Factsheet for HORVU2Hr1G022470.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid, cytosol

Predictor Summary:

mitochondrion 1
cytosol 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, plastid
Any Predictor:	cytosol, mitochondrion, plastid
iPSORT:	mitochondrion
MultiLoc:	cytosol
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400013730	Potato	plastid	94.23	21.21
KRH55005	Soybean	cytosol, plasma membrane	34.62	19.57
HORVU0Hr1G029730.1	Barley	endoplasmic reticulum	40.38	16.28
HORVU4Hr1G045310.1	Barley	extracellular	96.15	13.74
HORVU3Hr1G004680.1	Barley	cytosol, plasma membrane, plastid	94.23	11.06
Bra041122.1-P	Field mustard	cytosol, vacuole	96.15	9.16
CDY67706	Canola	plasma membrane, vacuole	94.23	8.43
AGP50755	Barley	plastid	96.15	6.67
HORVU6Hr1G049200.2	Barley	cytosol, plasma membrane, plastid	96.15	6.67
HORVU5Hr1G064640.2	Barley	cytosol, plasma membrane, plastid	96.15	6.67
CAA33996	Rice	plasma membrane	96.15	6.67
CDY29455	Canola	cytosol, plasma membrane, plastid	94.23	6.53
CDY15767	Canola	cytosol, plasma membrane, plastid	94.23	6.53
CDX99951	Canola	cytosol, plasma membrane, plastid	94.23	6.53
CDX80066	Canola	cytosol, plasma membrane, plastid	94.23	6.53
HORVU1Hr1G038010.4	Barley	plastid	50.0	5.98
HORVU3Hr1G004700.1	Barley	plastid	51.92	5.96
HORVU5Hr1G064630.2	Barley	plastid	50.0	5.59
HORVU4Hr1G045300.1	Barley	cytosol	51.92	4.81
HORVU6Hr1G049190.1	Barley	golgi, mitochondrion, peroxisome, plasma membrane	51.92	3.68
AGP50754	Barley	plastid	51.92	3.68
CDY67707	Canola	cytosol	0.0	0.0
HORVU0Hr1G034550.1	Barley	cytosol	0.0	0.0
HORVU4Hr1G045260.1	Barley	cytosol	0.0	0.0
HORVU6Hr1G037020.1	Barley	plastid	0.0	0.0
Solyc12g033040.1.1	Tomato	cytosol	0.0	0.0

Protein Annotations

Gene3D:1.20.1130.10	MapMan:35.1	UniProt:A0A287HCG7	GO:GO:0003674	GO:GO:0005488	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0008150	GO:GO:0008152	GO:GO:0009522	GO:GO:0009579
GO:GO:0009987	GO:GO:0015979	GO:GO:0016020	GO:GO:0016021	GO:GO:0046872	EnsemblPlantsGene:HORVU2Hr1G022470
EnsemblPlants:HORVU2Hr1G022470.1	InterPro:IPR036408	PFAM:PF00223	InterPro:PSI_PsaA	InterPro:PSI_PsaA/B	InterPro:PSI_PsaA/B_sf
PANTHER:PTHR30128	PANTHER:PTHR30128:SF8	SUPFAM:SSF81558	UniParc:UPI000B483CF2	:	:

Description

No Description!

Coordinates

chrchr2H:-:65334751..65334906

Molecular Weight (calculated)

5797.0 Da

IEP (calculated)

7.897

GRAVY (calculated)

-0.223

Length

52 amino acids

Sequence
(BLAST)

1: AHKGPFTGQD HKGLYEILTT SWHAQLSLNP AMLGSTTIVV AHHMYSMPPY PY

Best Arabidopsis Sequence Match ( ATCG00350.1 )
(BLAST)

001: MIIRSPEPEV KILVDRDPIK TSFEEWAKPG HFSRTIAKGP DTTTWIWNLH ADAHDFDSHT SDLEEISRKV FSAHFGQLSI IFLWLSGMYF HGARFSNYEA
101: WLSDPTHIGP SAQVVWPIVG QEILNGDVGG GFRGIQITSG FFQIWRASGI TSELQLYCTA IGALVFAALM LFAGWFHYHK AAPKLAWFQD VESMLNHHLA
201: GLLGLGSLSW AGHQVHVSLP INQFLNAGVD PKEIPLPHEF ILNRDLLAQL YPSFAEGATP FFTLNWSKYS EFLTFRGGLD PVTGGLWLTD IAHHHLAIAI
301: LFLIAGHMYR TNWGIGHGIK DILEAHKGPF TGQGHKGLYE ILTTSWHAQL SLNLAMLGSL TIIVAHHMYS MPPYPYLATD YATQLSLFTH HMWIGGFLIV
401: GAAAHAAIFM VRDYDPTNRY NDLLDRVLRH RDAIISHLNW VCIFLGFHSF GLYIHNDTMS ALGRPQDMFS DTAIQLQPVF AQWIQNTHAL APGVTAPGET
501: ASTSLTWGGG ELVAVGGKVA LLPIPLGTAD FLVHHIHAFT IHVTVLILLK GVLFARSSRL IPDKANLGFR FPCDGPGRGG TCQVSAWDHV FLGLFWMYNA
601: ISVVIFHFSW KMQSDVWGSI SDQGVVTHIT GGNFAQSSIT INGWLRDFLW AQASQVIQSY GSSLSAYGLF FLGAHFVWAF SLMFLFSGRG YWQELIESIV
701: WAHNKLKVAP ATQPRALSII QGRAVGVTHY LLGGIATTWA FFLARIIAVG

Arabidopsis Description

PSAAPhotosystem I P700 chlorophyll a apoprotein A1 [Source:UniProtKB/Swiss-Prot;Acc:P56766]
SUBAcon: [plasma membrane,plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.