CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, plastid, cytosol

Predictor Summary:

extracellular 2
endoplasmic reticulum 2
vacuole 2
plasma membrane 2
golgi 2
plastid 4
cytosol 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, peroxisome, plastid
Any Predictor:	cytosol, peroxisome, plastid, secretory
BaCelLo:	secretory
EpiLoc:	plastid
iPSORT:	plastid
MultiLoc:	cytosol
Plant-mPloc:	plastid
PProwler:	secretory
WoLF PSORT:	plastid
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH36227	Soybean	nucleus	96.46	96.46
KRG92975	Soybean	endoplasmic reticulum	62.83	65.14
KRG92978	Soybean	plastid	49.56	49.12
KRH53728	Soybean	endoplasmic reticulum, nucleus	27.88	30.14
KRH64204	Soybean	nucleus	26.99	29.19

Protein Annotations

KEGG:00941+5.5.1.6	Gene3D:1.10.890.20	Gene3D:3.50.70.10	EntrezGene:732545	MapMan:9.2.2.2.1	EMBL:AY595414
EMBL:BT095642	UniProt:C6TDI3	InterPro:Chalcone_isomerase	InterPro:Chalcone_isomerase_3-sand	InterPro:Chalcone_isomerase_bundle_sf	InterPro:Chalcone_isomerase_sf
EnsemblPlantsGene:GLYMA_20G241600	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0005783	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009628
GO:GO:0009813	GO:GO:0016853	GO:GO:0016872	GO:GO:0045430	GO:GO:0080167	InterPro:IPR016088
InterPro:IPR016089	EnsemblPlants:KRG92977	ProteinID:KRG92977	ProteinID:KRG92977.1	PFAM:PF02431	PANTHER:PTHR28039
PANTHER:PTHR28039:SF8	MetaCyc:PWY-2002	MetaCyc:PWY-5059	MetaCyc:PWY-6325	MetaCyc:PWY-6787	MetaCyc:PWY-7397
UniProt:Q53B75	SUPFAM:SSF54626	UniParc:UPI0000508A8F	:	:	:

Description

CHI1B1hypothetical protein

Coordinates

chr20:+:47260665..47263191

Molecular Weight (calculated)

25028.7 Da

IEP (calculated)

5.022

GRAVY (calculated)

-0.308

Length

226 amino acids

Sequence
(BLAST)

001: MATPASITNV TVEFLQFPAL VTPPGSTKSY FLGGAGVRGL NIQEEFVKFT GIGVYLEDKA VSSLAAKWKG KSAAELLDSL DFYRDIIKGP FEKLIRGSKL
101: RTLDGREYVR KVSENCVAHM QSVGTYSDEE EKAIEEFRNA FKDQNFPPGS TVFYKQSPTG TLGLSFSKDE TIPEHEHAVI DNKPLSEAVL ETMIGEIPVS
201: PALKESLATR FHQFFKELEA NPNIEN

Best Arabidopsis Sequence Match ( AT3G55120.1 )
(BLAST)

001: MSSSNACASP SPFPAVTKLH VDSVTFVPSV KSPASSNPLF LGGAGVRGLD IQGKFVIFTV IGVYLEGNAV PSLSVKWKGK TTEELTESIP FFREIVTGAF
101: EKFIKVTMKL PLTGQQYSEK VTENCVAIWK QLGLYTDCEA KAVEKFLEIF KEETFPPGSS ILFALSPTGS LTVAFSKDDS IPETGIAVIE NKLLAEAVLE
201: SIIGKNGVSP GTRLSVAERL SQLMMKNKDE KEVSDHSVEE KLAKEN

Arabidopsis Description

CHI1Chalcone--flavonone isomerase 1 [Source:UniProtKB/Swiss-Prot;Acc:P41088]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.