EntrezGene:LOC100267502 | wikigene:LOC100267502 | PFAM:PF01466 | PFAM:PF03931 | PIRSF:PIRSF028729 |
| PANTHER:PTHR11165 | PANTHER:PTHR11165:SF88 | InterPro:SKP1 | InterPro:SKP1-like | InterPro:SKP1-like_dim_sf | InterPro:SKP1/BTB/POZ_sf |
| SMART:SM00512 | SUPFAM:SSF54695 | SUPFAM:SSF81382 | InterPro:Skp1_comp_POZ | InterPro:Skp1_comp_dimer | TIGR:TC57098 |
| UniParc:UPI0001522B76 | ArrayExpress:VIT_03s0038g02500 | EnsemblPlantsGene:VIT_03s0038g02500 | EnsemblPlants:VIT_03s0038g02500.t01 | RefSeq:XP_002279232 | RefSeq:XP_002279232.1 |
| RefSeq:XP_019074585.1 | : | : | : | : | : |
Description
No Description!
Coordinates
chr3:-:1746548..1748032
Molecular Weight (calculated)
17518.6 Da
IEP (calculated)
4.306
GRAVY (calculated)
-0.395
Length
155 amino acids
Sequence
(BLAST)
(BLAST)
001: MASSKTITLR SSDGEAFDLE EVVAVESQTI KHMIEDGCAD NAIPLPNVTS KILAKVIEYC KKHVETPKAE EHAVNDELKA WDADFVKVDQ ATLFDLILAA
101: NYLDIKSLLD LTCQTVADMI KGKTPEEIRK TFNIKNDFTP EEEEDVRREN QWAFE
101: NYLDIKSLLD LTCQTVADMI KGKTPEEIRK TFNIKNDFTP EEEEDVRREN QWAFE
001: MSAKKIVLKS SDGESFEVEE AVALESQTIA HMVEDDCVDN GVPLPNVTSK ILAKVIEYCK RHVEAAASKA EAVEGAATSD DDLKAWDADF MKIDQATLFE
101: LILAANYLNI KNLLDLTCQT VADMIKGKTP EEIRTTFNIK NDFTPEEEEE VRRENQWAFE
101: LILAANYLNI KNLLDLTCQT VADMIKGKTP EEIRTTFNIK NDFTPEEEEE VRRENQWAFE
Arabidopsis Description
SKP1ASKP1-like protein 1A [Source:UniProtKB/Swiss-Prot;Acc:Q39255]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.