Factsheet for Bra041122.1-P

Subcellular Localization

min:

: max

Winner_takes_all: vacuole, cytosol

Predictor Summary:

nucleus 1
plastid 2
cytosol 2
mitochondrion 2
extracellular 1
endoplasmic reticulum 1
vacuole 2
plasma membrane 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, vacuole
Any Predictor:	cytosol, mitochondrion, nucleus, plastid, secretory
BaCelLo:	nucleus
EpiLoc:	plastid
MultiLoc:	cytosol
Plant-mPloc:	plastid
Predotar:	mitochondrion
PProwler:	mitochondrion
TargetP:	secretory
WoLF PSORT:	cytosol
YLoc:	vacuole

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU2Hr1G022470.1	Barley	cytosol, plastid	9.16	96.15
KRH55005	Soybean	cytosol, plasma membrane	15.57	92.39
Zm00001d000272_P001	Maize	plastid	92.86	91.02
CDY67706	Canola	plasma membrane, vacuole	95.97	90.19
HORVU3Hr1G004680.1	Barley	cytosol, plasma membrane, plastid	72.53	89.39
PGSC0003DMT400013730	Potato	plastid	37.18	87.88
TraesCS1B01G163900.1	Wheat	cytosol, plasma membrane, plastid	85.71	85.25
Solyc12g033040.1.1	Tomato	cytosol	28.21	83.24
HORVU4Hr1G045310.1	Barley	extracellular	48.17	72.25
AGP50755	Barley	plastid	98.9	72.0
HORVU6Hr1G049200.2	Barley	cytosol, plasma membrane, plastid	98.9	72.0
HORVU5Hr1G064640.2	Barley	cytosol, plasma membrane, plastid	98.35	71.6
TraesCS5D01G010900.1	Wheat	plastid	97.8	71.2
TraesCS3B01G185500.1	Wheat	plastid	97.62	71.07
TraesCSU01G200900.1	Wheat	cytosol, plasma membrane, plastid	97.62	71.07
CAA33996	Rice	plasma membrane	96.7	70.4
CDY29455	Canola	cytosol, plasma membrane, plastid	95.97	69.87
CDY15767	Canola	cytosol, plasma membrane, plastid	95.97	69.87
CDX99951	Canola	cytosol, plasma membrane, plastid	95.97	69.87
CDX80066	Canola	cytosol, plasma membrane, plastid	95.97	69.87
CDY67707	Canola	cytosol	0.0	0.0

Protein Annotations

MapMan:1.1.4.2.1	Gene3D:1.20.1130.10	EnsemblPlantsGene:Bra041122	EnsemblPlants:Bra041122.1	EnsemblPlants:Bra041122.1-P	GO:GO:0003674
GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0008150	GO:GO:0008152
GO:GO:0009522	GO:GO:0009579	GO:GO:0009987	GO:GO:0015979	GO:GO:0016020	GO:GO:0016021
GO:GO:0046872	InterPro:IPR036408	UniProt:M4FJ42	PFAM:PF00223	PRINTS:PR00257	ScanProsite:PS00419
InterPro:PSI_PsaA	InterPro:PSI_PsaA/B	InterPro:PSI_PsaA/B_CS	InterPro:PSI_PsaA/B_sf	PANTHER:PTHR30128	PANTHER:PTHR30128:SF8
SUPFAM:SSF81558	TIGRFAMs:TIGR01335	TMHMM:TMhelix	UniParc:UPI000253ED2F	SEG:seg	:

Description

ATCG00350 (E=6e-307) PSAA | Encodes psaA protein comprising the reaction center for photosystem I along with psaB protein; hydrophobic protein encoded by the chloroplast genome.

Coordinates

chrScaffold000630:-:112..1752

Molecular Weight (calculated)

60652.4 Da

IEP (calculated)

7.155

GRAVY (calculated)

0.291

Length

546 amino acids

Sequence
(BLAST)

001: MLFAGWFHYH KAAPKLAWFQ DVESMLNHHL AGLLGLGSLS WAGHQIHVSL PINQFLDAGV DPKEIPLPHE FILNRDLLAQ LYPSFAEGAT PFFTLNWSKY
101: AEFLTFRGGL DPVTGGLWLT DIAHHHLAIA ILFLIAGHMY RTNWGIGHGL KDILEAHKGP FTGQGHKGLY EILTTSWHAQ LSLNLAMLGS TTIVVAHHMY
201: SMPPYPYLAT DYGTQLSLFT HHMWIGGFLI VGAAAHAAIF MVRDYDPTTR YNDLLDRVLR HRDAIISHLN WVCIFLGFHS FGLYIHNDTM SALGRPQDMF
301: SDTAIQLQPI FAQWVQNIHA TAPGVTAPGA TTSTSLTWGG GELVAVGGKV ALLPIPLGTA DFLVHHIHAF TIHVTVLILL KGVLFARSSR LIPDKANLGF
401: RFPCDGPGRG GTCQVSAWDH VFLGLFWMYN AISVVIFHFS WKMQSDVWGT ISDQGVVTHI TGGNFAQSSI TINGWLRDFL WAQASQVIQS YGSSLSAYGL
501: FFLGAHFVWA FSLMFLFSGR GYWQELIESI VWAHNKLKVA LLSLEP

Best Arabidopsis Sequence Match ( ATCG00350.1 )
(BLAST)

001: MIIRSPEPEV KILVDRDPIK TSFEEWAKPG HFSRTIAKGP DTTTWIWNLH ADAHDFDSHT SDLEEISRKV FSAHFGQLSI IFLWLSGMYF HGARFSNYEA
101: WLSDPTHIGP SAQVVWPIVG QEILNGDVGG GFRGIQITSG FFQIWRASGI TSELQLYCTA IGALVFAALM LFAGWFHYHK AAPKLAWFQD VESMLNHHLA
201: GLLGLGSLSW AGHQVHVSLP INQFLNAGVD PKEIPLPHEF ILNRDLLAQL YPSFAEGATP FFTLNWSKYS EFLTFRGGLD PVTGGLWLTD IAHHHLAIAI
301: LFLIAGHMYR TNWGIGHGIK DILEAHKGPF TGQGHKGLYE ILTTSWHAQL SLNLAMLGSL TIIVAHHMYS MPPYPYLATD YATQLSLFTH HMWIGGFLIV
401: GAAAHAAIFM VRDYDPTNRY NDLLDRVLRH RDAIISHLNW VCIFLGFHSF GLYIHNDTMS ALGRPQDMFS DTAIQLQPVF AQWIQNTHAL APGVTAPGET
501: ASTSLTWGGG ELVAVGGKVA LLPIPLGTAD FLVHHIHAFT IHVTVLILLK GVLFARSSRL IPDKANLGFR FPCDGPGRGG TCQVSAWDHV FLGLFWMYNA
601: ISVVIFHFSW KMQSDVWGSI SDQGVVTHIT GGNFAQSSIT INGWLRDFLW AQASQVIQSY GSSLSAYGLF FLGAHFVWAF SLMFLFSGRG YWQELIESIV
701: WAHNKLKVAP ATQPRALSII QGRAVGVTHY LLGGIATTWA FFLARIIAVG

Arabidopsis Description

PSAAPhotosystem I P700 chlorophyll a apoprotein A1 [Source:UniProtKB/Swiss-Prot;Acc:P56766]
SUBAcon: [plasma membrane,plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.