CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

nucleus 1
cytosol 2
plastid 3
extracellular 4
endoplasmic reticulum 3
vacuole 3
plasma membrane 3
golgi 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	cytosol, nucleus, plastid, secretory
BaCelLo:	nucleus
EpiLoc:	cytosol
iPSORT:	plastid
MultiLoc:	cytosol
Plant-mPloc:	plastid
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH67884	Soybean	endoplasmic reticulum	95.58	95.58
KRH32679	Soybean	endoplasmic reticulum	80.53	79.82
KRH30835	Soybean	endoplasmic reticulum	78.76	78.07
KRH26594	Soybean	endoplasmic reticulum	69.91	71.17
KRH22710	Soybean	endoplasmic reticulum	67.26	51.01

Protein Annotations

Gene3D:1.10.10.1410	EntrezGene:100787024	MapMan:17.1.2.1.47	EMBL:ACUP02012146	EnsemblPlantsGene:GLYMA_19G193200	GO:GO:0002181
GO:GO:0003674	GO:GO:0003735	GO:GO:0005198	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0005829	GO:GO:0005840	GO:GO:0006412	GO:GO:0006414	GO:GO:0008150
GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0019538	GO:GO:0022625	GO:GO:0030529
InterPro:IPR038716	UniProt:K7MZ77	ProteinID:KRG96174.1	EnsemblPlants:KRG96175	ProteinID:KRG96175	ProteinID:KRG96175.1
HAMAP:MF_01478	InterPro:P1/P2_N_sf	PFAM:PF00428	PANTHER:PTHR21141	PANTHER:PTHR21141:SF72	InterPro:Ribosomal_L12
SignalP:SignalP-noTM	UniParc:UPI000233F5EF	SEG:seg	:	:	:

Description

hypothetical protein

Coordinates

chr19:-:45098400..45101211

Molecular Weight (calculated)

11236.0 Da

IEP (calculated)

4.024

GRAVY (calculated)

-0.017

Length

113 amino acids

Sequence
(BLAST)

001: MKVIAAYLLA VLGGNAAPSA DDLRTILGSV GADANDDNIS NFLSEVKGKD IAELIAAGRE KLASVPSGGG AAVSVAAAPG GGAAAPAAAE SKKEEKVEEK
101: EESDDDMGFS LFD

Best Arabidopsis Sequence Match ( AT2G27710.4 )
(BLAST)

1: MKVVAAYLLA VLSGKASPTS ADIKTILGSV GAETEDSQIE LLLKEVKGKD LAELIAAGRE KLASVPSGGG ASAAESKKEE KKEEKEESDD DMGFSLFE

Arabidopsis Description

RPP2BAT2G27710 protein [Source:UniProtKB/TrEMBL;Acc:B9DGN3]
SUBAcon: [extracellular,endoplasmic reticulum,vacuole,cytosol,plasma membrane,golgi]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.