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Soybean
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Soybean
Subcellular Localization
min:
: max

 
Winner_takes_all: endoplasmic reticulum

Predictor Summary:
  • cytosol 3
  • extracellular 3
  • endoplasmic reticulum 2
  • vacuole 2
  • plasma membrane 3
  • golgi 2
  • plastid 1
Predictors GFP MS/MS Papers
Winner Takes All:endoplasmic reticulum
Any Predictor:cytosol, plastid, secretory
BaCelLo:cytosol
EpiLoc:cytosol
iPSORT:secretory
MultiLoc:cytosol
Plant-mPloc:plastid
PProwler:secretory
WoLF PSORT:extracellular
YLoc:plasma membrane
 nucleus: 21132161
extracellular: 22945350
endoplasmic reticulum: 27224218
endoplasmic reticulum: 28499913
mitochondrion: 28499913
msms PMID: 21132161 doi
B Cooper, KB Campbell, J Feng, WM Garrett, R Frederick
Soybean Genomics and Improvement Laboratory, USDA-ARS, Beltsville, MD 20705, USA. bret.cooper@ars.usda.gov
msms PMID: 22945350 doi
C Liao, F Hochholdinger, C Li
Key Laboratory of Plant-Soil Interactions, Ministry of Education, Center for Resources, Environment and Food Security, China Agricultural University, Beijing, China.
msms PMID: 28499913 doi
S Komatsu, X Wang, X Yin, Y Nanjo, H Ohyanagi, K Sakata
Department of Life Science and Informatics, Maebashi Institute of Technology, Maebashi 371-0816, Japan. Electronic address: ksakata@maebashi-it.ac.jp., Institute of Crop Science, National Agriculture and Food Research Organization, Tsukuba 305-8518, Japan., Institute of Crop Science, National Agriculture and Food Research Organization, Tsukuba 305-8518, Japan; Faculty of Life and Environmental Sciences, University of Tsukuba, Tsukuba 305-8572, Japan., Institute of Crop Science, National Agriculture and Food Research Organization, Tsukuba 305-8518, Japan; Faculty of Life and Environmental Sciences, University of Tsukuba, Tsukuba 305-8572, Japan. Electronic address: komatsu.setsuko.fu@u.tsukuba.ac.jp., King Abdullah University of Science and Technology (KAUST), Computational Bioscience Research Center (CBRC), Thuwal 23955-6900, Saudi Arabia.
msms PMID: 27224218 doi
X Wang, S Komatsu
Graduate School of Life and Environmental Sciences, University of Tsukuba , Tsukuba 305-8572, Japan., National Institute of Crop Science, National Agriculture and Food Research Organization , Tsukuba 305-8518, Japan.
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
KRH10125 Soybean endoplasmic reticulum, nucleus 96.68 96.97
KRH29617 Soybean endoplasmic reticulum 89.43 89.43
KRH24618 Soybean cytosol, peroxisome, plastid 90.03 85.88
VIT_05s0102g00710.t01 Wine grape cytosol, extracellular, plasma membrane 85.5 85.76
PGSC0003DMT400069198 Potato extracellular 84.29 84.8
Solyc06g073190.2.1 Tomato extracellular 83.99 84.76
CDX67798 Canola cytosol 83.08 84.36
AT3G59480.1 Thale cress cytosol 82.48 83.74
CDX98377 Canola cytosol 82.48 83.74
CDX71907 Canola cytosol 82.18 83.44
Bra007452.1-P Field mustard cytosol 81.87 83.13
Bra003378.1-P Field mustard cytosol 81.87 83.13
CDY06000 Canola cytosol 81.87 83.13
Bra018248.1-P Field mustard cytosol 81.27 82.77
CDY10801 Canola cytosol 81.27 82.77
AT2G31390.1 Thale cress cytosol 80.97 82.46
CDY56614 Canola cytosol 80.97 82.46
Bra014540.1-P Field mustard cytosol 80.97 82.21
CDY15383 Canola cytosol 80.97 82.21
CDX89022 Canola cytosol 80.97 82.21
CDY00619 Canola cytosol 80.97 82.21
CDY23944 Canola cytosol 80.66 82.15
CDX84788 Canola cytosol 80.66 82.15
Bra022839.1-P Field mustard cytosol 80.36 81.85
AT1G06030.1 Thale cress cytosol 79.76 80.24
Bra015468.1-P Field mustard cytosol 71.6 80.07
CDY19092 Canola plastid, vacuole 81.57 79.88
GSMUA_Achr4P16250_001 Banana cytosol 72.51 77.42
GSMUA_Achr10P... Banana cytosol 74.62 76.95
GSMUA_Achr11P... Banana cytosol 75.23 76.15
AT1G06020.1 Thale cress cytosol 79.15 75.94
