Factsheet for HORVU4Hr1G045310.1

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 3
golgi 2
plasma membrane 2
endoplasmic reticulum 2
vacuole 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	secretory
MultiLoc:	extracellular
Predotar:	secretory
TargetP:	secretory

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU2Hr1G022470.1	Barley	cytosol, plastid	13.74	96.15
KRH55005	Soybean	cytosol, plasma membrane	22.8	90.22
PGSC0003DMT400013730	Potato	plastid	40.66	64.07
Bra041122.1-P	Field mustard	cytosol, vacuole	72.25	48.17
CDY67706	Canola	plasma membrane, vacuole	70.05	43.89
TraesCS1B01G163900.1	Wheat	cytosol, plasma membrane, plastid	65.66	43.53
HORVU0Hr1G029730.1	Barley	endoplasmic reticulum	12.91	36.43
AGP50755	Barley	plastid	72.25	35.07
HORVU6Hr1G049200.2	Barley	cytosol, plasma membrane, plastid	72.25	35.07
HORVU5Hr1G064640.2	Barley	cytosol, plasma membrane, plastid	71.98	34.93
CAA33996	Rice	plasma membrane	70.88	34.4
CDY29455	Canola	cytosol, plasma membrane, plastid	70.05	34.0
CDX99951	Canola	cytosol, plasma membrane, plastid	70.05	34.0
CDY15767	Canola	cytosol, plasma membrane, plastid	70.05	34.0
CDX80066	Canola	cytosol, plasma membrane, plastid	70.05	34.0
HORVU3Hr1G004680.1	Barley	cytosol, plasma membrane, plastid	40.66	33.41
HORVU4Hr1G045300.1	Barley	cytosol	51.37	33.33
HORVU3Hr1G004700.1	Barley	plastid	36.54	29.36
HORVU1Hr1G038010.4	Barley	plastid	32.42	27.13
HORVU5Hr1G064630.2	Barley	plastid	32.42	25.38
AGP50754	Barley	plastid	36.54	18.12
HORVU6Hr1G049190.1	Barley	golgi, mitochondrion, peroxisome, plasma membrane	36.54	18.12
Solyc12g033040.1.1	Tomato	cytosol	8.52	16.76
HORVU4Hr1G045260.1	Barley	cytosol	0.82	2.19
HORVU6Hr1G037020.1	Barley	plastid	0.0	0.0
HORVU0Hr1G034550.1	Barley	cytosol	0.0	0.0
CDY67707	Canola	cytosol	0.0	0.0

Protein Annotations

Gene3D:1.20.1130.10	MapMan:35.1	UniProt:A0A287NXM2	ncoils:Coil	GO:GO:0003674	GO:GO:0005488
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0008150	GO:GO:0008152	GO:GO:0009522
GO:GO:0009579	GO:GO:0009987	GO:GO:0015979	GO:GO:0016020	GO:GO:0016021	GO:GO:0046872
EnsemblPlantsGene:HORVU4Hr1G045310	EnsemblPlants:HORVU4Hr1G045310.1	InterPro:IPR036408	PFAM:PF00223	PRINTS:PR00257	InterPro:PSI_PsaA
InterPro:PSI_PsaA/B	InterPro:PSI_PsaA/B_sf	PANTHER:PTHR30128	PANTHER:PTHR30128:SF8	SUPFAM:SSF81558	SignalP:SignalP-noTM
TMHMM:TMhelix	UniParc:UPI000B471552	SEG:seg	:	:	:

Description

No Description!

Coordinates

chrchr4H:+:361474998..361479911

Molecular Weight (calculated)

29522.8 Da

IEP (calculated)

7.026

GRAVY (calculated)

0.155

Length

364 amino acids

Sequence
(BLAST)

001: MLNHHLAGLL GLGSLSWAGH QIHVSLPINQ FLDAGVDPKE IPLPHGFILN RDLLAQLYPS FAEGATPFFT LNWSKYAEFL TFRGGLDPVT GGLWLTDIAH
101: HHLAIAILFL IAGHMYRTNW GIGHGLKDIL EAHKGPFTGQ GHKGLYEILT TSWHAQLSLN LAMLGSTTIV VAHHMYSMPP YPYLATDYGT QLSLFTHHMW
201: IGGFLIVGAA AHAAIFMVRD YDPTTRYNDL LDRVLRHRDA IISHLNWVCI FLGFHSFGLY IHNDXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX
301: XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXX

Best Arabidopsis Sequence Match ( ATCG00340.1 )
(BLAST)

001: MALRFPRFSQ GLAQDPTTRR IWFGIATAHD FESHDDITEE RLYQNIFASH FGQLAIIFLW TSGNLFHVAW QGNFETWVQD PLHVRPIAHA IWDPHFGQPA
101: VEAFTRGGAL GPVNIAYSGV YQWWYTIGLR TNEDLYTGAL FLLFLSALSL IGGWLHLQPK WKPRVSWFKN AESRLNHHLS GLFGVSSLAW TGHLVHVAIP
201: ASRGEYVRWN NFLNVLPHPQ GLGPLFTGQW NLYAQNPDSS SHLFGTSQGS GTAILTLLGG FHPQTQSLWL TDMAHHHLAI AILFLIAGHM YRTNFGIGHS
301: IKDLLEAHIP PGGRLGRGHK GLYDTINNSI HFQLGLALAS LGVITSLVAQ HMYSLPAYAF IAQDFTTQAA LYTHHQYIAG FIMTGAFAHG AIFFIRDYNP
401: EQNEDNVLAR MLDHKEAIIS HLSWASLFLG FHTLGLYVHN DVMLAFGTPE KQILIEPIFA QWIQSAHGKT SYGFDVLLSS TSGPAFNAGR SIWLPGWLNA
501: INENSNSLFL TIGPGDFLVH HAIALGLHTT TLILVKGALD ARGSKLMPDK KDFGYSFPCD GPGRGGTCDI SAWDAFYLAV FWMLNTIGWV TFYWHWKHIT
601: LWQGNVSQFN ESSTYLMGWL RDYLWLNSSQ LINGYNPFGM NSLSVWAWMF LFGHLVWATG FMFLISWRGY WQELIETLAW AHERTPLANL IRWKDKPVAL
701: SIVQARLVGL AHFSVGYIFT YAAFLIASTS GKFG

Arabidopsis Description

PSABPhotosystem I P700 chlorophyll a apoprotein A2 [Source:UniProtKB/TrEMBL;Acc:A0A1B1W4U2]
SUBAcon: [plastid,golgi,plasma membrane,mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.