CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol, nucleus

Predictor Summary:

cytosol 4
extracellular 1
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

nucleus: 21132161

msms PMID: 21132161 doi

B Cooper, KB Campbell, J Feng, WM Garrett, R Frederick

Soybean Genomics and Improvement Laboratory, USDA-ARS, Beltsville, MD 20705, USA. bret.cooper@ars.usda.gov

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRG91421	Soybean	cytosol	96.19	96.19
KRH09171	Soybean	cytosol	84.46	82.52
KRH38640	Soybean	cytosol, golgi, plastid	84.75	80.95
VIT_16s0022g02340.t01	Wine grape	cytosol	76.83	75.72
CDY00501	Canola	cytosol	75.37	74.93
Bra028279.1-P	Field mustard	cytosol	75.07	74.64
CDY51025	Canola	cytosol	75.07	74.64
AT5G51830.1	Thale cress	cytosol	74.49	74.05
Bra029158.1-P	Field mustard	cytosol	74.19	73.76
CDY38879	Canola	cytosol	73.61	73.18
KRH17371	Soybean	cytosol	55.72	72.52
CDY32617	Canola	cytosol	73.31	70.22
KRH73007	Soybean	plastid	73.31	65.27
KRH23212	Soybean	endoplasmic reticulum	61.88	63.75
KRH34333	Soybean	cytosol, nucleus	60.7	63.3
KRG92467	Soybean	cytosol, nucleus	60.41	63.0
KRH10125	Soybean	endoplasmic reticulum, nucleus	60.7	62.73
KRH29617	Soybean	endoplasmic reticulum	60.12	61.93
KRH00623	Soybean	plastid	55.43	59.25
KRH24618	Soybean	cytosol, peroxisome, plastid	59.82	58.79
KRH40559	Soybean	plastid	61.58	58.17
KRH75791	Soybean	nucleus	34.9	25.48
KRH65986	Soybean	nucleus	31.09	24.09
KRH75089	Soybean	nucleus	31.67	18.85
KRH70953	Soybean	nucleus	31.09	18.5

Protein Annotations

EntrezGene:100816740	MapMan:3.1.4.4	Gene3D:3.40.1190.20	EMBL:ACUP02006672	InterPro:Carboh/pur_kinase_PfkB_CS	EnsemblPlantsGene:GLYMA_10G240800
GO:GO:0003674	GO:GO:0003824	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016301
GO:GO:0016310	GO:GO:0016740	GO:GO:0016773	UniProt:I1LDW8	InterPro:IPR029056	EnsemblPlants:KRH35400
ProteinID:KRH35400	ProteinID:KRH35400.1	PFAM:PF00294	PRINTS:PR00990	ScanProsite:PS00583	ScanProsite:PS00584
PANTHER:PTHR43085	PANTHER:PTHR43085:SF4	InterPro:PfkB_dom	InterPro:Ribo/fructo_kinase	InterPro:Ribokinase-like	SUPFAM:SSF53613
UniParc:UPI00023CD78C	SEG:seg	:	:	:	:

Description

hypothetical protein

Coordinates

chr10:-:46921096..46924650

Molecular Weight (calculated)

36813.0 Da

IEP (calculated)

4.824

GRAVY (calculated)

0.040

Length

341 amino acids

Sequence
(BLAST)

001: MAHFTSSGKS DNLTKEDCIG KSALVVCFGE ILIDFVPTVC GVSLAEAPAF KKAPGGAPAN VAVGISRLGG SSAFVGKVGA DEFGYMLVDI LKKNNVETSG
101: MKFDPNARTA LAFVTLRADG EREFLFFRNP SADMLLQESE LDENLIKKAK IFHYGSISLI DEPCKSAHLA AMRFAKESGC ILSYDPNLRL ALWPSAEAAR
201: DGIMSIWDQA DIIKISEEEI TFLTGGDDPY DDNVVLNKLF HPNLKLLIVT EGSEGCRYYT KEFKGRVAGV EVKPVDTTGA GDAFVSGIIY SLASDQSLFQ
301: NEEHLRKALY FANVCGAITV TERGAIPALP TKEAVLQFAA T

Best Arabidopsis Sequence Match ( AT1G66430.1 )
(BLAST)

001: MALQATTTTF CFSGPTFRST PHSLTSKRPI SIKATTSSPS RLSNSRSNLK GRALSSDGST QESPYVVCFG EMLIDFVPTT SGLSLADAPA FKKAPGGAPA
101: NVAVGIARLG GSSAFIGKVG EDEFGYMLAN ILKDNNVNND GMRFDPGART ALAFVTLTNE GEREFMFYRN PSADMLLEES ELDFDLIKKA KIFHYGSISL
201: ITEPCKSAHI SAAKAAKEAG VILSYDPNLR LPLWPSADNA REEILSIWET ADIIKISEEE IVFLTKGEDP YDDNVVRKLF HPKLKLLLVT EGPEGCRYYT
301: KDFSGRVHGL KVDVVDTTGA GDAFVAGILS QLANDLSLLQ DEERLREALM FANACGALTV KVRGAIPALP TKEAVHEALL KAVV

Arabidopsis Description

Probable fructokinase-6, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9C524]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.