CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, cytosol

Predictor Summary:

plastid 2
cytosol 1
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 2
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, plasma membrane
Any Predictor:	cytosol, plastid, secretory
BaCelLo:	plastid
iPSORT:	plastid
MultiLoc:	cytosol
PProwler:	secretory
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400013730	Potato	plastid	90.22	35.93
HORVU2Hr1G022470.1	Barley	cytosol, plastid	19.57	34.62
HORVU4Hr1G045310.1	Barley	extracellular	90.22	22.8
KRH37800	Soybean	endoplasmic reticulum, plasma membrane	45.65	22.7
HORVU3Hr1G004680.1	Barley	cytosol, plasma membrane, plastid	92.39	19.19
Solyc12g033040.1.1	Tomato	cytosol	33.7	16.76
Bra041122.1-P	Field mustard	cytosol, vacuole	92.39	15.57
TraesCS6B01G234800.1	Wheat	cytosol, plasma membrane, plastid	91.3	15.27
Zm00001d000272_P001	Maize	plastid	92.39	15.26
TraesCS1B01G163900.1	Wheat	cytosol, plasma membrane, plastid	88.04	14.75
CDY67706	Canola	plasma membrane, vacuole	92.39	14.63
TraesCS1B01G163800.1	Wheat	cytosol, plasma membrane, plastid	86.96	14.57
TraesCS6B01G208100.1	Wheat	golgi, plasma membrane, plastid	90.22	12.52
AGP50755	Barley	plastid	92.39	11.33
TraesCSU01G200900.1	Wheat	cytosol, plasma membrane, plastid	92.39	11.33
CAA33996	Rice	plasma membrane	92.39	11.33
TraesCS3B01G185500.1	Wheat	plastid	92.39	11.33
CDX80066	Canola	cytosol, plasma membrane, plastid	92.39	11.33
CDX99951	Canola	cytosol, plasma membrane, plastid	92.39	11.33
CDY15767	Canola	cytosol, plasma membrane, plastid	92.39	11.33
HORVU6Hr1G049200.2	Barley	cytosol, plasma membrane, plastid	92.39	11.33
CDY29455	Canola	cytosol, plasma membrane, plastid	92.39	11.33
TraesCS5D01G010900.1	Wheat	plastid	91.3	11.2
HORVU5Hr1G064640.2	Barley	cytosol, plasma membrane, plastid	91.3	11.2
KRG88966	Soybean	cytosol, plastid	8.7	6.45
KRH49261	Soybean	cytosol, mitochondrion	0.0	0.0
KRH38575	Soybean	cytosol, plasma membrane, plastid	0.0	0.0
CDY67707	Canola	cytosol	0.0	0.0

Protein Annotations

Gene3D:1.20.1130.10	MapMan:35.1	UniProt:A0A0R0JKL7	EMBL:ACUP02003677	EnsemblPlantsGene:GLYMA_06G224500	GO:GO:0003674
GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0008150	GO:GO:0008152
GO:GO:0009522	GO:GO:0009579	GO:GO:0009987	GO:GO:0015979	GO:GO:0016020	GO:GO:0016021
GO:GO:0046872	InterPro:IPR036408	EnsemblPlants:KRH55005	ProteinID:KRH55005	ProteinID:KRH55005.1	PFAM:PF00223
PRINTS:PR00257	InterPro:PSI_PsaA	InterPro:PSI_PsaA/B	InterPro:PSI_PsaA/B_sf	PANTHER:PTHR30128	PANTHER:PTHR30128:SF8
MetaCyc:PWY-101	SUPFAM:SSF81558	TMHMM:TMhelix	UniParc:UPI0006EE153B	:	:

Description

hypothetical protein

Coordinates

chr6:-:30433702..30433980

Molecular Weight (calculated)

10587.9 Da

IEP (calculated)

7.801

GRAVY (calculated)

0.249

Length

92 amino acids

Sequence
(BLAST)

1: GSLTIVVAHH MYSMPPYPYL ATDYGTQLSL FTHHMWIGGF LIVGAAAHAT IFMVRDYDPT IRYNDILDRV LRHRDAIISH LNWVCIFLAQ QK

Best Arabidopsis Sequence Match ( ATCG00350.1 )
(BLAST)

001: MIIRSPEPEV KILVDRDPIK TSFEEWAKPG HFSRTIAKGP DTTTWIWNLH ADAHDFDSHT SDLEEISRKV FSAHFGQLSI IFLWLSGMYF HGARFSNYEA
101: WLSDPTHIGP SAQVVWPIVG QEILNGDVGG GFRGIQITSG FFQIWRASGI TSELQLYCTA IGALVFAALM LFAGWFHYHK AAPKLAWFQD VESMLNHHLA
201: GLLGLGSLSW AGHQVHVSLP INQFLNAGVD PKEIPLPHEF ILNRDLLAQL YPSFAEGATP FFTLNWSKYS EFLTFRGGLD PVTGGLWLTD IAHHHLAIAI
301: LFLIAGHMYR TNWGIGHGIK DILEAHKGPF TGQGHKGLYE ILTTSWHAQL SLNLAMLGSL TIIVAHHMYS MPPYPYLATD YATQLSLFTH HMWIGGFLIV
401: GAAAHAAIFM VRDYDPTNRY NDLLDRVLRH RDAIISHLNW VCIFLGFHSF GLYIHNDTMS ALGRPQDMFS DTAIQLQPVF AQWIQNTHAL APGVTAPGET
501: ASTSLTWGGG ELVAVGGKVA LLPIPLGTAD FLVHHIHAFT IHVTVLILLK GVLFARSSRL IPDKANLGFR FPCDGPGRGG TCQVSAWDHV FLGLFWMYNA
601: ISVVIFHFSW KMQSDVWGSI SDQGVVTHIT GGNFAQSSIT INGWLRDFLW AQASQVIQSY GSSLSAYGLF FLGAHFVWAF SLMFLFSGRG YWQELIESIV
701: WAHNKLKVAP ATQPRALSII QGRAVGVTHY LLGGIATTWA FFLARIIAVG

Arabidopsis Description

PSAAPhotosystem I P700 chlorophyll a apoprotein A1 [Source:UniProtKB/Swiss-Prot;Acc:P56766]
SUBAcon: [plasma membrane,plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.