CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, vacuole

Predictor Summary:

nucleus 1
cytosol 1
mitochondrion 2
extracellular 1
endoplasmic reticulum 1
vacuole 2
plasma membrane 2
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane, vacuole
Any Predictor:	cytosol, mitochondrion, nucleus, secretory
BaCelLo:	nucleus
MultiLoc:	cytosol
Predotar:	mitochondrion
PProwler:	mitochondrion
TargetP:	secretory
WoLF PSORT:	plasma membrane
YLoc:	vacuole

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d000272_P001	Maize	plastid	92.25	96.23
CDY43223	Canola	extracellular	24.78	96.0
Bra041122.1-P	Field mustard	cytosol, vacuole	90.19	95.97
HORVU3Hr1G004680.1	Barley	cytosol, plasma membrane, plastid	73.15	95.94
HORVU2Hr1G022470.1	Barley	cytosol, plastid	8.43	94.23
KRH55005	Soybean	cytosol, plasma membrane	14.63	92.39
TraesCS1B01G163900.1	Wheat	cytosol, plasma membrane, plastid	84.51	89.44
PGSC0003DMT400013730	Potato	plastid	35.46	89.18
Solyc12g033040.1.1	Tomato	cytosol	26.85	84.32
CDX99951	Canola	cytosol, plasma membrane, plastid	100.0	77.47
CDY29455	Canola	cytosol, plasma membrane, plastid	100.0	77.47
CDY15767	Canola	cytosol, plasma membrane, plastid	100.0	77.47
CDX80066	Canola	cytosol, plasma membrane, plastid	100.0	77.47
HORVU6Hr1G049200.2	Barley	cytosol, plasma membrane, plastid	97.07	75.2
AGP50755	Barley	plastid	97.07	75.2
HORVU5Hr1G064640.2	Barley	cytosol, plasma membrane, plastid	96.39	74.67
TraesCS3B01G185500.1	Wheat	plastid	95.87	74.27
TraesCS5D01G010900.1	Wheat	plastid	95.87	74.27
TraesCSU01G200900.1	Wheat	cytosol, plasma membrane, plastid	95.87	74.27
CAA33996	Rice	plasma membrane	95.7	74.13
HORVU4Hr1G045310.1	Barley	extracellular	43.89	70.05
CDY29456	Canola	cytosol, endoplasmic reticulum, vacuole	34.6	29.82
CDY15768	Canola	cytosol, endoplasmic reticulum, vacuole	34.6	29.82
CDX99952	Canola	cytosol, endoplasmic reticulum, vacuole	34.6	29.82
CDY39485	Canola	mitochondrion, plastid	21.86	18.73
CDY67707	Canola	cytosol	0.0	0.0

Protein Annotations

MapMan:1.1.4.2.1	Gene3D:1.20.1130.10	GO:A0A078JPS1	UniProt:A0A078JPS1	EnsemblPlants:CDY67706	ProteinID:CDY67706
ProteinID:CDY67706.1	GO:GO:0003674	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0008150	GO:GO:0008152	GO:GO:0009522	GO:GO:0009579	GO:GO:0009987	GO:GO:0015979
GO:GO:0016020	GO:GO:0016021	GO:GO:0046872	EnsemblPlantsGene:GSBRNA2T00066038001	InterPro:IPR036408	PFAM:PF00223
PRINTS:PR00257	ScanProsite:PS00419	InterPro:PSI_PsaA	InterPro:PSI_PsaA/B	InterPro:PSI_PsaA/B_CS	InterPro:PSI_PsaA/B_sf
PANTHER:PTHR30128	PANTHER:PTHR30128:SF8	MetaCyc:PWY-101	SUPFAM:SSF81558	TIGRFAMs:TIGR01335	TMHMM:TMhelix
UniParc:UPI0004EDB498	SEG:seg	:	:	:	:

Description

BnaUnng02400DBnaUnng02400D protein [Source:UniProtKB/TrEMBL;Acc:A0A078JPS1]

