CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

nucleus 1
plastid 2
cytosol 1
extracellular 4
endoplasmic reticulum 3
vacuole 3
plasma membrane 3
golgi 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	cytosol, plastid, secretory
BaCelLo:	nucleus
iPSORT:	plastid
MultiLoc:	cytosol
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH03906	Soybean	nucleus	69.16	40.67
KRH57185	Soybean	cytosol	68.72	40.41
KRH57190	Soybean	cytosol	67.84	40.1
KRH65148	Soybean	cytosol	16.3	8.33
KRH48239	Soybean	cytosol	16.3	8.3

Protein Annotations

EMBL:ACUP02010484	EnsemblPlants:KRH04710	EnsemblPlantsGene:GLYMA_17G180700	Gene3D:1.25.40.570	GO:GO:0003674	GO:GO:0008150
GO:GO:0008152	GO:GO:0009056	GO:GO:0009987	GO:GO:0019538	GO:GO:0030234	GO:GO:0043161
GO:GO:0050790	InterPro:PSMD6	InterPro:Rpn7/CSN1	PANTHER:PTHR14145	PANTHER:PTHR14145:SF1	PFAM:PF10602
ProteinID:KRH04710	ProteinID:KRH04710.1	UniParc:UPI0006ED5FF1	UniProt:A0A0R0FEV3	MapMan:19.2.6.2.2.6	:

Description

hypothetical protein

Coordinates

chr17:+:20659097..20661784

Molecular Weight (calculated)

26346.5 Da

IEP (calculated)

8.431

GRAVY (calculated)

0.178

Length

227 amino acids

Sequence
(BLAST)

001: MEYMLLVMSM IHRISETVLS TGIYAWLFGS ITKVFGNSMG EYPCQWYTHR PCTEENLGES EVCEAHLVKS LFFIRIMDKE KALEHLKVTK TKIVVVGQKM
101: DLVFYTLQLG FFDMDFDLIS KSIDKAKKKN RLEVYEGLYF MSTRNFKKAA KLFLGSISTF TTYEVFPCDT FILYTVLTII ISLDRVSLKQ KVVDSPKILT
201: MIGKIPYLSE FLNSLYDCQY KSFFLSI

Best Arabidopsis Sequence Match ( AT4G24820.2 )
(BLAST)

001: MDGGAEGSQQ PHLILANKLF LLTHPDVPDI EKVQLKSEVL DFIRSHGMAP LYETLIASSV LDLDQSLLES MRAANEEELK KLDEKIADAE ENLGESEVRE
101: AHLAKALYFI RISDKEKALE QLKLTEGKTV AVGQKMDVVF YTLQLAFFYM DFDLVSKSID KAKKLFEEGG DWERKNRLKV YEGLYCMSTR NFKKAASLFL
201: DSISTFTTYE IFPYETFIFY TVLTSIITLD RVSLKQKVVD APEILTVLGK IPFLSEFLNS LYECQYKAFF SAFAGMAVQI KYDRYLYPHF RFYMREVRTV
301: VYSQFLESYK SVTVEAMAKA FGVSVDFIDQ ELSRFIAAGK LHCKIDKVAG VLETNRPDAK NALYQATIKQ GDFLLNRIQK LSRVIDL

Arabidopsis Description

RPN726S proteasome non-ATPase regulatory subunit 6 homolog [Source:UniProtKB/Swiss-Prot;Acc:Q93Y35]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.