CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, plastid, cytosol

Predictor Summary:

nucleus 1
plastid 2
cytosol 1
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 2
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, plasma membrane, plastid
Any Predictor:	cytosol, plastid, secretory
BaCelLo:	nucleus
iPSORT:	plastid
MultiLoc:	cytosol
PProwler:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS6A01G211700.1	Wheat	plastid	5.05	3.68
Solyc06g009940.1.1	Tomato	nucleus	2.02	2.78
KRH49261	Soybean	cytosol, mitochondrion	3.03	2.61
KRH37800	Soybean	endoplasmic reticulum, plasma membrane	2.02	1.08
HORVU4Hr1G045260.1	Barley	cytosol	0.0	0.0
KRG88966	Soybean	cytosol, plastid	0.0	0.0
KRH55005	Soybean	cytosol, plasma membrane	0.0	0.0
TraesCS1D01G171400.1	Wheat	cytosol	0.0	0.0

Protein Annotations

Gene3D:1.20.1130.10	MapMan:35.1	UniProt:A0A0R0IIE2	EMBL:ACUP02005850	EnsemblPlantsGene:GLYMA_09G144500	GO:GO:0003674
GO:GO:0003824	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0006464	GO:GO:0008150	GO:GO:0008152	GO:GO:0009507	GO:GO:0009522	GO:GO:0009535
GO:GO:0009536	GO:GO:0009579	GO:GO:0009987	GO:GO:0015979	GO:GO:0016020	GO:GO:0016021
GO:GO:0016168	GO:GO:0016491	GO:GO:0018298	GO:GO:0019538	GO:GO:0046872	GO:GO:0051536
GO:GO:0051539	GO:GO:0055114	InterPro:IPR036408	EnsemblPlants:KRH38575	ProteinID:KRH38575	ProteinID:KRH38575.1
PFAM:PF00223	InterPro:PSI_PsaA	InterPro:PSI_PsaA/B	InterPro:PSI_PsaA/B_sf	PANTHER:PTHR30128	PANTHER:PTHR30128:SF8
MetaCyc:PWY-101	SUPFAM:SSF81558	TMHMM:TMhelix	UniParc:UPI0006EDBEE2	:	:

Description

hypothetical protein

Coordinates

chr9:-:35847196..35847495

Molecular Weight (calculated)

10976.2 Da

IEP (calculated)

7.068

GRAVY (calculated)

0.329

Length

99 amino acids

Sequence
(BLAST)

1: MYFHGAHFFN YEAWLSDPTH IRPSAQVVWP IVGQEILNGN VGGGFQGIQL TSDFFQIGRT SGIISELQLY CTAIGALSFA ALMLFVGWFH YHKAAPKLA

Best Arabidopsis Sequence Match ( ATCG00350.1 )
(BLAST)

001: MIIRSPEPEV KILVDRDPIK TSFEEWAKPG HFSRTIAKGP DTTTWIWNLH ADAHDFDSHT SDLEEISRKV FSAHFGQLSI IFLWLSGMYF HGARFSNYEA
101: WLSDPTHIGP SAQVVWPIVG QEILNGDVGG GFRGIQITSG FFQIWRASGI TSELQLYCTA IGALVFAALM LFAGWFHYHK AAPKLAWFQD VESMLNHHLA
201: GLLGLGSLSW AGHQVHVSLP INQFLNAGVD PKEIPLPHEF ILNRDLLAQL YPSFAEGATP FFTLNWSKYS EFLTFRGGLD PVTGGLWLTD IAHHHLAIAI
301: LFLIAGHMYR TNWGIGHGIK DILEAHKGPF TGQGHKGLYE ILTTSWHAQL SLNLAMLGSL TIIVAHHMYS MPPYPYLATD YATQLSLFTH HMWIGGFLIV
401: GAAAHAAIFM VRDYDPTNRY NDLLDRVLRH RDAIISHLNW VCIFLGFHSF GLYIHNDTMS ALGRPQDMFS DTAIQLQPVF AQWIQNTHAL APGVTAPGET
501: ASTSLTWGGG ELVAVGGKVA LLPIPLGTAD FLVHHIHAFT IHVTVLILLK GVLFARSSRL IPDKANLGFR FPCDGPGRGG TCQVSAWDHV FLGLFWMYNA
601: ISVVIFHFSW KMQSDVWGSI SDQGVVTHIT GGNFAQSSIT INGWLRDFLW AQASQVIQSY GSSLSAYGLF FLGAHFVWAF SLMFLFSGRG YWQELIESIV
701: WAHNKLKVAP ATQPRALSII QGRAVGVTHY LLGGIATTWA FFLARIIAVG

Arabidopsis Description

PSAAPhotosystem I P700 chlorophyll a apoprotein A1 [Source:UniProtKB/Swiss-Prot;Acc:P56766]
SUBAcon: [plasma membrane,plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.