Factsheet for HORVU4Hr1G045300.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

mitochondrion 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion
iPSORT:	mitochondrion
MultiLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
HORVU5Hr1G022750.1	plastid

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
ATCG00340.1	HORVU5Hr1G022750.1	AT4G15510.1	23221595
ATCG00340.1	HORVU5Hr1G022750.1	AT4G15510.1	23221595

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU0Hr1G029730.1	Barley	endoplasmic reticulum	16.58	72.09
HORVU2Hr1G022470.1	Barley	cytosol, plastid	4.81	51.92
HORVU4Hr1G045310.1	Barley	extracellular	33.33	51.37
HORVU1Hr1G038010.4	Barley	plastid	28.52	36.78
HORVU5Hr1G064630.2	Barley	plastid	29.77	35.91
HORVU3Hr1G004700.1	Barley	plastid	28.88	35.76
Solyc12g032980.1.1	Tomato	nucleus	8.02	34.35
AGP50754	Barley	plastid	36.01	27.52
HORVU6Hr1G049190.1	Barley	golgi, mitochondrion, peroxisome, plasma membrane	36.01	27.52
CAA33995	Rice	plasma membrane	35.65	27.25
ATCG00340.1	Thale cress	golgi, mitochondrion, plasma membrane, plastid	35.29	26.98
TraesCS1D01G181100.1	Wheat	golgi, mitochondrion, peroxisome, plasma membrane	34.94	26.74
Solyc12g032990.1.1	Tomato	plastid	8.02	24.86
HORVU3Hr1G004680.1	Barley	cytosol, plasma membrane, plastid	16.58	20.99
HORVU5Hr1G064640.2	Barley	cytosol, plasma membrane, plastid	21.21	15.87
HORVU6Hr1G049200.2	Barley	cytosol, plasma membrane, plastid	21.21	15.87
AGP50755	Barley	plastid	21.21	15.87
GSMUA_AchrUn_...	Banana	cytosol, golgi	53.12	5.7
HORVU4Hr1G045260.1	Barley	cytosol	1.25	5.11
HORVU6Hr1G037020.1	Barley	plastid	0.89	2.27
HORVU0Hr1G034550.1	Barley	cytosol	0.0	0.0

Protein Annotations

Gene3D:1.20.1130.10	MapMan:35.1	UniProt:A0A287NWX3	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0008150	GO:GO:0008152	GO:GO:0009522	GO:GO:0009579	GO:GO:0009987	GO:GO:0015979
GO:GO:0016020	GO:GO:0016021	EnsemblPlantsGene:HORVU4Hr1G045300	EnsemblPlants:HORVU4Hr1G045300.1	InterPro:IPR036408	PFAM:PF00223
PRINTS:PR00257	InterPro:PSI_PsaA/B	InterPro:PSI_PsaA/B_sf	PANTHER:PTHR30128	PANTHER:PTHR30128:SF4	SUPFAM:SSF81558
TMHMM:TMhelix	UniParc:UPI000B46F1CD	SEG:seg	:	:	:

Description

No Description!

Coordinates

chrchr4H:+:361473850..361478893

Molecular Weight (calculated)

30373.6 Da

IEP (calculated)

7.582

GRAVY (calculated)

0.032

Length

561 amino acids

Sequence
(BLAST)

001: XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXS
101: TTQMETKPFV VQKRGISSQS SFVRTFRGGS TFDGIICHPQ TQSLWLTDMA HHHLAIAFIF LIAGHMYRTN FGIGHSIKDL LEAHTPPGGR LGRGHKGLYD
201: TINNSIHFQL GLALASLGVI TSLVAQHMYS LPPYAFIAQD FTTQAALYTH HQYIAGFIMT GAFAHGAIFF IRDYNPEQNE DNVLARMLDL KEAIISHLKF
301: XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX
401: XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXLRDYL
501: WLNSSQLING YNPFGMNSLS VWAWMFLFGH LVWATGFMFL ISWRGYWQEL IETLAWAHER D

Best Arabidopsis Sequence Match ( ATCG00340.1 )
(BLAST)

001: MALRFPRFSQ GLAQDPTTRR IWFGIATAHD FESHDDITEE RLYQNIFASH FGQLAIIFLW TSGNLFHVAW QGNFETWVQD PLHVRPIAHA IWDPHFGQPA
101: VEAFTRGGAL GPVNIAYSGV YQWWYTIGLR TNEDLYTGAL FLLFLSALSL IGGWLHLQPK WKPRVSWFKN AESRLNHHLS GLFGVSSLAW TGHLVHVAIP
201: ASRGEYVRWN NFLNVLPHPQ GLGPLFTGQW NLYAQNPDSS SHLFGTSQGS GTAILTLLGG FHPQTQSLWL TDMAHHHLAI AILFLIAGHM YRTNFGIGHS
301: IKDLLEAHIP PGGRLGRGHK GLYDTINNSI HFQLGLALAS LGVITSLVAQ HMYSLPAYAF IAQDFTTQAA LYTHHQYIAG FIMTGAFAHG AIFFIRDYNP
401: EQNEDNVLAR MLDHKEAIIS HLSWASLFLG FHTLGLYVHN DVMLAFGTPE KQILIEPIFA QWIQSAHGKT SYGFDVLLSS TSGPAFNAGR SIWLPGWLNA
501: INENSNSLFL TIGPGDFLVH HAIALGLHTT TLILVKGALD ARGSKLMPDK KDFGYSFPCD GPGRGGTCDI SAWDAFYLAV FWMLNTIGWV TFYWHWKHIT
601: LWQGNVSQFN ESSTYLMGWL RDYLWLNSSQ LINGYNPFGM NSLSVWAWMF LFGHLVWATG FMFLISWRGY WQELIETLAW AHERTPLANL IRWKDKPVAL
701: SIVQARLVGL AHFSVGYIFT YAAFLIASTS GKFG

Arabidopsis Description

PSABPhotosystem I P700 chlorophyll a apoprotein A2 [Source:UniProtKB/TrEMBL;Acc:A0A1B1W4U2]
SUBAcon: [mitochondrion,plasma membrane,golgi,plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.