Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
| Predictors | GFP | MS/MS | Papers | ||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| HORVU7Hr1G091190.1 | Barley | cytosol | 92.5 | 94.87 |
| HORVU6Hr1G050840.1 | Barley | cytosol | 92.5 | 92.5 |
| KRH66387 | Soybean | peroxisome | 55.0 | 33.85 |
| KRG88565 | Soybean | cytosol | 62.5 | 28.09 |
| GSMUA_Achr5P22560_001 | Banana | cytosol | 52.5 | 25.61 |
| HORVU4Hr1G077240.1 | Barley | cytosol | 87.5 | 8.77 |
| HORVU6Hr1G031720.2 | Barley | cytosol | 0.0 | 0.0 |
Protein Annotations
| EnsemblPlants:HORVU6Hr1G022460.1 | EnsemblPlantsGene:HORVU6Hr1G022460 | GO:GO:0003674 | GO:GO:0003735 | GO:GO:0005198 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005840 | GO:GO:0006412 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0015935 | GO:GO:0019538 | InterPro:Ribosomal_S2_euk/arc |
| PANTHER:PTHR11489 | PANTHER:PTHR11489:SF15 | UniParc:UPI000B481DD5 | UniProt:A0A287TKT8 | MapMan:35.2 | : |
Description
No Description!
Coordinates
chrchr6H:-:71585686..71586583
Molecular Weight (calculated)
4320.1 Da
IEP (calculated)
3.815
GRAVY (calculated)
-0.158
Length
40 amino acids
Sequence
(BLAST)
(BLAST)
1: TMAATAGEAP RALSQTEQDI QVMLAADVYL GTKNCDFQME
001: MAANGVATAG RQVSEKEADI QMMLSADVHL GTKNCNYQME RYVFKRRDDG IYIINLGKTW DKLQMAARVI VAIENPKDII VQSARPYGQR AVLKFAQYTG
101: VNAIAGRHTP GTFTNQMQTS FSEPRLLILT DPRTDHQPIK EGALGNIPTI AFCDTDSPMG FVDIGIPANN KGKHSIGCLF WLLARMVLQM RGTILAAQKW
201: DVMVNSRNTI RTCVSPTPDK DLDLFLLCRW ICFSTGSPKK QSKRVMKKLK YRPIMEWLVV TSGPLLKYLM LHGLVKSNSQ FLLHLQLALP LLLDGRLLLF
301: QLLVGSKSSL ISLARTRLDV DLIFLFSRFG ED
101: VNAIAGRHTP GTFTNQMQTS FSEPRLLILT DPRTDHQPIK EGALGNIPTI AFCDTDSPMG FVDIGIPANN KGKHSIGCLF WLLARMVLQM RGTILAAQKW
201: DVMVNSRNTI RTCVSPTPDK DLDLFLLCRW ICFSTGSPKK QSKRVMKKLK YRPIMEWLVV TSGPLLKYLM LHGLVKSNSQ FLLHLQLALP LLLDGRLLLF
301: QLLVGSKSSL ISLARTRLDV DLIFLFSRFG ED
Arabidopsis Description
RPSAb40S ribosomal protein SA [Source:UniProtKB/TrEMBL;Acc:F4J4W3]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.