Bra030634.1-P Field mustard cytosol 79.46 75.79
GSMUA_Achr11P... Banana cytosol 75.23 75.68
CDX86540 Canola cytosol 78.85 75.65
GSMUA_Achr11P... Banana cytosol 75.53 75.08
GSMUA_AchrUn_... Banana cytosol 73.11 73.78
Zm00001d042536_P001 Maize cytosol 63.14 73.59
GSMUA_Achr6P12500_001 Banana cytosol 45.62 72.95
AT1G50390.1 Thale cress cytosol 32.02 72.6
EES04029 Sorghum cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole 70.69 72.45
CDY10167 Canola endoplasmic reticulum, golgi 80.06 72.21
CDY47709 Canola endoplasmic reticulum, golgi 73.41 71.89
Zm00001d012173_P001 Maize plasma membrane 70.09 71.83
Os01t0894300-01 Rice cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole 69.18 70.9
TraesCS3B01G433000.1 Wheat golgi 67.98 69.66
TraesCS3A01G400000.1 Wheat cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole 67.98 69.66
TraesCS3D01G394200.1 Wheat cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole 67.67 69.35
TraesCS5B01G285500.1 Wheat cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole 66.77 68.42
TraesCS5A01G286200.1 Wheat cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole 66.77 68.42
TraesCS5D01G293800.1 Wheat cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole 66.77 68.42
KRG92467 Soybean cytosol, nucleus 66.16 66.97
KRH34333 Soybean cytosol, nucleus 65.86 66.67
Bra032442.1-P Field mustard cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, plastid, vacuole 22.96 64.96
CDY15557 Canola cytosol 32.02 64.63
CDY09993 Canola cytosol 20.24 64.42
KRH17371 Soybean cytosol 49.55 62.6
KRG91421 Soybean cytosol 64.05 62.17
HORVU5Hr1G076230.5 Barley plastid 67.07 62.01
CDX71905 Canola mitochondrion 17.22 61.96
KRH35400 Soybean cytosol, nucleus 63.75 61.88
KRH09171 Soybean cytosol 62.54 59.31
KRH38640 Soybean cytosol, golgi, plastid 62.54 57.98
CDY05997 Canola cytosol, mitochondrion 23.26 57.46
KRH73007 Soybean plastid 64.05 55.35
KRH00623 Soybean plastid 50.45 52.35
KRH40559 Soybean plastid 56.5 51.8
KRH75791 Soybean nucleus 37.76 26.77
KRH65986 Soybean nucleus 32.93 24.77
KRH75089 Soybean nucleus 34.74 20.07
KRH70953 Soybean nucleus 34.14 19.72
Protein Annotations
EntrezGene:100814192MapMan:3.1.4.4Gene3D:3.40.1190.20EMBL:ACUP02008458InterPro:Carboh/pur_kinase_PfkB_CSEnsemblPlantsGene:GLYMA_13G344500
GO:GO:0003674GO:GO:0003824GO:GO:0008150GO:GO:0008152GO:GO:0009987GO:GO:0016301
GO:GO:0016310GO:GO:0016740GO:GO:0016773UniProt:I1M561InterPro:IPR029056EnsemblPlants:KRH23212
ProteinID:KRH23212ProteinID:KRH23212.1PFAM:PF00294PRINTS:PR00990ScanProsite:PS00583ScanProsite:PS00584
InterPro:PfkB_domInterPro:Ribo/fructo_kinaseInterPro:Ribokinase-likeSUPFAM:SSF53613UniParc:UPI0001CAA6D8:
Description
hypothetical protein
Coordinates
chr13:+:43554239..43558544
Molecular Weight (calculated)
35399.6 Da
IEP (calculated)
5.115
GRAVY (calculated)
0.052
Length
331 amino acids
Sequence
(BLAST)
001: MALNNGVPAT GTGLIVSFGE MLIDFVPTVS GVSLAEAPGF LKAPGGAPAN VAIAVSRLGG KAAFVGKLGD DEFGHMLAGI LKENGVRADG INFDQGARTA
101: LAFVTLRADG EREFMFYRNP SADMLLKPEE LNLELIRSAK VFHYGSISLI VEPCRSAHLK AMEVAKESGC LLSYDPNLRL PLWPSAEEAR KQILSIWEKA
201: DLIKVSDAEL EFLTGSDKID DESALSLWHP NLKLLLVTLG EHGSRYYTKS FKGSVDAFHV NTVDTTGAGD SFVGALLAKI VDDQSILEDE PRLREVLKFA
301: NACGAITTTQ KGAIPALPKE EAALKLIKGG S
Best Arabidopsis Sequence Match ( AT3G59480.1 )
(BLAST)
001: MAASNGEKSL IVSFGEMLID FVPTVSGVSL ADAPGFIKAP GGAPANVAIA ISRLGGRAAF VGKLGDDEFG HMLAGILKQN GVSAEGINFD TGARTALAFV
101: TLRSDGEREF MFYRNPSADM LLRPDELNLD VIRSAKVFHY GSISLIVEPC RSAHLKAMEV AKEAGALLSY DPNLRLPLWP SKEEAQKQIL SIWDKAEVIK
201: VSDEELMFLT GSDKVDDETA LSLWHSNLKL LLVTLGEKGC RYYTKSFRGS VDPFHVDAVD TTGAGDSFVG ALLCKIVDDR AVLEDEARLR EVLRLANACG
301: AITTTKKGAI PALPTESEVQ SLLKGN
Arabidopsis Description
Probable fructokinase-4 [Source:UniProtKB/Swiss-Prot;Acc:Q9M1B9]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.