Subcellular Localization
min:
: max
Winner_takes_all: peroxisome
Predictor Summary:
Predictor Summary:
- nucleus 1
- peroxisome 3
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| HORVU7Hr1G091190.1 | Barley | cytosol | 35.38 | 58.97 |
| KRG88565 | Soybean | cytosol | 75.38 | 55.06 |
| HORVU6Hr1G022460.1 | Barley | cytosol | 33.85 | 55.0 |
| HORVU6Hr1G050840.1 | Barley | cytosol | 33.85 | 55.0 |
| GSMUA_Achr5P22560_001 | Banana | cytosol | 33.85 | 26.83 |
| KRH47681 | Soybean | endoplasmic reticulum, nucleus | 66.15 | 13.87 |
| KRH06257 | Soybean | nucleus | 64.62 | 13.5 |
| KRH13835 | Soybean | cytosol | 53.85 | 11.25 |
| Zm00001d027919_P001 | Maize | plastid | 50.77 | 10.65 |
| Zm00001d048256_P002 | Maize | plasma membrane | 49.23 | 10.39 |
| Zm00001d048253_P001 | Maize | plastid | 49.23 | 10.39 |
| TraesCS4A01G006000.1 | Wheat | cytosol | 47.69 | 10.33 |
| Zm00001d048346_P001 | Maize | plastid | 49.23 | 10.32 |
| TraesCS4D01G298000.1 | Wheat | cytosol | 47.69 | 10.06 |
| TraesCS4B01G299100.1 | Wheat | cytosol, extracellular, golgi, nucleus, unclear | 47.69 | 10.06 |
| Os03t0182600-02 | Rice | cytosol, plasma membrane, plastid | 44.62 | 9.51 |
| KRH43602 | Soybean | endoplasmic reticulum | 53.85 | 9.23 |
| Zm00001d027527_P001 | Maize | mitochondrion | 47.69 | 8.2 |
| HORVU4Hr1G077240.1 | Barley | cytosol | 46.15 | 7.52 |
Protein Annotations
| Gene3D:3.40.50.10490 | MapMan:35.2 | UniProt:A0A0R0KPE1 | EMBL:ACUP02001953 | EnsemblPlantsGene:GLYMA_03G103100 | GO:GO:0000028 |
| GO:GO:0000447 | GO:GO:0000461 | GO:GO:0003674 | GO:GO:0003735 | GO:GO:0005198 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005829 | GO:GO:0005840 | GO:GO:0006139 |
| GO:GO:0006407 | GO:GO:0006412 | GO:GO:0006810 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 |
| GO:GO:0009987 | GO:GO:0015935 | GO:GO:0016043 | GO:GO:0019538 | GO:GO:0022627 | GO:GO:0030686 |
| EnsemblPlants:KRH66387 | ProteinID:KRH66387 | ProteinID:KRH66387.1 | PANTHER:PTHR11489 | PANTHER:PTHR11489:SF15 | InterPro:Ribosomal_S2_euk/arc |
| InterPro:Ribosomal_S2_flav_dom_sf | SUPFAM:SSF52313 | UniParc:UPI0006ED5E37 | : | : | : |
Description
hypothetical protein
Coordinates
chr3:+:29645105..29646139
Molecular Weight (calculated)
7487.2 Da
IEP (calculated)
5.477
GRAVY (calculated)
0.042
Length
65 amino acids
Sequence
(BLAST)
(BLAST)
1: MAIATNVVAA PPCQLFQKEP DIQMMLAVDV HLDTKNCDFQ MEHNIFKHRN DEVVIIYINL QSCKL
001: MAANGVATAG RQVSEKEADI QMMLSADVHL GTKNCNYQME RYVFKRRDDG IYIINLGKTW DKLQMAARVI VAIENPKDII VQSARPYGQR AVLKFAQYTG
101: VNAIAGRHTP GTFTNQMQTS FSEPRLLILT DPRTDHQPIK EGALGNIPTI AFCDTDSPMG FVDIGIPANN KGKHSIGCLF WLLARMVLQM RGTILAAQKW
201: DVMVDLFFYR EPEEAKQEGD EEAEVQADYG MVGGDQWTTA QISDAAWSGE VEQPISAAPA VGVTVAAGWE AASVPAAGWE
101: VNAIAGRHTP GTFTNQMQTS FSEPRLLILT DPRTDHQPIK EGALGNIPTI AFCDTDSPMG FVDIGIPANN KGKHSIGCLF WLLARMVLQM RGTILAAQKW
201: DVMVDLFFYR EPEEAKQEGD EEAEVQADYG MVGGDQWTTA QISDAAWSGE VEQPISAAPA VGVTVAAGWE AASVPAAGWE
Arabidopsis Description
RPSAb40S ribosomal protein SA [Source:UniProtKB/TrEMBL;Acc:F4J4W3]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.