Coordinates

chrLK036416:-:1713..3458

Molecular Weight (calculated)

64319.8 Da

IEP (calculated)

7.615

GRAVY (calculated)

0.304

Length

581 amino acids

Sequence
(BLAST)

001: MLFAGWFHYH KAAPKLAWFQ DVESMLNHHL AGLLGLGSLS WAGHQVHVSL PINQFLNAGV DPKEIPLPHE FILNRDLLAQ LYPSFAEGAT PFFTLNWSKY
101: SDFLTFRGGL DPVTGGLWLT DTAHHHLAIA ILFLIAGHMY RTNWGIGHGL KDILEAHKGP FTGQGHKGLY EILTTSWHAQ LSLNLAMLGS LTIVVAHHMY
201: SMPPYPYLAT DYATQLSLFT HHMWIGGFLI VGAAAHAAIF MVRDYDPTNR YNDLLDRVLR HRDAIISHLN WVCIFLGFHS FGLYIHNDTM SALGRPQDMF
301: SDTAIQLQPV FAQWIQNTHA LAPGVTAPGE TASTSLTWGG GELVAVGGKV ALLPIPLGTA DFLVHHIHAF TIHVTVLILL KGVLFARSSR LIPDKANLGF
401: RFPCDGPGRG GTCQVSAWDH VFLGLFWMYN SISVVIFHFS WKMQSDVWGS ISDQGVVTHI TGGNFAQSSI TINGWLRDFL WAQASQVIQS YGSSLSAYGL
501: FFLGAHFVWA FSLMFLFSGR GYWQELIESI VWAHNKLKVA PATQPRALSI VQGRAVGVTH YLLGGIATTW AFFLARIIAV G

Best Arabidopsis Sequence Match ( ATCG00350.1 )
(BLAST)

001: MIIRSPEPEV KILVDRDPIK TSFEEWAKPG HFSRTIAKGP DTTTWIWNLH ADAHDFDSHT SDLEEISRKV FSAHFGQLSI IFLWLSGMYF HGARFSNYEA
101: WLSDPTHIGP SAQVVWPIVG QEILNGDVGG GFRGIQITSG FFQIWRASGI TSELQLYCTA IGALVFAALM LFAGWFHYHK AAPKLAWFQD VESMLNHHLA
201: GLLGLGSLSW AGHQVHVSLP INQFLNAGVD PKEIPLPHEF ILNRDLLAQL YPSFAEGATP FFTLNWSKYS EFLTFRGGLD PVTGGLWLTD IAHHHLAIAI
301: LFLIAGHMYR TNWGIGHGIK DILEAHKGPF TGQGHKGLYE ILTTSWHAQL SLNLAMLGSL TIIVAHHMYS MPPYPYLATD YATQLSLFTH HMWIGGFLIV
401: GAAAHAAIFM VRDYDPTNRY NDLLDRVLRH RDAIISHLNW VCIFLGFHSF GLYIHNDTMS ALGRPQDMFS DTAIQLQPVF AQWIQNTHAL APGVTAPGET
501: ASTSLTWGGG ELVAVGGKVA LLPIPLGTAD FLVHHIHAFT IHVTVLILLK GVLFARSSRL IPDKANLGFR FPCDGPGRGG TCQVSAWDHV FLGLFWMYNA
601: ISVVIFHFSW KMQSDVWGSI SDQGVVTHIT GGNFAQSSIT INGWLRDFLW AQASQVIQSY GSSLSAYGLF FLGAHFVWAF SLMFLFSGRG YWQELIESIV
701: WAHNKLKVAP ATQPRALSII QGRAVGVTHY LLGGIATTWA FFLARIIAVG

Arabidopsis Description

PSAAPhotosystem I P700 chlorophyll a apoprotein A1 [Source:UniProtKB/Swiss-Prot;Acc:P56766]
SUBAcon: [plasma membrane,plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.