CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 2
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, plastid
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH66387	Soybean	peroxisome	55.06	75.38
HORVU7Hr1G091190.1	Barley	cytosol	28.09	64.1
HORVU6Hr1G022460.1	Barley	cytosol	28.09	62.5
HORVU6Hr1G050840.1	Barley	cytosol	28.09	62.5
GSMUA_Achr5P22560_001	Banana	cytosol	26.97	29.27
KRH47681	Soybean	endoplasmic reticulum, nucleus	61.8	17.74
KRH06257	Soybean	nucleus	61.8	17.68
Zm00001d027919_P001	Maize	plastid	48.31	13.87
Zm00001d048256_P002	Maize	plasma membrane	47.19	13.64
Zm00001d048253_P001	Maize	plastid	47.19	13.64
Zm00001d048346_P001	Maize	plastid	47.19	13.55
KRH13835	Soybean	cytosol	47.19	13.5
TraesCS4A01G006000.1	Wheat	cytosol	44.94	13.33
TraesCS4B01G299100.1	Wheat	cytosol, extracellular, golgi, nucleus, unclear	44.94	12.99
TraesCS4D01G298000.1	Wheat	cytosol	44.94	12.99
Os03t0182600-02	Rice	cytosol, plasma membrane, plastid	42.7	12.46
KRH43602	Soybean	endoplasmic reticulum	48.31	11.35
Zm00001d027527_P001	Maize	mitochondrion	46.07	10.85
HORVU4Hr1G077240.1	Barley	cytosol	43.82	9.77

Protein Annotations

Gene3D:3.40.50.10490	MapMan:35.1	UniProt:A0A0R0EDS9	EnsemblPlantsGene:GLYMA_U004700	GO:GO:0003674	GO:GO:0003735
GO:GO:0005198	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005840
GO:GO:0006412	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0015935
GO:GO:0019538	ProteinID:KRG88561.1	ProteinID:KRG88562.1	ProteinID:KRG88563.1	ProteinID:KRG88564.1	EnsemblPlants:KRG88565
ProteinID:KRG88565	ProteinID:KRG88565.1	PANTHER:PTHR11489	PANTHER:PTHR11489:SF15	InterPro:Ribosomal_S2_euk/arc	InterPro:Ribosomal_S2_flav_dom_sf
SUPFAM:SSF52313	UniParc:UPI0006ED920C	:	:	:	:

Description

hypothetical protein

Coordinates

chrscaffold_137:-:27764..34812

Molecular Weight (calculated)

10257.3 Da

IEP (calculated)

8.066

GRAVY (calculated)

-0.424

Length

89 amino acids

Sequence
(BLAST)

1: MATATNAVAA PPRQLFQKEA DIQMMLAADV HLDTKNCDFQ MERNIFKHRN DEVVIYTSIC KVANFDASRK RELDRVQRSF GMWGDFAKC

Best Arabidopsis Sequence Match ( AT3G04770.2 )
(BLAST)

001: MAANGVATAG RQVSEKEADI QMMLSADVHL GTKNCNYQME RYVFKRRDDG IYIINLGKTW DKLQMAARVI VAIENPKDII VQSARPYGQR AVLKFAQYTG
101: VNAIAGRHTP GTFTNQMQTS FSEPRLLILT DPRTDHQPIK EGALGNIPTI AFCDTDSPMG FVDIGIPANN KGKHSIGCLF WLLARMVLQM RGTILAAQKW
201: DVMVDLFFYR EPEEAKQEGD EEAEVQADYG MVGGDQWTTA QISDAAWSGE VEQPISAAPA VGVTVAAGWE AASVPAAGWE

Arabidopsis Description

RPSAb40S ribosomal protein SA [Source:UniProtKB/TrEMBL;Acc:F4J4W3]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.